| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596159
Identifier: 51596159
GI number: 51596159
Start: 2170768
End: 2171874
Strand: Direct
Name: 51596159
Synonym: YPTB1824
Alternate gene names: NA
Gene position: 2170768-2171874 (Clockwise)
Preceding gene: 51596158
Following gene: 51596160
Centisome position: 45.75
GC content: 49.41
Gene sequence:
>1107_bases ATGACAAACGGCTTTCGTGCTGGCCGTGATTCAGCCGCACTCTCTGAAAATATTGAGGTATTGACTGGCCAACGCGGTGA CGGTCGCAATCGTGCTGTGACTTATGCTGATTTGGCTGATCTGGATTTAGCCAAATTGCGCACCGGCGCTGGCGGTAAAT TACAGCTCAAACCCAGCTCCAATGATAATACGGGGCCAGCCCCATCTTTTCCCACTCAACCACAAAACTTCAAAGCCAAC GGCGGTTTTGGTGCGGTACTGCTTGAGTGGGCTATGCCGAACTATCGCGGGCATTCACTGACCGAAATCTACCGCAGCAC CGAAGATAATTTGGCGAATGCGGTGATGGTGGCCAGCTCGGCTGCGGCGGTCTATGGCGACCCGGTTGATCCGGGCTGGC AGGGTTATTACTGGATTCGTTTTATCAACTCCGCAGGTGTGGCTGGGCCATTTAATGCCAGTGAAGGCACTCCGGCAAAA ACGGCTGCAGATATTGATGAAATCATTGACCTGATTAATAAGGAGATAAATAACTCGCCGTTAATTGGTGAACTGGCGAG CGGTATTGAGGATCTTGACCAACACGGTGGGCAAGCATTTCAAAAAATGTGGAGCACCAAAGTTGATGCCAGCGGGATCA CTGCAGGTATCGGGATTGTCGCAGGCATCGATGCTAACGGAAAACCCATTGCTCAGGTCGCCATATCGGCCAGCCAGCTT TTTGTCTTTGACCCGAACAATCCTACTGATACCGGTTCTTATGCTATTCCGTTTTCTATTTCCGACGGGCGAGTGGTCAT TGATGAGGCGGCTATCCGTGAAGCCACAATCAAAATTCTGAATGCTCAAACCATTATCGCTGATGAAGTTAAAGCAGGGA TTAGTATTTCAACGCCCACGCTCAATAGCGCCACGATCAATAACGGTAAATTCACCGTGGATGCCGCCGGTAATCTGAAG ATTGGCGAACTGTTCAGCGTTTCAAATACCGGACGAATTACAATCAAGCAAGGTACTGGCAGCATCGGCCTTGTTATCAC TAACGAGAGAATAGAGGTTTATGATGAGAAAGGTGCGCTTATGGTTCGTCTTGGTAAGCTTAATTAG
Upstream 100 bases:
>100_bases AGTTGCCGCCAATCACTGGCCGCCGGTGGATTATTGAAGTATGGGGTTACGCACAAGTTGATCGCATCACCCTGAGTACC TCAATGACGGAGATGCCAGC
Downstream 100 bases:
>100_bases TTTAACGGCATGTATATCGGTTGGTAAAAACCCGCCTCCTGATTTTAATTTCAACGGAGTTTGGCAGTGTCGAGCTACGG TCTAGAAGTATTTCGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MTNGFRAGRDSAALSENIEVLTGQRGDGRNRAVTYADLADLDLAKLRTGAGGKLQLKPSSNDNTGPAPSFPTQPQNFKAN GGFGAVLLEWAMPNYRGHSLTEIYRSTEDNLANAVMVASSAAAVYGDPVDPGWQGYYWIRFINSAGVAGPFNASEGTPAK TAADIDEIIDLINKEINNSPLIGELASGIEDLDQHGGQAFQKMWSTKVDASGITAGIGIVAGIDANGKPIAQVAISASQL FVFDPNNPTDTGSYAIPFSISDGRVVIDEAAIREATIKILNAQTIIADEVKAGISISTPTLNSATINNGKFTVDAAGNLK IGELFSVSNTGRITIKQGTGSIGLVITNERIEVYDEKGALMVRLGKLN
Sequences:
>Translated_368_residues MTNGFRAGRDSAALSENIEVLTGQRGDGRNRAVTYADLADLDLAKLRTGAGGKLQLKPSSNDNTGPAPSFPTQPQNFKAN GGFGAVLLEWAMPNYRGHSLTEIYRSTEDNLANAVMVASSAAAVYGDPVDPGWQGYYWIRFINSAGVAGPFNASEGTPAK TAADIDEIIDLINKEINNSPLIGELASGIEDLDQHGGQAFQKMWSTKVDASGITAGIGIVAGIDANGKPIAQVAISASQL FVFDPNNPTDTGSYAIPFSISDGRVVIDEAAIREATIKILNAQTIIADEVKAGISISTPTLNSATINNGKFTVDAAGNLK IGELFSVSNTGRITIKQGTGSIGLVITNERIEVYDEKGALMVRLGKLN >Mature_367_residues TNGFRAGRDSAALSENIEVLTGQRGDGRNRAVTYADLADLDLAKLRTGAGGKLQLKPSSNDNTGPAPSFPTQPQNFKANG GFGAVLLEWAMPNYRGHSLTEIYRSTEDNLANAVMVASSAAAVYGDPVDPGWQGYYWIRFINSAGVAGPFNASEGTPAKT AADIDEIIDLINKEINNSPLIGELASGIEDLDQHGGQAFQKMWSTKVDASGITAGIGIVAGIDANGKPIAQVAISASQLF VFDPNNPTDTGSYAIPFSISDGRVVIDEAAIREATIKILNAQTIIADEVKAGISISTPTLNSATINNGKFTVDAAGNLKI GELFSVSNTGRITIKQGTGSIGLVITNERIEVYDEKGALMVRLGKLN
Specific function: Unknown
COG id: COG4733
COG function: function code S; Phage-related protein, tail component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38662; Mature: 38530
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNGFRAGRDSAALSENIEVLTGQRGDGRNRAVTYADLADLDLAKLRTGAGGKLQLKPSS CCCCCCCCCCCHHHHCCCEEEECCCCCCCCCEEEEECCCCCCHHHHCCCCCCEEEECCCC NDNTGPAPSFPTQPQNFKANGGFGAVLLEWAMPNYRGHSLTEIYRSTEDNLANAVMVASS CCCCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCCCCHHHHHHHCCCCHHHHEEEEECC AAAVYGDPVDPGWQGYYWIRFINSAGVAGPFNASEGTPAKTAADIDEIIDLINKEINNSP CCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC LIGELASGIEDLDQHGGQAFQKMWSTKVDASGITAGIGIVAGIDANGKPIAQVAISASQL CHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEECEEEEEECCCCCCCCEEEEEEEEEE FVFDPNNPTDTGSYAIPFSISDGRVVIDEAAIREATIKILNAQTIIADEVKAGISISTPT EEECCCCCCCCCCEEEEEEECCCEEEEEHHHHHHEEEEEECCCEEEEHHHHCCEEEECCC LNSATINNGKFTVDAAGNLKIGELFSVSNTGRITIKQGTGSIGLVITNERIEVYDEKGAL CCCEEECCCCEEEEECCCEEEEEEEEECCCCEEEEEECCCEEEEEEECCEEEEEECCCEE MVRLGKLN EEEEECCC >Mature Secondary Structure TNGFRAGRDSAALSENIEVLTGQRGDGRNRAVTYADLADLDLAKLRTGAGGKLQLKPSS CCCCCCCCCCHHHHCCCEEEECCCCCCCCCEEEEECCCCCCHHHHCCCCCCEEEECCCC NDNTGPAPSFPTQPQNFKANGGFGAVLLEWAMPNYRGHSLTEIYRSTEDNLANAVMVASS CCCCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCCCCHHHHHHHCCCCHHHHEEEEECC AAAVYGDPVDPGWQGYYWIRFINSAGVAGPFNASEGTPAKTAADIDEIIDLINKEINNSP CCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC LIGELASGIEDLDQHGGQAFQKMWSTKVDASGITAGIGIVAGIDANGKPIAQVAISASQL CHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEECEEEEEECCCCCCCCEEEEEEEEEE FVFDPNNPTDTGSYAIPFSISDGRVVIDEAAIREATIKILNAQTIIADEVKAGISISTPT EEECCCCCCCCCCEEEEEEECCCEEEEEHHHHHHEEEEEECCCEEEEHHHHCCEEEECCC LNSATINNGKFTVDAAGNLKIGELFSVSNTGRITIKQGTGSIGLVITNERIEVYDEKGAL CCCEEECCCCEEEEECCCEEEEEEEEECCCCEEEEEECCCEEEEEEECCEEEEEECCCEE MVRLGKLN EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA