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The map label for this gene is araB

Identifier: 51596499

GI number: 51596499

Start: 2556317

End: 2558020

Strand: Reverse

Name: araB

Synonym: YPTB2173

Alternate gene names: 51596499

Gene position: 2558020-2556317 (Counterclockwise)

Preceding gene: 51596506

Following gene: 51596498

Centisome position: 53.91

GC content: 52.82

Gene sequence:

>1704_bases
ATGACAGGCAACGTGATATCGGCAGACGGTGCTATAGCTCTCGGGTTGGATTTCGGTAGCGATTCCGTCCGGGTATTGGC
GGTAGATTGTCAACATGGCACTGAGATCGATACGGAAGTGGTTTACTACCCACGTTGGAAGAAAGGTCTATATTGTCAGG
CCGCACAAAATCAGTTCCGCCACCATCCTCTCGACTATATTGAAGCGATGGAACAGGCCATCCGGCAGATGGTCAAGCGC
CTGTCAGAAGAACAACGTCAACATATTGTGGGTATTGGTGTCGACTCTACTGGATCGACGCCAGCGCCGATTGATGAGCA
AGGCCAAGTATTAGCTCTGCGCCCGGATTTTGCAGATAACCCCAATGCCATGTTTGTGTTGTGGAAAGATCACACTGCAA
TTGAGGAGGCCGAAGAAATTAACCGTTTATGCCGTAGCGGTGAATTTGCGGACTATTCACGCTATATCGGTGGGGTTTAT
TCCTCTGAGTGGTTCTGGGCAAAAATTCTACATGTCACCCGTGCTGATGTGGCTGTTCGTGAGGCGGCAGTGTCATGGAT
TGAGCTGTGTGACTGGGTACCGGCCCTCTTGTCTGGTACCACCGCACCGCAGGATATCCAGCGTGGCCGTTGCAGCGCCG
GACATAAAAGTTTATGGCACCCTTCATGGGGCGGATTACCCCCACGAGCGTTCCTCGCAGCATTAGATACCAGCCTGGTT
AATGATCTCGATTATCCCATGTTTACTGACACCTACACCGCCGAACGACCGGTAGGCCAGATCACCGCCGAGTGGGCTGA
GCGTCTGGGCTTACCAACGACGGTGATCCTTTCTGGTGGAGCATTTGATTGCCATATGGGGGCGGTGGGAGCCGGTGCTC
AACCTTATACATTGGTCAAAGTCATTGGCACGTCCACCTGCGATATCTTGATTGCCGATGACCAACGAGTGGGTGATCGG
GCTATCGCGGGTATCTGTGGCCAGGTTGAAGGCAGTGTATTGCCGGGTTGGATTGGCATGGAAGCGGGTCAATCTGCATT
CGGTGATATGTATGCATGGTTCAGCAATTTGTTGAGTTGGCCACTGCATCAAGCGGCATTGACCCAACCCGAATGGCAGC
CGCAGCTAAAACAGATCGAATCCAACCTACTCGCCTCATTGACCTGCGCATGGGCACAAAACCCGTCTCTCGATCATCTG
CCCGTGGTATTGGATTGGTTTAATGGCCGCCGAACCCCGAATGCTAATCAGCGTTTAAAAGGGGTGATTACCGATCTGAA
TCTGGGTACCGATGCACCAACCCTGTTTGGTGGTTTTATCGCTGCGACCGCCTTTGGTGCCCGCGCCATTATGGAATGTT
TTGAACAGCAAGATATCCCGGTTGAGAACGTGCTGGCATTGGGTGGAATTGCACGTAAATCGCCGGTGATCATGCAGGTT
TGTGCTGATGTCATGAATCGGCCACTACAGATTGTGGCATCTGATCAATGTTGTGCGCTGGGGGCGGCAATTTTTGCAGC
CGTTGCCGCAGGGGCACACGAGGATGTTCCCACCGCCCAACGCCACATGGCATGCAATATTGAGCGCACTCTGATTCCGG
ATCCCGTCCAGGTCGTGCGTTACCAGCAACTTTATCAACGCTATCAGCAGTGGTGTCATACGGCAGAGCCGCATTATGCG
CCAGTTACCAAGGCAATTCACTGA

Upstream 100 bases:

>100_bases
CATACTTCCAGCTATTGGCTCCTCACGTTTCCCCTCGGCTCACTCTTATGGTTATTGCCAATGAATTTCTGTTTTTTTTG
CATGATTAGGAGCAACCACC

Downstream 100 bases:

>100_bases
TATTGACAAGCAGTCTACTTTAACGACATTCACGATAACTGAATGTTTTATATCGAGTAATCGTTTATTAAATGGAGTGA
TAGATGGACGTATTCAAGCA

Product: ribulokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MTGNVISADGAIALGLDFGSDSVRVLAVDCQHGTEIDTEVVYYPRWKKGLYCQAAQNQFRHHPLDYIEAMEQAIRQMVKR
LSEEQRQHIVGIGVDSTGSTPAPIDEQGQVLALRPDFADNPNAMFVLWKDHTAIEEAEEINRLCRSGEFADYSRYIGGVY
SSEWFWAKILHVTRADVAVREAAVSWIELCDWVPALLSGTTAPQDIQRGRCSAGHKSLWHPSWGGLPPRAFLAALDTSLV
NDLDYPMFTDTYTAERPVGQITAEWAERLGLPTTVILSGGAFDCHMGAVGAGAQPYTLVKVIGTSTCDILIADDQRVGDR
AIAGICGQVEGSVLPGWIGMEAGQSAFGDMYAWFSNLLSWPLHQAALTQPEWQPQLKQIESNLLASLTCAWAQNPSLDHL
PVVLDWFNGRRTPNANQRLKGVITDLNLGTDAPTLFGGFIAATAFGARAIMECFEQQDIPVENVLALGGIARKSPVIMQV
CADVMNRPLQIVASDQCCALGAAIFAAVAAGAHEDVPTAQRHMACNIERTLIPDPVQVVRYQQLYQRYQQWCHTAEPHYA
PVTKAIH

Sequences:

>Translated_567_residues
MTGNVISADGAIALGLDFGSDSVRVLAVDCQHGTEIDTEVVYYPRWKKGLYCQAAQNQFRHHPLDYIEAMEQAIRQMVKR
LSEEQRQHIVGIGVDSTGSTPAPIDEQGQVLALRPDFADNPNAMFVLWKDHTAIEEAEEINRLCRSGEFADYSRYIGGVY
SSEWFWAKILHVTRADVAVREAAVSWIELCDWVPALLSGTTAPQDIQRGRCSAGHKSLWHPSWGGLPPRAFLAALDTSLV
NDLDYPMFTDTYTAERPVGQITAEWAERLGLPTTVILSGGAFDCHMGAVGAGAQPYTLVKVIGTSTCDILIADDQRVGDR
AIAGICGQVEGSVLPGWIGMEAGQSAFGDMYAWFSNLLSWPLHQAALTQPEWQPQLKQIESNLLASLTCAWAQNPSLDHL
PVVLDWFNGRRTPNANQRLKGVITDLNLGTDAPTLFGGFIAATAFGARAIMECFEQQDIPVENVLALGGIARKSPVIMQV
CADVMNRPLQIVASDQCCALGAAIFAAVAAGAHEDVPTAQRHMACNIERTLIPDPVQVVRYQQLYQRYQQWCHTAEPHYA
PVTKAIH
>Mature_566_residues
TGNVISADGAIALGLDFGSDSVRVLAVDCQHGTEIDTEVVYYPRWKKGLYCQAAQNQFRHHPLDYIEAMEQAIRQMVKRL
SEEQRQHIVGIGVDSTGSTPAPIDEQGQVLALRPDFADNPNAMFVLWKDHTAIEEAEEINRLCRSGEFADYSRYIGGVYS
SEWFWAKILHVTRADVAVREAAVSWIELCDWVPALLSGTTAPQDIQRGRCSAGHKSLWHPSWGGLPPRAFLAALDTSLVN
DLDYPMFTDTYTAERPVGQITAEWAERLGLPTTVILSGGAFDCHMGAVGAGAQPYTLVKVIGTSTCDILIADDQRVGDRA
IAGICGQVEGSVLPGWIGMEAGQSAFGDMYAWFSNLLSWPLHQAALTQPEWQPQLKQIESNLLASLTCAWAQNPSLDHLP
VVLDWFNGRRTPNANQRLKGVITDLNLGTDAPTLFGGFIAATAFGARAIMECFEQQDIPVENVLALGGIARKSPVIMQVC
ADVMNRPLQIVASDQCCALGAAIFAAVAAGAHEDVPTAQRHMACNIERTLIPDPVQVVRYQQLYQRYQQWCHTAEPHYAP
VTKAIH

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1786249, Length=553, Percent_Identity=72.3327305605787, Blast_Score=818, Evalue=0.0,
Organism=Drosophila melanogaster, GI24657106, Length=540, Percent_Identity=26.6666666666667, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24657102, Length=540, Percent_Identity=26.6666666666667, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21356323, Length=415, Percent_Identity=26.9879518072289, Blast_Score=79, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 62138; Mature: 62007

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGNVISADGAIALGLDFGSDSVRVLAVDCQHGTEIDTEVVYYPRWKKGLYCQAAQNQFR
CCCCEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEHHHHHHHC
HHPLDYIEAMEQAIRQMVKRLSEEQRQHIVGIGVDSTGSTPAPIDEQGQVLALRPDFADN
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC
PNAMFVLWKDHTAIEEAEEINRLCRSGEFADYSRYIGGVYSSEWFWAKILHVTRADVAVR
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EAAVSWIELCDWVPALLSGTTAPQDIQRGRCSAGHKSLWHPSWGGLPPRAFLAALDTSLV
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
NDLDYPMFTDTYTAERPVGQITAEWAERLGLPTTVILSGGAFDCHMGAVGAGAQPYTLVK
HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCCEEEEE
VIGTSTCDILIADDQRVGDRAIAGICGQVEGSVLPGWIGMEAGQSAFGDMYAWFSNLLSW
EECCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
PLHQAALTQPEWQPQLKQIESNLLASLTCAWAQNPSLDHLPVVLDWFNGRRTPNANQRLK
CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHH
GVITDLNLGTDAPTLFGGFIAATAFGARAIMECFEQQDIPVENVLALGGIARKSPVIMQV
HEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHH
CADVMNRPLQIVASDQCCALGAAIFAAVAAGAHEDVPTAQRHMACNIERTLIPDPVQVVR
HHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH
YQQLYQRYQQWCHTAEPHYAPVTKAIH
HHHHHHHHHHHHCCCCCCCCCHHHCCC
>Mature Secondary Structure 
TGNVISADGAIALGLDFGSDSVRVLAVDCQHGTEIDTEVVYYPRWKKGLYCQAAQNQFR
CCCEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEEHHHHHHHC
HHPLDYIEAMEQAIRQMVKRLSEEQRQHIVGIGVDSTGSTPAPIDEQGQVLALRPDFADN
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC
PNAMFVLWKDHTAIEEAEEINRLCRSGEFADYSRYIGGVYSSEWFWAKILHVTRADVAVR
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EAAVSWIELCDWVPALLSGTTAPQDIQRGRCSAGHKSLWHPSWGGLPPRAFLAALDTSLV
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
NDLDYPMFTDTYTAERPVGQITAEWAERLGLPTTVILSGGAFDCHMGAVGAGAQPYTLVK
HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCCEEEEE
VIGTSTCDILIADDQRVGDRAIAGICGQVEGSVLPGWIGMEAGQSAFGDMYAWFSNLLSW
EECCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
PLHQAALTQPEWQPQLKQIESNLLASLTCAWAQNPSLDHLPVVLDWFNGRRTPNANQRLK
CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHH
GVITDLNLGTDAPTLFGGFIAATAFGARAIMECFEQQDIPVENVLALGGIARKSPVIMQV
HEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHH
CADVMNRPLQIVASDQCCALGAAIFAAVAAGAHEDVPTAQRHMACNIERTLIPDPVQVVR
HHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH
YQQLYQRYQQWCHTAEPHYAPVTKAIH
HHHHHHHHHHHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA