| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596083
Identifier: 51596083
GI number: 51596083
Start: 2105854
End: 2106462
Strand: Reverse
Name: 51596083
Synonym: YPTB1748
Alternate gene names: NA
Gene position: 2106462-2105854 (Counterclockwise)
Preceding gene: 51596084
Following gene: 51596082
Centisome position: 44.4
GC content: 55.17
Gene sequence:
>609_bases ATGACTGACCGTTTATTGCCAGTCGGTTCCTCGGTACTGGAAGTGGCCGCCGCCCGCGCCTGTGCCGAACTGGAAAATAC CCCGGTTCCGATTCGCCAGCTCTGGAACGCCGACACCTGCCCGCTGGAATTATTGCCTTATTTGGCGTGGGCGTGGTCAG TGGATCGCTGGGATGAGAAGTGGCCGGAAGCCACCAAGCGTGCGGTGGTGAAGTCCTCGCAGTATGTCCATAAACACAAA GGCACCATTGGTGCTATTCGTCGGGTGGTTGAGCCGCTCGGCTATCTCATCAAGGTGATCGAGTGGTGGAAGACTAACGA AACGCCCGGCACTTTTCGCCTGGACGTTGGCGTATTGGAAACCGGCATTACCGAAGAAATGTATCAAGAGCTGGAACGGC TGATAGATGACGCCAAGCCATGCAGCCGTCACTTAGTTGGTCTGTCTATCAACCTCGACAGTAGCGGCCCGTTATATGTG GCCGCCGCCAGTTACAGCGGCGATGAACTGACCATCTACCCCTATTTGCCTGAAACCATAATCGTGACCGGCGAGGATTA CGCCAGTGCCGCAGTCCATATTATTGATGACATGAGAGTGAACCCATGA
Upstream 100 bases:
>100_bases GTCCAGCGGGCGGTGATTAATGCCCCGATAGCTGATGTGGTGCTGGATAAAACCCAAGCCGCATTCTGCACCGGCAGCGC CATCACGGTTGGGGGTACAG
Downstream 100 bases:
>100_bases CCGTGAAATTCTTTGCTTTACTGACCAACATCGGCGCGGCCAAGCTGGCGAACGCTACCGCGCTCGGCACCCGTTTAGAG ATCACCCAAATGGCGGTTGG
Product: bacteriophage protein
Products: NA
Alternate protein names: Tail Protein I; Phage Tail Protein; Phage-Related Tail Protein; Bacteriophage P2-Related Tail Formation Protein; Bacteriophage Protein; Pyocin R2_PP Tail Formation Protein GpI; Tail Protein I Prophage; Tail Formation-Like Protein; Phage P2 Baseplate Assembly GpI-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPI; Bacteriophage P2-Related Tail Formation Protein GpI; Prophage Tail Protein; Bacteriophage Tail Formation Protein I; Phage-Related Tail Protein I; Phage Tail-Like Protein; Pyocin R2_PP Tail Formation Protein; Bacteriophage Tail Protein I
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTDRLLPVGSSVLEVAAARACAELENTPVPIRQLWNADTCPLELLPYLAWAWSVDRWDEKWPEATKRAVVKSSQYVHKHK GTIGAIRRVVEPLGYLIKVIEWWKTNETPGTFRLDVGVLETGITEEMYQELERLIDDAKPCSRHLVGLSINLDSSGPLYV AAASYSGDELTIYPYLPETIIVTGEDYASAAVHIIDDMRVNP
Sequences:
>Translated_202_residues MTDRLLPVGSSVLEVAAARACAELENTPVPIRQLWNADTCPLELLPYLAWAWSVDRWDEKWPEATKRAVVKSSQYVHKHK GTIGAIRRVVEPLGYLIKVIEWWKTNETPGTFRLDVGVLETGITEEMYQELERLIDDAKPCSRHLVGLSINLDSSGPLYV AAASYSGDELTIYPYLPETIIVTGEDYASAAVHIIDDMRVNP >Mature_201_residues TDRLLPVGSSVLEVAAARACAELENTPVPIRQLWNADTCPLELLPYLAWAWSVDRWDEKWPEATKRAVVKSSQYVHKHKG TIGAIRRVVEPLGYLIKVIEWWKTNETPGTFRLDVGVLETGITEEMYQELERLIDDAKPCSRHLVGLSINLDSSGPLYVA AASYSGDELTIYPYLPETIIVTGEDYASAAVHIIDDMRVNP
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22624; Mature: 22493
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRLLPVGSSVLEVAAARACAELENTPVPIRQLWNADTCPLELLPYLAWAWSVDRWDEK CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHCHHHHHHH WPEATKRAVVKSSQYVHKHKGTIGAIRRVVEPLGYLIKVIEWWKTNETPGTFRLDVGVLE CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHH TGITEEMYQELERLIDDAKPCSRHLVGLSINLDSSGPLYVAAASYSGDELTIYPYLPETI CCCHHHHHHHHHHHHHCCCCHHHCEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEE IVTGEDYASAAVHIIDDMRVNP EEECCCHHHHHHHHHHCCCCCC >Mature Secondary Structure TDRLLPVGSSVLEVAAARACAELENTPVPIRQLWNADTCPLELLPYLAWAWSVDRWDEK CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHCHHHHHHH WPEATKRAVVKSSQYVHKHKGTIGAIRRVVEPLGYLIKVIEWWKTNETPGTFRLDVGVLE CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHH TGITEEMYQELERLIDDAKPCSRHLVGLSINLDSSGPLYVAAASYSGDELTIYPYLPETI CCCHHHHHHHHHHHHHCCCCHHHCEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEE IVTGEDYASAAVHIIDDMRVNP EEECCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA