Definition Yersinia pseudotuberculosis IP 32953, complete genome.
Accession NC_006155
Length 4,744,671

Click here to switch to the map view.

The map label for this gene is 51596302

Identifier: 51596302

GI number: 51596302

Start: 2328626

End: 2329780

Strand: Direct

Name: 51596302

Synonym: YPTB1976

Alternate gene names: NA

Gene position: 2328626-2329780 (Clockwise)

Preceding gene: 51596301

Following gene: 51596303

Centisome position: 49.08

GC content: 47.97

Gene sequence:

>1155_bases
ATGATTTACCTCGCGGCCATCTGGCTGGGCATCTTGTTGTTTAAGCTGATTTTTACGCTACGAATGATGAAGAGAGGGAC
GCAGGCAGGGTGTGGCGTACCACAAGCCACCGCCACGATATTGCAACCTGTGTTGAGCGGTGATCCACAATTGGCAACCG
TGCTGGAGGCAAACGTCGTTGCACTAAAACAGGCACGTTTTTTTTGGCTTATTGACGATGATGATACGGTGGCAAGAGAG
ATAGCCATCAGTATTCAGTCGCGTTATCCCGACAGGGAAATTAAGGCAAGCTATTTCCCCTCAGCGCCTGAAGGGGTTAA
TCCTAAAGTTTTCAAGCTCGAACAGGCCTGGCGGGAGGTGGCGAGTGACATCTTATTGGTATTGGACGACGATGCGTTTT
TGTCAGCAGAGTCTTTCGGGACGCTATTGAACCAGATTGAAGAGGGCGCATTAGTGACCGCGCTTCCTTATTATTGTGCC
GATAGTAATGGGTACTCCCGGCTATTGGCGCAATTCGTTAATGATAATTCCGGTTTCACCTACCTGCCCTTGTTGCCGTT
TTCACCCCCCTTAACCATCAATGGGATGTGTTATGCGATATCCGTCAATACGTTGGCTCAAGTGGGGGGCTTTGCCGCTA
TTCTACACGACCTGGCCGATGATCTGGCGTTGGCAACCCTGCTCAGACAACATCATATTCGTCTAATACAATCCACCGCC
CCAGTAAGGGTTCAAACCAGTCTTTCTTCTGGCAAAAAGTATATACAACAAATGCATCGTTGGTTTTTGTTTGCCACGCT
ACTGTTGCGTGAAAAAACAGTGCTGATAAAACTGATTATATTTCTGCTACAGGGGCTGCATCCTTTACTCATGTGGGCGA
TGTTACTCACTGTTGGATGGGAGTGGGTGACGGCGGCCCACGGCATCACAGGGATTAACCTGGGCATTATTGCGGCTTGT
TTGCTGATACGCCATGCTGCCCTCCGTCACGTTCAGCAGGCCATTGCCCCTGATATCCGTTCAAATCCTATTTTTTCGCT
GTTATCTGAATTAATGCAACCGTTACATTTATTACATGCGTTGTGTAACCGAACGATTTACTGGCGAACGCGGCGCTATC
GTGTTTTGAGTAATAAAAAGTTTAATTCACTATGA

Upstream 100 bases:

>100_bases
CATTGGATGTGAGTGCGGCTATACACGATTTTGGTTCGCCATCCCGTTCCCTTTCTCAAGGGCTAGATGCCTTTATTCGC
TGGTACAAGGAACAGAAATA

Downstream 100 bases:

>100_bases
ATAAGATAACCTTACAGATAGCTTATATTACCGGCCGTAGCTCGCCAGAAAGCGGTAGTTTAAGCCCGGTTCAATTAGCC
TTTATCAAAAAATTAGCTCA

Product: glycosyl transferase

Products: UDP; D-glucosyl-N-acylsphingosine

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVVALKQARFFWLIDDDDTVARE
IAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREVASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA
DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA
PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC
LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL

Sequences:

>Translated_384_residues
MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVVALKQARFFWLIDDDDTVARE
IAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREVASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA
DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA
PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC
LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL
>Mature_384_residues
MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVVALKQARFFWLIDDDDTVARE
IAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREVASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA
DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA
PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC
LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4507811, Length=369, Percent_Identity=22.4932249322493, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25147526, Length=394, Percent_Identity=20.8121827411168, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.4.1.80

Molecular weight: Translated: 42978; Mature: 42978

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVV
CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
ALKQARFFWLIDDDDTVAREIAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREV
HEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCADSNGYSRLLAQFVNDNSGFT
HHCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCHHHHHHHHHCCCCCEE
YLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA
EEEECCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGW
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EWVTAAHGITGINLGIIAACLLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LCNRTIYWRTRRYRVLSNKKFNSL
HHCCEEEEEHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVV
CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
ALKQARFFWLIDDDDTVAREIAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREV
HEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCADSNGYSRLLAQFVNDNSGFT
HHCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCHHHHHHHHHCCCCCEE
YLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA
EEEECCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGW
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EWVTAAHGITGINLGIIAACLLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LCNRTIYWRTRRYRVLSNKKFNSL
HHCCEEEEEHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDP-glucose; N-acylsphingosine

Specific reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA