| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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Identifier: 51596506
GI number: 51596506
Start: 2565873
End: 2566877
Strand: Reverse
Name: add
Synonym: YPTB2180
Alternate gene names: 51596506
Gene position: 2566877-2565873 (Counterclockwise)
Preceding gene: 51596508
Following gene: 51596499
Centisome position: 54.1
GC content: 50.45
Gene sequence:
>1005_bases ATGATTGATCCTCGCCTTCCTCTGACCGACATTCATCGCCACCTTGATGGCAATATCCGAGCGCAAACCATTTTGGACTT GGGTCAACAATTTAATTTGAATTTACCGGCCAATGAGCTTGATACGCTGAGACCACACGTACAAATCACCAAGACCGAGC CAGATTTGGTCAGTTTCCTACAAAAGTTGGATTGGGGCGTTGCAGTTCTCGGATCACTGGATGCCTGTCGCCGAGTGGCT TATGAGAATGTCGAAGACGCAGCACATGCTGGTTTACATTATGCTGAACTCCGCTTTTCCCCGTTTTATATGGCGATGAA ACACCAACTACCGATTACCGGTGTTGTCGAAGCGGTTATTGATGGCATTGCGTCTGGTTGTCGCGATTTTAATATTGATA TCCGTTTGATCGGCATTCTCAGCCGCACCTTCGGTGAACAAGCGTGTTTGCAAGAACTTGATAGCTTGCTGGCCCATCGC GAAGGGATAACCGCGCTGGATTTAGCCGGTGACGAGTTAGGTTTTCCCGGTTCTCTGTTCCGCCGCCATTTTAATCGAGC GAGGGATGCGGGCCTACGTATTACCGTCCATGCGGGTGAAGCGGCCGGTCCGGAGAGTATCTGGCAAGCTATTCGTGAAC TGGGTGCTGAACGTATCGGCCACGGCGTTAAAGCCGTCGAAGACCGTAAGTTGATGGACTATCTGGCAGAACACAAAATA GGTATCGAATCCTGCCTGACCTCCAATATCCAAACCAGCACTGTAGTCTCTCTGGCAACCCATCCATTAGCAACCTTCCT ACGCCATGGCATCGTGGCATCAATTAACACTGATGACCCGGCGGTTCAGGGCATTGAAATTGCCAATGAATACCTTGTCG CTGCACCGGCTGCGGGGCTAACGCCGCATGAAATCCGCCAAGCACAAGCGAATGGCCTGGAAATGGCATTTATCAGCGAA CAAGAAAAGCAGGCACTGCGGGATAAAGTATTCCCTATTTCCTGA
Upstream 100 bases:
>100_bases TTTTTTATGTAACACTATGGATATTTTCATTCGTTTGTTTTTATAATATTCTGCACCTTATCTACCGAAATCTATCTTTG ATAAAAAGTGAGTGCACAGC
Downstream 100 bases:
>100_bases GGTACGATAGAACCCGAAGATACGATAAAATAAAAAAGCGCCCATACCCTAGAGTGGTACCGGCGCTTTCTATTTTCATC ACTAAGCCCTTTTTATCGCC
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MIDPRLPLTDIHRHLDGNIRAQTILDLGQQFNLNLPANELDTLRPHVQITKTEPDLVSFLQKLDWGVAVLGSLDACRRVA YENVEDAAHAGLHYAELRFSPFYMAMKHQLPITGVVEAVIDGIASGCRDFNIDIRLIGILSRTFGEQACLQELDSLLAHR EGITALDLAGDELGFPGSLFRRHFNRARDAGLRITVHAGEAAGPESIWQAIRELGAERIGHGVKAVEDRKLMDYLAEHKI GIESCLTSNIQTSTVVSLATHPLATFLRHGIVASINTDDPAVQGIEIANEYLVAAPAAGLTPHEIRQAQANGLEMAFISE QEKQALRDKVFPIS
Sequences:
>Translated_334_residues MIDPRLPLTDIHRHLDGNIRAQTILDLGQQFNLNLPANELDTLRPHVQITKTEPDLVSFLQKLDWGVAVLGSLDACRRVA YENVEDAAHAGLHYAELRFSPFYMAMKHQLPITGVVEAVIDGIASGCRDFNIDIRLIGILSRTFGEQACLQELDSLLAHR EGITALDLAGDELGFPGSLFRRHFNRARDAGLRITVHAGEAAGPESIWQAIRELGAERIGHGVKAVEDRKLMDYLAEHKI GIESCLTSNIQTSTVVSLATHPLATFLRHGIVASINTDDPAVQGIEIANEYLVAAPAAGLTPHEIRQAQANGLEMAFISE QEKQALRDKVFPIS >Mature_334_residues MIDPRLPLTDIHRHLDGNIRAQTILDLGQQFNLNLPANELDTLRPHVQITKTEPDLVSFLQKLDWGVAVLGSLDACRRVA YENVEDAAHAGLHYAELRFSPFYMAMKHQLPITGVVEAVIDGIASGCRDFNIDIRLIGILSRTFGEQACLQELDSLLAHR EGITALDLAGDELGFPGSLFRRHFNRARDAGLRITVHAGEAAGPESIWQAIRELGAERIGHGVKAVEDRKLMDYLAEHKI GIESCLTSNIQTSTVVSLATHPLATFLRHGIVASINTDDPAVQGIEIANEYLVAAPAAGLTPHEIRQAQANGLEMAFISE QEKQALRDKVFPIS
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=342, Percent_Identity=30.9941520467836, Blast_Score=142, Evalue=4e-34, Organism=Escherichia coli, GI1787910, Length=330, Percent_Identity=76.969696969697, Blast_Score=529, Evalue=1e-152, Organism=Caenorhabditis elegans, GI32565969, Length=338, Percent_Identity=30.4733727810651, Blast_Score=128, Evalue=5e-30, Organism=Caenorhabditis elegans, GI17538512, Length=338, Percent_Identity=30.4733727810651, Blast_Score=127, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6324188, Length=335, Percent_Identity=26.865671641791, Blast_Score=101, Evalue=1e-22, Organism=Drosophila melanogaster, GI24645260, Length=330, Percent_Identity=25.4545454545455, Blast_Score=108, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006650 - InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 36650; Mature: 36650
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00485 A_DEAMINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPRLPLTDIHRHLDGNIRAQTILDLGQQFNLNLPANELDTLRPHVQITKTEPDLVSFL CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEECCCHHHHHHH QKLDWGVAVLGSLDACRRVAYENVEDAAHAGLHYAELRFSPFYMAMKHQLPITGVVEAVI HHHCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHCCCHHHHHHHHCCCHHHHHHHHH DGIASGCRDFNIDIRLIGILSRTFGEQACLQELDSLLAHREGITALDLAGDELGFPGSLF HHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHH RRHFNRARDAGLRITVHAGEAAGPESIWQAIRELGAERIGHGVKAVEDRKLMDYLAEHKI HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC GIESCLTSNIQTSTVVSLATHPLATFLRHGIVASINTDDPAVQGIEIANEYLVAAPAAGL CHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHEECCCCCC TPHEIRQAQANGLEMAFISEQEKQALRDKVFPIS CHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCC >Mature Secondary Structure MIDPRLPLTDIHRHLDGNIRAQTILDLGQQFNLNLPANELDTLRPHVQITKTEPDLVSFL CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEECCCHHHHHHH QKLDWGVAVLGSLDACRRVAYENVEDAAHAGLHYAELRFSPFYMAMKHQLPITGVVEAVI HHHCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHCCCHHHHHHHHCCCHHHHHHHHH DGIASGCRDFNIDIRLIGILSRTFGEQACLQELDSLLAHREGITALDLAGDELGFPGSLF HHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHH RRHFNRARDAGLRITVHAGEAAGPESIWQAIRELGAERIGHGVKAVEDRKLMDYLAEHKI HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC GIESCLTSNIQTSTVVSLATHPLATFLRHGIVASINTDDPAVQGIEIANEYLVAAPAAGL CHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHEECCCCCC TPHEIRQAQANGLEMAFISEQEKQALRDKVFPIS CHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA