| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is USO1
Identifier: 51596206
GI number: 51596206
Start: 2215829
End: 2217526
Strand: Direct
Name: USO1
Synonym: YPTB1871
Alternate gene names: NA
Gene position: 2215829-2217526 (Clockwise)
Preceding gene: 51596205
Following gene: 51596207
Centisome position: 46.7
GC content: 36.75
Gene sequence:
>1698_bases ATGGAAATCGTACTTATTGTTCTTATTGTTTTAGGGGTGGTTAGTCCATATCTGTTTTATTTGATAATAAAAAAACAGAA ATTACTCAAGCAACTGAGAATTGATGAAGAAAAGATAAAGTTAGAGATCGAAAATCTTAAAAGTGAACTGACATCCTCAC ATAACAAGTATATAGAGTTAGAGGAAAATACAGCTCCTTTATGGAAGTATACCGAGATTTACAATGCGGAATTATTTGCA GATAAAATAATTTCAGATGCGAATGAAACAGTTAAAAAACTACTTCATGATGCTCATAACAAGTCTTCAAAAATAATTAA TGAAGCAAACAGGCATTCAGAGATAACGATAATAAATGCTGATAAACAAGCTCAAATGACTCTGGGCAATGCGCGTGAAG AGGCTATAGCAATTACTCGCGAAGTTCGCGAAACTCGCCTTAAAGCAAAAGAGAAGTTAGATGAGGCCCATACAAAAGCT GAGGAAATTATCCGTAATGCAAATGATAATGCAGTTAGCTTAATGAATAATGCGGAAGAAAGGGCTAAAGAAATAGCAGG TTCGGCGTATGAGGCTAAAGAGTTTGCTGAAAAGTATGAGTCAGTAGCAAATGCAATGAAAAATAAAATAAAAGGCTATG GAGATGAGTGGATTATTCCTAATAGAAGTATATTAGATGAATTAGCAGAAGAATATTCATTTAAAGATGCTGGCAATGAG TTGAAAAAGGCGAGAGAACTAACCAGAACGCTGATGCGCGCTGATAAAGCGGCAAGCTGCCAGTATGTTGAGCCAAACAG ACGTAATACGGCAATCAATTTTATACTAGATGCCTTTAATGGCAAGGTTGATACTGTTATGGCAAAAGTCCGCTATAACA ATTATGGCAAATTATCACAAGAAATAAGAGATGCATTTTCGCTTGTTAATTTTAACGGTGGTGCATTCAGAGATGCAAAA ATAACAGATACTTTTTTGCAGGCAAGATTAAATGAGCTTCGATGGGCAGTCGCTGTAAATGAAATTCTCATAGAAGAAAA AGAAGAACAAAGAAGAATTAAAGAACAGTTAAGGGAAGAAGAAAAAGCCCGTAAGGAATATGAAAAAGCTATTAAAGATG CTGAAAAAGAAGAAAAAATGATAGTGCAGGCTATCGAAAAAGCAACTAAGGATCTACAAGCTGCAAATGATGAACAGCGG GCTGTGTTACAACAGCAGTTAGATGAGCTACAGAAGAAATATGAAGAGGCAGAAGCAAAAAATCAACGTGCAATATCTAT GGCTCAACAAACACGAGCTGGCCATGTCTATGTAATTAGTAATATTGGTTCCTTTGGTGAAGATGTATTTAAAATCGGTA TGACCAGACGTTTAGAACCGATGGATCGTGTAAAAGAACTCGGTGATGCAAGCGTACCATTCTCGTTTGATGTTCACGCC ATGATTTATAGTGAAGATGCACCTACCCTCGAAAATGCGCTTCATAGAAAATTCAAACAGGCTCAGCTTAATAAAATTAA TCAGCGCAAAGAGTTCTTTAGTGTGTCGTTGTCAGATATTAAATCGCTACTTGATGATATGCATATTGAAACCCATTGGA CATTAAAAGCTGATGCGTACGAATACAGGGAAAGCCTTGCTCTCGCTAGACAGGCTCAACTAGATGCCAATCCTGAACAG GAATTGGTTGTTGCCTGA
Upstream 100 bases:
>100_bases ACTCGGCAAGGCTAAATATACAGGCGGTTGGCGATGCGTTCGCGCAATCGAAGCCTCAATTGAAGTCGAACAATAACTAG TAATATGGGAGGTTGAGTTA
Downstream 100 bases:
>100_bases TGGCATAAGAGGAAAACTACGTGGCTGTTCGTAAATTAACTACTGGCAAATGGATTTGTGAGTGTTATCCCAATGGACGG CGTGGTGAGCGGCTTCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Protein; Phage Membrane Protein; ATPase; Chromosome Segregation ATPase Phage Origin Coiled-Coil; Helicase
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MEIVLIVLIVLGVVSPYLFYLIIKKQKLLKQLRIDEEKIKLEIENLKSELTSSHNKYIELEENTAPLWKYTEIYNAELFA DKIISDANETVKKLLHDAHNKSSKIINEANRHSEITIINADKQAQMTLGNAREEAIAITREVRETRLKAKEKLDEAHTKA EEIIRNANDNAVSLMNNAEERAKEIAGSAYEAKEFAEKYESVANAMKNKIKGYGDEWIIPNRSILDELAEEYSFKDAGNE LKKARELTRTLMRADKAASCQYVEPNRRNTAINFILDAFNGKVDTVMAKVRYNNYGKLSQEIRDAFSLVNFNGGAFRDAK ITDTFLQARLNELRWAVAVNEILIEEKEEQRRIKEQLREEEKARKEYEKAIKDAEKEEKMIVQAIEKATKDLQAANDEQR AVLQQQLDELQKKYEEAEAKNQRAISMAQQTRAGHVYVISNIGSFGEDVFKIGMTRRLEPMDRVKELGDASVPFSFDVHA MIYSEDAPTLENALHRKFKQAQLNKINQRKEFFSVSLSDIKSLLDDMHIETHWTLKADAYEYRESLALARQAQLDANPEQ ELVVA
Sequences:
>Translated_565_residues MEIVLIVLIVLGVVSPYLFYLIIKKQKLLKQLRIDEEKIKLEIENLKSELTSSHNKYIELEENTAPLWKYTEIYNAELFA DKIISDANETVKKLLHDAHNKSSKIINEANRHSEITIINADKQAQMTLGNAREEAIAITREVRETRLKAKEKLDEAHTKA EEIIRNANDNAVSLMNNAEERAKEIAGSAYEAKEFAEKYESVANAMKNKIKGYGDEWIIPNRSILDELAEEYSFKDAGNE LKKARELTRTLMRADKAASCQYVEPNRRNTAINFILDAFNGKVDTVMAKVRYNNYGKLSQEIRDAFSLVNFNGGAFRDAK ITDTFLQARLNELRWAVAVNEILIEEKEEQRRIKEQLREEEKARKEYEKAIKDAEKEEKMIVQAIEKATKDLQAANDEQR AVLQQQLDELQKKYEEAEAKNQRAISMAQQTRAGHVYVISNIGSFGEDVFKIGMTRRLEPMDRVKELGDASVPFSFDVHA MIYSEDAPTLENALHRKFKQAQLNKINQRKEFFSVSLSDIKSLLDDMHIETHWTLKADAYEYRESLALARQAQLDANPEQ ELVVA >Mature_565_residues MEIVLIVLIVLGVVSPYLFYLIIKKQKLLKQLRIDEEKIKLEIENLKSELTSSHNKYIELEENTAPLWKYTEIYNAELFA DKIISDANETVKKLLHDAHNKSSKIINEANRHSEITIINADKQAQMTLGNAREEAIAITREVRETRLKAKEKLDEAHTKA EEIIRNANDNAVSLMNNAEERAKEIAGSAYEAKEFAEKYESVANAMKNKIKGYGDEWIIPNRSILDELAEEYSFKDAGNE LKKARELTRTLMRADKAASCQYVEPNRRNTAINFILDAFNGKVDTVMAKVRYNNYGKLSQEIRDAFSLVNFNGGAFRDAK ITDTFLQARLNELRWAVAVNEILIEEKEEQRRIKEQLREEEKARKEYEKAIKDAEKEEKMIVQAIEKATKDLQAANDEQR AVLQQQLDELQKKYEEAEAKNQRAISMAQQTRAGHVYVISNIGSFGEDVFKIGMTRRLEPMDRVKELGDASVPFSFDVHA MIYSEDAPTLENALHRKFKQAQLNKINQRKEFFSVSLSDIKSLLDDMHIETHWTLKADAYEYRESLALARQAQLDANPEQ ELVVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64969; Mature: 64969
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIVLIVLIVLGVVSPYLFYLIIKKQKLLKQLRIDEEKIKLEIENLKSELTSSHNKYIEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEE EENTAPLWKYTEIYNAELFADKIISDANETVKKLLHDAHNKSSKIINEANRHSEITIINA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEC DKQAQMTLGNAREEAIAITREVRETRLKAKEKLDEAHTKAEEIIRNANDNAVSLMNNAEE CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RAKEIAGSAYEAKEFAEKYESVANAMKNKIKGYGDEWIIPNRSILDELAEEYSFKDAGNE HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHCHHH LKKARELTRTLMRADKAASCQYVEPNRRNTAINFILDAFNGKVDTVMAKVRYNNYGKLSQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH EIRDAFSLVNFNGGAFRDAKITDTFLQARLNELRWAVAVNEILIEEKEEQRRIKEQLREE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH EKARKEYEKAIKDAEKEEKMIVQAIEKATKDLQAANDEQRAVLQQQLDELQKKYEEAEAK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH NQRAISMAQQTRAGHVYVISNIGSFGEDVFKIGMTRRLEPMDRVKELGDASVPFSFDVHA HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCHHCCCHHHHHHHCCCCCCCCCCCEEE MIYSEDAPTLENALHRKFKQAQLNKINQRKEFFSVSLSDIKSLLDDMHIETHWTLKADAY EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH EYRESLALARQAQLDANPEQELVVA HHHHHHHHHHHHHCCCCCCCCEECC >Mature Secondary Structure MEIVLIVLIVLGVVSPYLFYLIIKKQKLLKQLRIDEEKIKLEIENLKSELTSSHNKYIEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEE EENTAPLWKYTEIYNAELFADKIISDANETVKKLLHDAHNKSSKIINEANRHSEITIINA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEC DKQAQMTLGNAREEAIAITREVRETRLKAKEKLDEAHTKAEEIIRNANDNAVSLMNNAEE CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RAKEIAGSAYEAKEFAEKYESVANAMKNKIKGYGDEWIIPNRSILDELAEEYSFKDAGNE HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHCHHH LKKARELTRTLMRADKAASCQYVEPNRRNTAINFILDAFNGKVDTVMAKVRYNNYGKLSQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH EIRDAFSLVNFNGGAFRDAKITDTFLQARLNELRWAVAVNEILIEEKEEQRRIKEQLREE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH EKARKEYEKAIKDAEKEEKMIVQAIEKATKDLQAANDEQRAVLQQQLDELQKKYEEAEAK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH NQRAISMAQQTRAGHVYVISNIGSFGEDVFKIGMTRRLEPMDRVKELGDASVPFSFDVHA HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCHHCCCHHHHHHHCCCCCCCCCCCEEE MIYSEDAPTLENALHRKFKQAQLNKINQRKEFFSVSLSDIKSLLDDMHIETHWTLKADAY EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH EYRESLALARQAQLDANPEQELVVA HHHHHHHHHHHHHCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA