| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596302
Identifier: 51596302
GI number: 51596302
Start: 2328626
End: 2329780
Strand: Direct
Name: 51596302
Synonym: YPTB1976
Alternate gene names: NA
Gene position: 2328626-2329780 (Clockwise)
Preceding gene: 51596301
Following gene: 51596303
Centisome position: 49.08
GC content: 47.97
Gene sequence:
>1155_bases ATGATTTACCTCGCGGCCATCTGGCTGGGCATCTTGTTGTTTAAGCTGATTTTTACGCTACGAATGATGAAGAGAGGGAC GCAGGCAGGGTGTGGCGTACCACAAGCCACCGCCACGATATTGCAACCTGTGTTGAGCGGTGATCCACAATTGGCAACCG TGCTGGAGGCAAACGTCGTTGCACTAAAACAGGCACGTTTTTTTTGGCTTATTGACGATGATGATACGGTGGCAAGAGAG ATAGCCATCAGTATTCAGTCGCGTTATCCCGACAGGGAAATTAAGGCAAGCTATTTCCCCTCAGCGCCTGAAGGGGTTAA TCCTAAAGTTTTCAAGCTCGAACAGGCCTGGCGGGAGGTGGCGAGTGACATCTTATTGGTATTGGACGACGATGCGTTTT TGTCAGCAGAGTCTTTCGGGACGCTATTGAACCAGATTGAAGAGGGCGCATTAGTGACCGCGCTTCCTTATTATTGTGCC GATAGTAATGGGTACTCCCGGCTATTGGCGCAATTCGTTAATGATAATTCCGGTTTCACCTACCTGCCCTTGTTGCCGTT TTCACCCCCCTTAACCATCAATGGGATGTGTTATGCGATATCCGTCAATACGTTGGCTCAAGTGGGGGGCTTTGCCGCTA TTCTACACGACCTGGCCGATGATCTGGCGTTGGCAACCCTGCTCAGACAACATCATATTCGTCTAATACAATCCACCGCC CCAGTAAGGGTTCAAACCAGTCTTTCTTCTGGCAAAAAGTATATACAACAAATGCATCGTTGGTTTTTGTTTGCCACGCT ACTGTTGCGTGAAAAAACAGTGCTGATAAAACTGATTATATTTCTGCTACAGGGGCTGCATCCTTTACTCATGTGGGCGA TGTTACTCACTGTTGGATGGGAGTGGGTGACGGCGGCCCACGGCATCACAGGGATTAACCTGGGCATTATTGCGGCTTGT TTGCTGATACGCCATGCTGCCCTCCGTCACGTTCAGCAGGCCATTGCCCCTGATATCCGTTCAAATCCTATTTTTTCGCT GTTATCTGAATTAATGCAACCGTTACATTTATTACATGCGTTGTGTAACCGAACGATTTACTGGCGAACGCGGCGCTATC GTGTTTTGAGTAATAAAAAGTTTAATTCACTATGA
Upstream 100 bases:
>100_bases CATTGGATGTGAGTGCGGCTATACACGATTTTGGTTCGCCATCCCGTTCCCTTTCTCAAGGGCTAGATGCCTTTATTCGC TGGTACAAGGAACAGAAATA
Downstream 100 bases:
>100_bases ATAAGATAACCTTACAGATAGCTTATATTACCGGCCGTAGCTCGCCAGAAAGCGGTAGTTTAAGCCCGGTTCAATTAGCC TTTATCAAAAAATTAGCTCA
Product: glycosyl transferase
Products: UDP; D-glucosyl-N-acylsphingosine
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVVALKQARFFWLIDDDDTVARE IAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREVASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL
Sequences:
>Translated_384_residues MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVVALKQARFFWLIDDDDTVARE IAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREVASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL >Mature_384_residues MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVVALKQARFFWLIDDDDTVARE IAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREVASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=369, Percent_Identity=22.4932249322493, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25147526, Length=394, Percent_Identity=20.8121827411168, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.80
Molecular weight: Translated: 42978; Mature: 42978
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVV CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ALKQARFFWLIDDDDTVAREIAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREV HEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCADSNGYSRLLAQFVNDNSGFT HHCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCHHHHHHHHHCCCCCEE YLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA EEEECCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGW CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH EWVTAAHGITGINLGIIAACLLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LCNRTIYWRTRRYRVLSNKKFNSL HHCCEEEEEHHHHHHHCCCCCCCC >Mature Secondary Structure MIYLAAIWLGILLFKLIFTLRMMKRGTQAGCGVPQATATILQPVLSGDPQLATVLEANVV CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ALKQARFFWLIDDDDTVAREIAISIQSRYPDREIKASYFPSAPEGVNPKVFKLEQAWREV HEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ASDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCADSNGYSRLLAQFVNDNSGFT HHCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCHHHHHHHHHCCCCCEE YLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA EEEECCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGW CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH EWVTAAHGITGINLGIIAACLLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LCNRTIYWRTRRYRVLSNKKFNSL HHCCEEEEEHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-glucose; N-acylsphingosine
Specific reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA