| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596508
Identifier: 51596508
GI number: 51596508
Start: 2568695
End: 2569624
Strand: Reverse
Name: 51596508
Synonym: YPTB2182
Alternate gene names: NA
Gene position: 2569624-2568695 (Counterclockwise)
Preceding gene: 51596510
Following gene: 51596506
Centisome position: 54.16
GC content: 49.35
Gene sequence:
>930_bases ATGACAAAAAAACGTTTACTAGATTGCTGTGCTTCCGATTTTGTTTCGATGGATAATGCAGAACTTCTGTATGCCATCCG CGCCAGTGAAGGCCGGGTAATGGTGAGTGAAACCATCGCGATTACTCAACCATTACTGAACAATGTTACCAATGCAGAAC TTGCCGCATCACAAGGCGCAGATATCTTACTGATTAATATGTTTGATTGCGAAAACCCTCAGATTCAGGGGCTGCCGGCA GATATTGCGCCGCAGCACATACTGCATGAGCTACAACGCCTGACGGGACGCGTTATTGGTGTGAATTTGGAGGCAGTTGA TCCTGAGTTTGCTGTCGCTCATAACGATATCTGGAGAATGAAACCAGGGCGCGCAGCAACTGCAGAAAACGCCCGTAAGC TGGTTGCTATGGGAGCGAAGATCCTGGTGCTTACCGGCAATCCCAATAATGGCGTCAGTAATCACGCTTTGGGAATGGCT GTAAGGGACATTCGTGATGCAGTTAAAGACAAAGCTGTCATCATCGCCGGAAAAATGCACGGGGCGGGAGTCGTACAGGA AAGCGGTAGTCACATTGTCAGCGAAGAGGATATTATCTGGTTCGCCTCACAGGGGGCCGATATTGTTTTACTTCCGGCAC CGGGAACGGTGCCCGGAATGAGCCAGCAGCGTGTAGCATCGCTTGTTGATACTGCTCATGGCCATGGCGTACTGGCAATG ACGGCCATAGGTACCTCTCAGGAAGGCGCAGACACCCATACAATTCGCCAGATAGCACTGATGAGTAAAATGGCAGGAGC AGATCTACATCATATTGGTGATACCGGTTACATGGGGATAGCATTACCGGAGAATATTCTTGCTTATAGCATAGTGATTC GCGGTGTGAGGCATACCTATGCCCGGGTTGCACGGTCAATTAATCGATAA
Upstream 100 bases:
>100_bases AGGACCTGATGCTGCCGATTGCCGTTTTACCGATAGCCGGTCTGCTACTACGATTAGGGCAACCATTCGTGAATTAGTTA ATCAATAAGGTAATGCTGTT
Downstream 100 bases:
>100_bases TAAATTTCGCCTTGAATAAGAAATATAACAGTGATTAATGAATGTACTGACAAAATGGCTTCAGTACAGCAACAATCCAG CGAAGGTTGCCAGGTTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTKKRLLDCCASDFVSMDNAELLYAIRASEGRVMVSETIAITQPLLNNVTNAELAASQGADILLINMFDCENPQIQGLPA DIAPQHILHELQRLTGRVIGVNLEAVDPEFAVAHNDIWRMKPGRAATAENARKLVAMGAKILVLTGNPNNGVSNHALGMA VRDIRDAVKDKAVIIAGKMHGAGVVQESGSHIVSEEDIIWFASQGADIVLLPAPGTVPGMSQQRVASLVDTAHGHGVLAM TAIGTSQEGADTHTIRQIALMSKMAGADLHHIGDTGYMGIALPENILAYSIVIRGVRHTYARVARSINR
Sequences:
>Translated_309_residues MTKKRLLDCCASDFVSMDNAELLYAIRASEGRVMVSETIAITQPLLNNVTNAELAASQGADILLINMFDCENPQIQGLPA DIAPQHILHELQRLTGRVIGVNLEAVDPEFAVAHNDIWRMKPGRAATAENARKLVAMGAKILVLTGNPNNGVSNHALGMA VRDIRDAVKDKAVIIAGKMHGAGVVQESGSHIVSEEDIIWFASQGADIVLLPAPGTVPGMSQQRVASLVDTAHGHGVLAM TAIGTSQEGADTHTIRQIALMSKMAGADLHHIGDTGYMGIALPENILAYSIVIRGVRHTYARVARSINR >Mature_308_residues TKKRLLDCCASDFVSMDNAELLYAIRASEGRVMVSETIAITQPLLNNVTNAELAASQGADILLINMFDCENPQIQGLPAD IAPQHILHELQRLTGRVIGVNLEAVDPEFAVAHNDIWRMKPGRAATAENARKLVAMGAKILVLTGNPNNGVSNHALGMAV RDIRDAVKDKAVIIAGKMHGAGVVQESGSHIVSEEDIIWFASQGADIVLLPAPGTVPGMSQQRVASLVDTAHGHGVLAMT AIGTSQEGADTHTIRQIALMSKMAGADLHHIGDTGYMGIALPENILAYSIVIRGVRHTYARVARSINR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32966; Mature: 32835
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKRLLDCCASDFVSMDNAELLYAIRASEGRVMVSETIAITQPLLNNVTNAELAASQGA CCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCHHHHCCCC DILLINMFDCENPQIQGLPADIAPQHILHELQRLTGRVIGVNLEAVDPEFAVAHNDIWRM CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCEEEECCCEEEE KPGRAATAENARKLVAMGAKILVLTGNPNNGVSNHALGMAVRDIRDAVKDKAVIIAGKMH CCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC GAGVVQESGSHIVSEEDIIWFASQGADIVLLPAPGTVPGMSQQRVASLVDTAHGHGVLAM CCCEEECCCCEEECCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEE TAIGTSQEGADTHTIRQIALMSKMAGADLHHIGDTGYMGIALPENILAYSIVIRGVRHTY EEECCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHH ARVARSINR HHHHHHHCC >Mature Secondary Structure TKKRLLDCCASDFVSMDNAELLYAIRASEGRVMVSETIAITQPLLNNVTNAELAASQGA CHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCHHHHCCCC DILLINMFDCENPQIQGLPADIAPQHILHELQRLTGRVIGVNLEAVDPEFAVAHNDIWRM CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCEEEECCCEEEE KPGRAATAENARKLVAMGAKILVLTGNPNNGVSNHALGMAVRDIRDAVKDKAVIIAGKMH CCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC GAGVVQESGSHIVSEEDIIWFASQGADIVLLPAPGTVPGMSQQRVASLVDTAHGHGVLAM CCCEEECCCCEEECCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEE TAIGTSQEGADTHTIRQIALMSKMAGADLHHIGDTGYMGIALPENILAYSIVIRGVRHTY EEECCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHH ARVARSINR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA