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The map label for this gene is ybjS [H]

Identifier: 51596301

GI number: 51596301

Start: 2327715

End: 2328626

Strand: Direct

Name: ybjS [H]

Synonym: YPTB1975

Alternate gene names: 51596301

Gene position: 2327715-2328626 (Clockwise)

Preceding gene: 51596300

Following gene: 51596302

Centisome position: 49.06

GC content: 49.34

Gene sequence:

>912_bases
ATGCGCCGCTTTGCCTGTCATGACGGAATTAGACTCTGTGGTATTGGGCGGCGCTCGGTAGAGGGTTTTCCCACGTCAGT
GCGTTATCAGGCGCTGGATTTAGCCCGGCTTGCAACACTGGATTTTACGCCAGATGTGGTTATTCATGCTGCCGGACGAG
CCGGGCCATGGGGAACCCGCAGTGAGTACTACCGTGATAACGTGGTCACTACAGAGCAGGTGATTAAATTCTGTCAGTCC
AGAGGAAACCCACGGCTAATTTATCTTTCGACTGCCGCGGTCTATTACCGTTACTGCCATCAACTGGCACTCACTGAACA
GTCTGAAATCGGGCCTGAATTTGCCAATGATTATGCTCTCACGAAACATCAGGGTGAGGCGCTGATCGAGGCTTATCAGG
GAGAGAAAACCATTTTGCGTCCTTGTGCCGTATTTGGCCCTGGAGACCAACTGCTTTTCCCTCCCTTATTAGACGCGGCC
AGTCGTCACGGGCTTCCTCTTTTAATTTCTGAGGTGCCCGCACGTGGGGAATTAATGCATATCGATGTGCTGTGTGATTA
CCTGTTAAAAGCCGCCATTAAGCCGGAACTGCGCCCGTTCTATAATTTATCCAATGCAGAACCCATTGAAATTAATGAAT
TTCTTATTGATGTCTTGAGCAAGCTTGGCCTCCCAGCACCTAAAAGAGAGGTTCGCGTAGCCACTGCAATGCTAATCGCC
GGAATCATTGAAGGTACATATCGGTTATTGCGTATTAAAAGTGAACCGTCCATCACCCGGTTTGGCGTTGGGGTTTTGGG
CTATTCGAAAACATTGGATGTGAGTGCGGCTATACACGATTTTGGTTCGCCATCCCGTTCCCTTTCTCAAGGGCTAGATG
CCTTTATTCGCTGGTACAAGGAACAGAAATAA

Upstream 100 bases:

>100_bases
GTGGGTAAATGGGCACCAATCCACAGATGTCGTCAGATAAAGGTGAGCGATGACGAATATATTGATAACGGGCGCATCGG
GGTTTATTGGCGGGGCATTT

Downstream 100 bases:

>100_bases
TGATTTACCTCGCGGCCATCTGGCTGGGCATCTTGTTGTTTAAGCTGATTTTTACGCTACGAATGATGAAGAGAGGGACG
CAGGCAGGGTGTGGCGTACC

Product: dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFTPDVVIHAAGRAGPWGTRSEYYRDNVVTTEQVIKFCQS
RGNPRLIYLSTAAVYYRYCHQLALTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCAVFGPGDQLLFPPLLDAA
SRHGLPLLISEVPARGELMHIDVLCDYLLKAAIKPELRPFYNLSNAEPIEINEFLIDVLSKLGLPAPKREVRVATAMLIA
GIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGSPSRSLSQGLDAFIRWYKEQK

Sequences:

>Translated_303_residues
MRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFTPDVVIHAAGRAGPWGTRSEYYRDNVVTTEQVIKFCQS
RGNPRLIYLSTAAVYYRYCHQLALTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCAVFGPGDQLLFPPLLDAA
SRHGLPLLISEVPARGELMHIDVLCDYLLKAAIKPELRPFYNLSNAEPIEINEFLIDVLSKLGLPAPKREVRVATAMLIA
GIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGSPSRSLSQGLDAFIRWYKEQK
>Mature_303_residues
MRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFTPDVVIHAAGRAGPWGTRSEYYRDNVVTTEQVIKFCQS
RGNPRLIYLSTAAVYYRYCHQLALTEQSEIGPEFANDYALTKHQGEALIEAYQGEKTILRPCAVFGPGDQLLFPPLLDAA
SRHGLPLLISEVPARGELMHIDVLCDYLLKAAIKPELRPFYNLSNAEPIEINEFLIDVLSKLGLPAPKREVRVATAMLIA
GIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGSPSRSLSQGLDAFIRWYKEQK

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081792, Length=319, Percent_Identity=24.7648902821317, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33771; Mature: 33771

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFTPDVVIHAAGRAGPWGTR
CCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
SEYYRDNVVTTEQVIKFCQSRGNPRLIYLSTAAVYYRYCHQLALTEQSEIGPEFANDYAL
HHHHHCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCHHHCCCHHHCCCCE
TKHQGEALIEAYQGEKTILRPCAVFGPGDQLLFPPLLDAASRHGLPLLISEVPARGELMH
ECCCCHHHHHHHCCCHHHCCHHEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEE
IDVLCDYLLKAAIKPELRPFYNLSNAEPIEINEFLIDVLSKLGLPAPKREVRVATAMLIA
HHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGSPSRSLSQGLDAFIRWYK
HHHHHHEEEEEECCCCCEEHHCHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
EQK
CCC
>Mature Secondary Structure
MRRFACHDGIRLCGIGRRSVEGFPTSVRYQALDLARLATLDFTPDVVIHAAGRAGPWGTR
CCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
SEYYRDNVVTTEQVIKFCQSRGNPRLIYLSTAAVYYRYCHQLALTEQSEIGPEFANDYAL
HHHHHCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCHHHCCCHHHCCCCE
TKHQGEALIEAYQGEKTILRPCAVFGPGDQLLFPPLLDAASRHGLPLLISEVPARGELMH
ECCCCHHHHHHHCCCHHHCCHHEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEE
IDVLCDYLLKAAIKPELRPFYNLSNAEPIEINEFLIDVLSKLGLPAPKREVRVATAMLIA
HHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GIIEGTYRLLRIKSEPSITRFGVGVLGYSKTLDVSAAIHDFGSPSRSLSQGLDAFIRWYK
HHHHHHEEEEEECCCCCEEHHCHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
EQK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]