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The map label for this gene is 51596207

Identifier: 51596207

GI number: 51596207

Start: 2217547

End: 2217966

Strand: Direct

Name: 51596207

Synonym: YPTB1872

Alternate gene names: NA

Gene position: 2217547-2217966 (Clockwise)

Preceding gene: 51596206

Following gene: 51596208

Centisome position: 46.74

GC content: 43.33

Gene sequence:

>420_bases
GTGGCTGTTCGTAAATTAACTACTGGCAAATGGATTTGTGAGTGTTATCCCAATGGACGGCGTGGTGAGCGGCTTCGTAA
GCAGTTTGCTACTAAAGGCGAGGCGCTCTCATTTGAGCGCCGTATGATGCAGAAAGATCAGGTTGTTGAGGTTTCTGTGA
GCAATACATTGAAACTCAGCAATTTAGTTAGTCGTTGGTATGAAATGCACGGGCAGACTTTAACATCAGGTAAAACCCGA
AAGGTAAAGTTAGAGGCTATCTGCGAACGGTTGGGTGATCCACTGGTCACTGATTTTGACAAGAATACTTTTGCTGTTTA
TCGGGAGCAGAAACCATTTCGCCACTACCCGATATTTTCAGGGGGCGTATTTGCTTCAGGTTTTTTAATTGCGCTTTTAA
TAGTCACATTTAGTAAGTAA

Upstream 100 bases:

>100_bases
ACGAATACAGGGAAAGCCTTGCTCTCGCTAGACAGGCTCAACTAGATGCCAATCCTGAACAGGAATTGGTTGTTGCCTGA
TGGCATAAGAGGAAAACTAC

Downstream 100 bases:

>100_bases
CTCACGCTCAAATTATTTACATTGTGATATTTAATTAATTATTTTCTTAACCTTATCGAGGGCTAGCGATGAAAAAGGTA
CTGTCACTGACGTTTCTTAT

Product: bacteriophage integrase

Products: NA

Alternate protein names: Integrase Family Protein; Bacteriophage Integrase; Phage Integrase; Phage Integrase Family Protein; Integrase Bacteriophage Origin; Phage Integrase Family Site-Specific Recombinase; Bacteriophage

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MAVRKLTTGKWICECYPNGRRGERLRKQFATKGEALSFERRMMQKDQVVEVSVSNTLKLSNLVSRWYEMHGQTLTSGKTR
KVKLEAICERLGDPLVTDFDKNTFAVYREQKPFRHYPIFSGGVFASGFLIALLIVTFSK

Sequences:

>Translated_139_residues
MAVRKLTTGKWICECYPNGRRGERLRKQFATKGEALSFERRMMQKDQVVEVSVSNTLKLSNLVSRWYEMHGQTLTSGKTR
KVKLEAICERLGDPLVTDFDKNTFAVYREQKPFRHYPIFSGGVFASGFLIALLIVTFSK
>Mature_138_residues
AVRKLTTGKWICECYPNGRRGERLRKQFATKGEALSFERRMMQKDQVVEVSVSNTLKLSNLVSRWYEMHGQTLTSGKTRK
VKLEAICERLGDPLVTDFDKNTFAVYREQKPFRHYPIFSGGVFASGFLIALLIVTFSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15987; Mature: 15856

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRKLTTGKWICECYPNGRRGERLRKQFATKGEALSFERRMMQKDQVVEVSVSNTLKLS
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHH
NLVSRWYEMHGQTLTSGKTRKVKLEAICERLGDPLVTDFDKNTFAVYREQKPFRHYPIFS
HHHHHHHHHCCCEECCCCCEEEEHHHHHHHHCCCCEECCCCCEEEEEECCCCCCCCCCCC
GGVFASGFLIALLIVTFSK
CCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVRKLTTGKWICECYPNGRRGERLRKQFATKGEALSFERRMMQKDQVVEVSVSNTLKLS
CCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHH
NLVSRWYEMHGQTLTSGKTRKVKLEAICERLGDPLVTDFDKNTFAVYREQKPFRHYPIFS
HHHHHHHHHCCCEECCCCCEEEEHHHHHHHHCCCCEECCCCCEEEEEECCCCCCCCCCCC
GGVFASGFLIALLIVTFSK
CCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA