Click here to switch to the map view.

The map label for this gene is 51596082

Identifier: 51596082

GI number: 51596082

Start: 2104418

End: 2105857

Strand: Reverse

Name: 51596082

Synonym: YPTB1747

Alternate gene names: NA

Gene position: 2105857-2104418 (Counterclockwise)

Preceding gene: 51596083

Following gene: 51596081

Centisome position: 44.38

GC content: 50.69

Gene sequence:

>1440_bases
ATGACCGTGAAATTCTTTGCTTTACTGACCAACATCGGCGCGGCCAAGCTGGCGAACGCTACCGCGCTCGGCACCCGTTT
AGAGATCACCCAAATGGCGGTTGGGGATGGCGGCGGAACTCTGCCAACCCCTAACCCGGCACAAACCCAGCTGGTGAATG
AACAGCGCCGCGCTGCCCTTAATATGCTGACCATTGACCCGGTTAATACCAGTCAGATTATTGCTGAACAGGTTATTCCT
GAGACTGAGGGCGGATGGTGGATCCGGGAAATTGGCTTGCTGGATAAAGACGGTGATTTGATTGCCATTGCCAACTGCGC
GGAAACCTATAAACCGCAACTGCAAGAGGGCAGCGGGCGCACCCAAACCATTCGGGTCATTTTGATTGTCAGCAGCACCG
CCGCTGTCACGCTAAAAATCGACCCATCCGTAGTATTGGCAACGCGGAAATATGCAGACGACAAAGCAATTGAGGTTAGG
CAGTATGCAGATAAGTTACTGTCTGAGCACGTCGCTGCGACAGATCCTCACGACCAATATTTACGTGCCGCCGACAATCT
TGCGGGCGTGAACGATAAGTCTCAAGGTCGAAAAAATATGGGGTTGGGCAAACTTGCACAACTGGACGAACTGGCATTCT
CTGATGTGGGTGCCGCGTCAGCCAATGATGTCGTATCACGTACACGGGGAGGCACATTTGATAAATCATTGCACGTTCGT
GACACATTGAGCGCAGGTAATATCAAATCAGAAACTAATATTGACGCGTCCGGGATTATTACTTCTCGTAATAAAATTGA
ATGTCGTTCGCCGGGTTCTGATGCCTATTCCGCCGGGTTCCGCTGTTATATTCGTGACTCGGTCACATCAATCACTACAG
ATTATGTCAATACGCATCCCGAAGGTGGGGAGCAGTGGGTGTTCGCGACAAATTACAACTTTGTTACTGGGGGTGTTGAT
TTCACTACCCGAGGTCATTTTATTTCTAATGGGATAGTGCGTGCGGGAGGGCTTGACGGTGGGTTTATGGATGGCAGTGG
AAATATCACCGGGGCGGTGTGGGGGGAAGGGGGTGGGGATCTTTGGGGATTTATTAACAATAAAATCGCGGGTGTGCTGG
CACAGTTTGGTAAACGTCACTTTGCTGGTTCGGATTATATCCGTATTCCAGACGTGCCGGGCGGGCTGATTGTGCAATGG
ATGACTGGCCCTGTTTCTGCCGGCGAAAATATCGCTTACCCTGAACTGGCTTTCCCCACCGCCTTTCCTGTTGCGTGTCT
AATGGCATTCACGGCCACTCAGGGGAATGACACAATACAAGCCGATGTGATGTTTCAAACATCGCGTTGGAATAACAGCA
CGGTAAAGGTGTTCCCGCAATGGTTTGGCACTGCACAGCAAAACCTGTGCTATCCACTTATTTTCGCCATTGGCTATTAA

Upstream 100 bases:

>100_bases
AACTGACCATCTACCCCTATTTGCCTGAAACCATAATCGTGACCGGCGAGGATTACGCCAGTGCCGCAGTCCATATTATT
GATGACATGAGAGTGAACCC

Downstream 100 bases:

>100_bases
GGATAAAAAACATGATCTATTTTTCTGCTACAACGGGCGGTTTTTATCCGCAGGAATGGAAAGAAGAATATCTGGCAACA
GGTAGCTGGCCTGATGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Tail Fiber Protein; Tail Collar Domain Protein; Phage-Related Tail Fibre Protein-Like Protein; Tail Fiber Protein H; Variable Tail Fibre Protein; Tail Fiber-Related Protein; Phage Tail Collar Domain Protein; Phage Tail Fiber Protein H; Phage Tail Collar Domain-Containing Protein; Tail Fiber Repeat 2-Containing Protein; Variable Tail Fiber Protein; Tail Fiber Domain Protein; Tail Fiber Domain-Containing Protein; Side Tail Phage Protein; Bacteriophage Tail Protein; Phage Tail Fibre Protein; Bacteriophage Variable Tail Fiber Protein H; Phage Tail Fiber Domain Protein; Phage Variable Tail Fiber Protein; Phage Tail Collar; Phage Protein Gph; Phage-Related Tail Fiber Protein-Like Protein; E14 Prophage; Bacteriophage Variable Tail Fibre Protein; Tail Fiber Repeat 2 Protein; Prophage Tail Fiber Protein; Phage Protein GpH; Phage Variable Tail Fibre Protein; Phage Tail Fiber-Like Protein; Phage P2 Tail Fiber GpH-Like Protein; Phage-Like Tail Fibre Protein; Phage-Like Tail Fiber-Like Protein; Phage Tail-Like Protein; Bacteriophage Protein; Tail Fiber Protein GpH

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MTVKFFALLTNIGAAKLANATALGTRLEITQMAVGDGGGTLPTPNPAQTQLVNEQRRAALNMLTIDPVNTSQIIAEQVIP
ETEGGWWIREIGLLDKDGDLIAIANCAETYKPQLQEGSGRTQTIRVILIVSSTAAVTLKIDPSVVLATRKYADDKAIEVR
QYADKLLSEHVAATDPHDQYLRAADNLAGVNDKSQGRKNMGLGKLAQLDELAFSDVGAASANDVVSRTRGGTFDKSLHVR
DTLSAGNIKSETNIDASGIITSRNKIECRSPGSDAYSAGFRCYIRDSVTSITTDYVNTHPEGGEQWVFATNYNFVTGGVD
FTTRGHFISNGIVRAGGLDGGFMDGSGNITGAVWGEGGGDLWGFINNKIAGVLAQFGKRHFAGSDYIRIPDVPGGLIVQW
MTGPVSAGENIAYPELAFPTAFPVACLMAFTATQGNDTIQADVMFQTSRWNNSTVKVFPQWFGTAQQNLCYPLIFAIGY

Sequences:

>Translated_479_residues
MTVKFFALLTNIGAAKLANATALGTRLEITQMAVGDGGGTLPTPNPAQTQLVNEQRRAALNMLTIDPVNTSQIIAEQVIP
ETEGGWWIREIGLLDKDGDLIAIANCAETYKPQLQEGSGRTQTIRVILIVSSTAAVTLKIDPSVVLATRKYADDKAIEVR
QYADKLLSEHVAATDPHDQYLRAADNLAGVNDKSQGRKNMGLGKLAQLDELAFSDVGAASANDVVSRTRGGTFDKSLHVR
DTLSAGNIKSETNIDASGIITSRNKIECRSPGSDAYSAGFRCYIRDSVTSITTDYVNTHPEGGEQWVFATNYNFVTGGVD
FTTRGHFISNGIVRAGGLDGGFMDGSGNITGAVWGEGGGDLWGFINNKIAGVLAQFGKRHFAGSDYIRIPDVPGGLIVQW
MTGPVSAGENIAYPELAFPTAFPVACLMAFTATQGNDTIQADVMFQTSRWNNSTVKVFPQWFGTAQQNLCYPLIFAIGY
>Mature_478_residues
TVKFFALLTNIGAAKLANATALGTRLEITQMAVGDGGGTLPTPNPAQTQLVNEQRRAALNMLTIDPVNTSQIIAEQVIPE
TEGGWWIREIGLLDKDGDLIAIANCAETYKPQLQEGSGRTQTIRVILIVSSTAAVTLKIDPSVVLATRKYADDKAIEVRQ
YADKLLSEHVAATDPHDQYLRAADNLAGVNDKSQGRKNMGLGKLAQLDELAFSDVGAASANDVVSRTRGGTFDKSLHVRD
TLSAGNIKSETNIDASGIITSRNKIECRSPGSDAYSAGFRCYIRDSVTSITTDYVNTHPEGGEQWVFATNYNFVTGGVDF
TTRGHFISNGIVRAGGLDGGFMDGSGNITGAVWGEGGGDLWGFINNKIAGVLAQFGKRHFAGSDYIRIPDVPGGLIVQWM
TGPVSAGENIAYPELAFPTAFPVACLMAFTATQGNDTIQADVMFQTSRWNNSTVKVFPQWFGTAQQNLCYPLIFAIGY

Specific function: Unknown

COG id: COG5301

COG function: function code R; Phage-related tail fibre protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51362; Mature: 51231

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKFFALLTNIGAAKLANATALGTRLEITQMAVGDGGGTLPTPNPAQTQLVNEQRRAAL
CEEEEEEHHHCCCHHHHCCCHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHE
NMLTIDPVNTSQIIAEQVIPETEGGWWIREIGLLDKDGDLIAIANCAETYKPQLQEGSGR
EEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCHHHCCCHHHCCCCC
TQTIRVILIVSSTAAVTLKIDPSVVLATRKYADDKAIEVRQYADKLLSEHVAATDPHDQY
EEEEEEEEEEECCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH
LRAADNLAGVNDKSQGRKNMGLGKLAQLDELAFSDVGAASANDVVSRTRGGTFDKSLHVR
HHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEE
DTLSAGNIKSETNIDASGIITSRNKIECRSPGSDAYSAGFRCYIRDSVTSITTDYVNTHP
ECCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCHHCCEEEEEECCCHHEEHHHHCCCC
EGGEQWVFATNYNFVTGGVDFTTRGHFISNGIVRAGGLDGGFMDGSGNITGAVWGEGGGD
CCCCEEEEEECCEEEECCEEEEECCCEECCCEEEECCCCCCEECCCCCEEEEEECCCCCC
LWGFINNKIAGVLAQFGKRHFAGSDYIRIPDVPGGLIVQWMTGPVSAGENIAYPELAFPT
CHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
AFPVACLMAFTATQGNDTIQADVMFQTSRWNNSTVKVFPQWFGTAQQNLCYPLIFAIGY
HHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEEEHHHHCCHHHCCCEEEEEEECC
>Mature Secondary Structure 
TVKFFALLTNIGAAKLANATALGTRLEITQMAVGDGGGTLPTPNPAQTQLVNEQRRAAL
EEEEEEHHHCCCHHHHCCCHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHE
NMLTIDPVNTSQIIAEQVIPETEGGWWIREIGLLDKDGDLIAIANCAETYKPQLQEGSGR
EEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCHHHCCCHHHCCCCC
TQTIRVILIVSSTAAVTLKIDPSVVLATRKYADDKAIEVRQYADKLLSEHVAATDPHDQY
EEEEEEEEEEECCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH
LRAADNLAGVNDKSQGRKNMGLGKLAQLDELAFSDVGAASANDVVSRTRGGTFDKSLHVR
HHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEE
DTLSAGNIKSETNIDASGIITSRNKIECRSPGSDAYSAGFRCYIRDSVTSITTDYVNTHP
ECCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCHHCCEEEEEECCCHHEEHHHHCCCC
EGGEQWVFATNYNFVTGGVDFTTRGHFISNGIVRAGGLDGGFMDGSGNITGAVWGEGGGD
CCCCEEEEEECCEEEECCEEEEECCCEECCCEEEECCCCCCEECCCCCEEEEEECCCCCC
LWGFINNKIAGVLAQFGKRHFAGSDYIRIPDVPGGLIVQWMTGPVSAGENIAYPELAFPT
CHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
AFPVACLMAFTATQGNDTIQADVMFQTSRWNNSTVKVFPQWFGTAQQNLCYPLIFAIGY
HHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEEEHHHHCCHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA