| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596158
Identifier: 51596158
GI number: 51596158
Start: 2169143
End: 2170771
Strand: Direct
Name: 51596158
Synonym: YPTB1823
Alternate gene names: NA
Gene position: 2169143-2170771 (Clockwise)
Preceding gene: 51596155
Following gene: 51596159
Centisome position: 45.72
GC content: 50.21
Gene sequence:
>1629_bases ATGTCTGCTATCGATATCACAACAATGCGCGGCGAAATGCCACGGGCGGTTGCACATCTATTGCCTGAGCAAGCGGCGAC CATTGCTAAAAACTGCCATTTTCGCCATGGCGTTATTACACCGCTAATGGCTGATGAAGACGGCGGGAAAACTTTCACTA TGCCGCCAACCACAATTTTCCGTTACCGCGATGATTATTGGTTTGCCTGGACTGACATTGTCGATGCGATACGCAGCCCA ATAGCACAGGATAAATATGAGCGGGTTTATTTCACTGATGGAAAATATCCCAAGGTCACCAGCAATGAAATCGCTACACA AGGGAACGGTAATTTCCCTGCGGTCAGTTTTCGCCTTGGGATCCCCGCACCCAGTAATCCTATTGAGGTTACTGCGATTA CACCGCCGGCTGATCATGGTGAAGATGATCCAACCGATGATGATACCCGTTTTTATGTTGAAACTTATGTCACTGGCTAT GGGGAGGAAGGGCCACCGGGGCCAGTATCGCAGGAAGTCACAATCGTTTATCCCGGCAGTACCGTTGATCTTGCTCTACA GCCACCGGGCAGTCAGAACTCAAATATCACCCGCCGCCGTATTTATCGCTCTGCCTCTGGCGGTGGGGTTGCTGATTATC TGCTGTTGGTGGAGCTGGATATTGGCGTGCTTGTGTATCAGGACACTTCGCTTGATAAAGAACTTGGCCCGGTATTGGAA ACTGAAAACTTCCTGATGCCGCCAGATGAAATGATTGGTCTGTGTCTGATGGCAAATGGCATTGCCGCAGGTTTTGCCGG TAATGAGGTGATGTTTTCTGAGGCGTTCCTGCCCTATGCATGGCCCGATAGCTACAAACAAAGTACCGAACACGATATTG TCGCTATTGCGCCTATTGGTGCCGGGCTGGTGGTTGGTACTAAAGGGCGTCCCTATCTCTTCAGTGGCATCACCCCGTCG AATATTACCAACGCTAAGTTACCGGTGATGCAAGCCTGTGTCAGCCGCCGCAGCATGGTGAGCTTGGACAGTTTCGCACT CTACGCGTCACCCAATGGATTGGTCTCGGTCGATGGTGCTGGCAATGCATTAGTTGCAACTGAGCAGATTATCGAGCCGC GTCAGTGGCGTAAAAACTTCAATCCAGAAAGCATCAAAGCGTGGCAGGTCGAAGGTGAATATCTGGCGATTTACCAGACG GCAAAAGGAACTAATGCCGGATTTATTTTCGATCCGCAAGCGATGGATATTCGCCATCTAACCACTGTTTTTGATACTGC ATTTAATGATCTGGAGTCGGATACGCTCTACACCATTAAAGGCGATAAATTAACCATCTCCCAAGCCAGTGCAACACCTT TGCCGATAACGTGGCGCAGCAAACCATTTCTTGCGCCACCTGGTACATCATTTTCTTGCCTGCGGATCATGAGTGAGAGC GTGAGCCGTGTAGGCGTCAATTTTATTGTGGATGGTTCTCCGGTGCTGTCGTTGCCGCCGGGGTCATTAATTGATGGCCT TCTGAAGTTGCCGCCAATCACTGGCCGCCGGTGGATTATTGAAGTATGGGGTTACGCACAAGTTGATCGCATCACCCTGA GTACCTCAATGACGGAGATGCCAGCATGA
Upstream 100 bases:
>100_bases ATTACGTTGATATCAGAGAATTAACGCGCTAAATTACCCAAAGATGCCAAGCCTCACTTTTTAGTGGGGCTTTTTTTATG CCCGCCGGAAATCACTCACT
Downstream 100 bases:
>100_bases CAAACGGCTTTCGTGCTGGCCGTGATTCAGCCGCACTCTCTGAAAATATTGAGGTATTGACTGGCCAACGCGGTGACGGT CGCAATCGTGCTGTGACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MSAIDITTMRGEMPRAVAHLLPEQAATIAKNCHFRHGVITPLMADEDGGKTFTMPPTTIFRYRDDYWFAWTDIVDAIRSP IAQDKYERVYFTDGKYPKVTSNEIATQGNGNFPAVSFRLGIPAPSNPIEVTAITPPADHGEDDPTDDDTRFYVETYVTGY GEEGPPGPVSQEVTIVYPGSTVDLALQPPGSQNSNITRRRIYRSASGGGVADYLLLVELDIGVLVYQDTSLDKELGPVLE TENFLMPPDEMIGLCLMANGIAAGFAGNEVMFSEAFLPYAWPDSYKQSTEHDIVAIAPIGAGLVVGTKGRPYLFSGITPS NITNAKLPVMQACVSRRSMVSLDSFALYASPNGLVSVDGAGNALVATEQIIEPRQWRKNFNPESIKAWQVEGEYLAIYQT AKGTNAGFIFDPQAMDIRHLTTVFDTAFNDLESDTLYTIKGDKLTISQASATPLPITWRSKPFLAPPGTSFSCLRIMSES VSRVGVNFIVDGSPVLSLPPGSLIDGLLKLPPITGRRWIIEVWGYAQVDRITLSTSMTEMPA
Sequences:
>Translated_542_residues MSAIDITTMRGEMPRAVAHLLPEQAATIAKNCHFRHGVITPLMADEDGGKTFTMPPTTIFRYRDDYWFAWTDIVDAIRSP IAQDKYERVYFTDGKYPKVTSNEIATQGNGNFPAVSFRLGIPAPSNPIEVTAITPPADHGEDDPTDDDTRFYVETYVTGY GEEGPPGPVSQEVTIVYPGSTVDLALQPPGSQNSNITRRRIYRSASGGGVADYLLLVELDIGVLVYQDTSLDKELGPVLE TENFLMPPDEMIGLCLMANGIAAGFAGNEVMFSEAFLPYAWPDSYKQSTEHDIVAIAPIGAGLVVGTKGRPYLFSGITPS NITNAKLPVMQACVSRRSMVSLDSFALYASPNGLVSVDGAGNALVATEQIIEPRQWRKNFNPESIKAWQVEGEYLAIYQT AKGTNAGFIFDPQAMDIRHLTTVFDTAFNDLESDTLYTIKGDKLTISQASATPLPITWRSKPFLAPPGTSFSCLRIMSES VSRVGVNFIVDGSPVLSLPPGSLIDGLLKLPPITGRRWIIEVWGYAQVDRITLSTSMTEMPA >Mature_541_residues SAIDITTMRGEMPRAVAHLLPEQAATIAKNCHFRHGVITPLMADEDGGKTFTMPPTTIFRYRDDYWFAWTDIVDAIRSPI AQDKYERVYFTDGKYPKVTSNEIATQGNGNFPAVSFRLGIPAPSNPIEVTAITPPADHGEDDPTDDDTRFYVETYVTGYG EEGPPGPVSQEVTIVYPGSTVDLALQPPGSQNSNITRRRIYRSASGGGVADYLLLVELDIGVLVYQDTSLDKELGPVLET ENFLMPPDEMIGLCLMANGIAAGFAGNEVMFSEAFLPYAWPDSYKQSTEHDIVAIAPIGAGLVVGTKGRPYLFSGITPSN ITNAKLPVMQACVSRRSMVSLDSFALYASPNGLVSVDGAGNALVATEQIIEPRQWRKNFNPESIKAWQVEGEYLAIYQTA KGTNAGFIFDPQAMDIRHLTTVFDTAFNDLESDTLYTIKGDKLTISQASATPLPITWRSKPFLAPPGTSFSCLRIMSESV SRVGVNFIVDGSPVLSLPPGSLIDGLLKLPPITGRRWIIEVWGYAQVDRITLSTSMTEMPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59104; Mature: 58972
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIDITTMRGEMPRAVAHLLPEQAATIAKNCHFRHGVITPLMADEDGGKTFTMPPTTIF CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEECCCCEEE RYRDDYWFAWTDIVDAIRSPIAQDKYERVYFTDGKYPKVTSNEIATQGNGNFPAVSFRLG EECCCEEEEHHHHHHHHHCCHHCCCCCEEEEECCCCCCCCCCCEEECCCCCCCEEEEEEC IPAPSNPIEVTAITPPADHGEDDPTDDDTRFYVETYVTGYGEEGPPGPVSQEVTIVYPGS CCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCC TVDLALQPPGSQNSNITRRRIYRSASGGGVADYLLLVELDIGVLVYQDTSLDKELGPVLE EEEEEECCCCCCCCCCHHHHHEECCCCCCCEEEEEEEEECCCEEEEECCCCCHHHCCCCC TENFLMPPDEMIGLCLMANGIAAGFAGNEVMFSEAFLPYAWPDSYKQSTEHDIVAIAPIG CCCCCCCHHHHHHHHHEECCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC AGLVVGTKGRPYLFSGITPSNITNAKLPVMQACVSRRSMVSLDSFALYASPNGLVSVDGA CCEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHEEEECCEEEEECCCCEEEECCC GNALVATEQIIEPRQWRKNFNPESIKAWQVEGEYLAIYQTAKGTNAGFIFDPQAMDIRHL CCEEEEHHHHCCCHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCCEEECCCCCCHHHH TTVFDTAFNDLESDTLYTIKGDKLTISQASATPLPITWRSKPFLAPPGTSFSCLRIMSES HHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH VSRVGVNFIVDGSPVLSLPPGSLIDGLLKLPPITGRRWIIEVWGYAQVDRITLSTSMTEM HHHCCCEEEECCCCEEECCCCHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEECCHHCC PA CC >Mature Secondary Structure SAIDITTMRGEMPRAVAHLLPEQAATIAKNCHFRHGVITPLMADEDGGKTFTMPPTTIF CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEECCCCEEE RYRDDYWFAWTDIVDAIRSPIAQDKYERVYFTDGKYPKVTSNEIATQGNGNFPAVSFRLG EECCCEEEEHHHHHHHHHCCHHCCCCCEEEEECCCCCCCCCCCEEECCCCCCCEEEEEEC IPAPSNPIEVTAITPPADHGEDDPTDDDTRFYVETYVTGYGEEGPPGPVSQEVTIVYPGS CCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCC TVDLALQPPGSQNSNITRRRIYRSASGGGVADYLLLVELDIGVLVYQDTSLDKELGPVLE EEEEEECCCCCCCCCCHHHHHEECCCCCCCEEEEEEEEECCCEEEEECCCCCHHHCCCCC TENFLMPPDEMIGLCLMANGIAAGFAGNEVMFSEAFLPYAWPDSYKQSTEHDIVAIAPIG CCCCCCCHHHHHHHHHEECCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC AGLVVGTKGRPYLFSGITPSNITNAKLPVMQACVSRRSMVSLDSFALYASPNGLVSVDGA CCEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHEEEECCEEEEECCCCEEEECCC GNALVATEQIIEPRQWRKNFNPESIKAWQVEGEYLAIYQTAKGTNAGFIFDPQAMDIRHL CCEEEEHHHHCCCHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCCEEECCCCCCHHHH TTVFDTAFNDLESDTLYTIKGDKLTISQASATPLPITWRSKPFLAPPGTSFSCLRIMSES HHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH VSRVGVNFIVDGSPVLSLPPGSLIDGLLKLPPITGRRWIIEVWGYAQVDRITLSTSMTEM HHHCCCEEEECCCCEEECCCCHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEECCHHCC PA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA