| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596108
Identifier: 51596108
GI number: 51596108
Start: 2124872
End: 2125750
Strand: Direct
Name: 51596108
Synonym: YPTB1773
Alternate gene names: NA
Gene position: 2124872-2125750 (Clockwise)
Preceding gene: 51596107
Following gene: 51596109
Centisome position: 44.78
GC content: 30.15
Gene sequence:
>879_bases ATGAACTCATTGCAAAATACTTTATCTACAGAGGATTGGATCGATACAACTATTTTGTTATTTCAGCATCCAAAGTATAA TAATAAAGCATTCTTTATAGTCGAAGGCGATAGTGATGTTGGTTTTTTCAAAGGTATATTCTCAGATAAGGAATTGCATT TTGATTCTCCGTGCTGTGGAAAGCCTGAAGTGATAAAGGCTGTATATAAGTTAAGGGGATATAATCATGAAAATGTATAT GGCATTTGTGATTCGGATTTTGACTTTATCAGTGGAAAAATAAAAGAATACGAAAATAAAGGTTTAATTTTCACTGATTA TCATGATGTTGAAATGATGTTGGTTAACTCAAATTCATTTGATAAATTCTATCATGAATTTACTAAACTTGAAGTTTGTA AGCACAATGAGATTAGTAGTGATGATGTGAAAAATAATATTTTTGATGCTGCTTATAAAATTGGACTATTAAAGTGGATC AACTATGATTTTGGGTTGTTACTTAATTTTAAAAGTATGAGATATGCGGATTTTATAGAGGTTGAGGATTTCAGTATTTC ATTCAACTTTAATAATCTACTTCACTCAGTTATAGGTAGAAGTAAAAGTTTCACAAGTGCATTAAGCATTGAGGAAATTA AAGTAAAATATCGTGAATACGAAGGAAGAAATGCTGAGAAACTCCATATTTGTAATGGGCATGATTTTTCTAACATCCTT GCTTTAGTATATAAACAAGAGTTGTCTAAAGACAGAAATATGAACCAAGACAGAGTTGAGTCTCATTTGAGAATGGGGTA TCCCAAAGAAATATTTTATAATACTGACCTATATAATAACATGAAAGAAATATTTACCTCATACGGAGTCGATGTGTAG
Upstream 100 bases:
>100_bases ATATAGATAAAGTAATAATCGCCACACATTCACCACAAGTCATTAATGGTAAATGGACTCTAACCATTGATTTATTTAAA GAAATCAACGGTGAACGATA
Downstream 100 bases:
>100_bases TCACTTGTAATTTAATTTACAAGTTACACGATTTTGTTTGATGAAAGTAAAATCAAACATTGACTACTGTTTTTATATAC AGTAAATAGGCCCAAGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MNSLQNTLSTEDWIDTTILLFQHPKYNNKAFFIVEGDSDVGFFKGIFSDKELHFDSPCCGKPEVIKAVYKLRGYNHENVY GICDSDFDFISGKIKEYENKGLIFTDYHDVEMMLVNSNSFDKFYHEFTKLEVCKHNEISSDDVKNNIFDAAYKIGLLKWI NYDFGLLLNFKSMRYADFIEVEDFSISFNFNNLLHSVIGRSKSFTSALSIEEIKVKYREYEGRNAEKLHICNGHDFSNIL ALVYKQELSKDRNMNQDRVESHLRMGYPKEIFYNTDLYNNMKEIFTSYGVDV
Sequences:
>Translated_292_residues MNSLQNTLSTEDWIDTTILLFQHPKYNNKAFFIVEGDSDVGFFKGIFSDKELHFDSPCCGKPEVIKAVYKLRGYNHENVY GICDSDFDFISGKIKEYENKGLIFTDYHDVEMMLVNSNSFDKFYHEFTKLEVCKHNEISSDDVKNNIFDAAYKIGLLKWI NYDFGLLLNFKSMRYADFIEVEDFSISFNFNNLLHSVIGRSKSFTSALSIEEIKVKYREYEGRNAEKLHICNGHDFSNIL ALVYKQELSKDRNMNQDRVESHLRMGYPKEIFYNTDLYNNMKEIFTSYGVDV >Mature_292_residues MNSLQNTLSTEDWIDTTILLFQHPKYNNKAFFIVEGDSDVGFFKGIFSDKELHFDSPCCGKPEVIKAVYKLRGYNHENVY GICDSDFDFISGKIKEYENKGLIFTDYHDVEMMLVNSNSFDKFYHEFTKLEVCKHNEISSDDVKNNIFDAAYKIGLLKWI NYDFGLLLNFKSMRYADFIEVEDFSISFNFNNLLHSVIGRSKSFTSALSIEEIKVKYREYEGRNAEKLHICNGHDFSNIL ALVYKQELSKDRNMNQDRVESHLRMGYPKEIFYNTDLYNNMKEIFTSYGVDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34213; Mature: 34213
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLQNTLSTEDWIDTTILLFQHPKYNNKAFFIVEGDSDVGFFKGIFSDKELHFDSPCCG CCCHHHHCCCCHHHCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCC KPEVIKAVYKLRGYNHENVYGICDSDFDFISGKIKEYENKGLIFTDYHDVEMMLVNSNSF CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCH DKFYHEFTKLEVCKHNEISSDDVKNNIFDAAYKIGLLKWINYDFGLLLNFKSMRYADFIE HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEE VEDFSISFNFNNLLHSVIGRSKSFTSALSIEEIKVKYREYEGRNAEKLHICNGHDFSNIL EEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHH ALVYKQELSKDRNMNQDRVESHLRMGYPKEIFYNTDLYNNMKEIFTSYGVDV HHHHHHHHHHCCCCCHHHHHHHHHCCCCHHEEECCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNSLQNTLSTEDWIDTTILLFQHPKYNNKAFFIVEGDSDVGFFKGIFSDKELHFDSPCCG CCCHHHHCCCCHHHCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCC KPEVIKAVYKLRGYNHENVYGICDSDFDFISGKIKEYENKGLIFTDYHDVEMMLVNSNSF CHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCH DKFYHEFTKLEVCKHNEISSDDVKNNIFDAAYKIGLLKWINYDFGLLLNFKSMRYADFIE HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEE VEDFSISFNFNNLLHSVIGRSKSFTSALSIEEIKVKYREYEGRNAEKLHICNGHDFSNIL EEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHH ALVYKQELSKDRNMNQDRVESHLRMGYPKEIFYNTDLYNNMKEIFTSYGVDV HHHHHHHHHHCCCCCHHHHHHHHHCCCCHHEEECCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA