Definition Yersinia pseudotuberculosis IP 32953, complete genome.
Accession NC_006155
Length 4,744,671

Click here to switch to the map view.

The map label for this gene is 51595577

Identifier: 51595577

GI number: 51595577

Start: 1468379

End: 1469236

Strand: Direct

Name: 51595577

Synonym: YPTB1233

Alternate gene names: NA

Gene position: 1468379-1469236 (Clockwise)

Preceding gene: 51595576

Following gene: 51595578

Centisome position: 30.95

GC content: 46.74

Gene sequence:

>858_bases
GTGACTAGTTTGTCAATAACTGCTAAGCAATTCAAACCCTCCATTGCTGAGGAGCCTAAGATTGCCAGGCTAAAACAGCT
TGATCGGCATAGTTTGGAACAATTAATCCGTGGTGGCATCCTGGCAATTCGTATTCCCAATTACTGCCCTGAAAAAACCG
CTGCATCATTAAATCAATACATTAATCAAACCGCAAAGCTGGATGAATACACCCATGAGGTCTATGAAAAAGACCAGGTG
GTACAAAATTTTTACGGTGTCCACCGCTGGGGAACGCCATTCAATACGACCTACGGTAAAGCTGAAAACGAGAGTGCAAA
GCAGAAGTATTATCGTGATGCAGCCCAGATGCGCATACTGATTGACCGTCTTTGCGCTCCAGATTTGCCGCCAATTCAAG
CGTTAATCGAAAATATTAAACAGCACTGGCCAGAGGGCGTAGTGACTGCCTCTTTTGAAGGGAAACCGATGTTTGCCGGT
ATCATTCGCGTGATGTTTCCTGAAACGGCGCATCTATCCGAAACGGTTCCACATGTGGATTGCCTGCCATTTTCCGTTGC
CGAGTTAGAGCATCAATTCAGCGCTAATATTTATATTGATACACCACCTGTTGGCGGTGAATTAGTCGTCTGGGATACTG
AGGCCTTTTCCTTCGCCGAAGTCGCGCTATTTGAGGGAGGAAAACTGCCCGAAGAGCCTTTGCAGCGGCCTCTGCGCATT
CAACCACAGAAAAATGAGCTGGTGATCATCAATACCCGCCGCCCTCACGCCATTTGCGGGTTTGATTCAGGCAAACGAAT
CAGCATGCAGTCATTTATAGGTTACAACACGAACCAGCCGTTCTATTTCTGGTGTTAA

Upstream 100 bases:

>100_bases
CTGCTCGTCAATAAGACAATATCTCATCATGTTATCCCTTAGCAGAATTATCGTATTATTTAAAATGATAGGGTTTCTAA
ATTAATGGAGCCAAATCATT

Downstream 100 bases:

>100_bases
TGACTTCAAAATGAGAGCTTTTTATGACTCCTGAAGAGTTTCGCCGCCATGGCTATGCCATGATCGACCTGATTGCTGAT
TACCGACAAAATATCGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTSLSITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGGILAIRIPNYCPEKTAASLNQYINQTAKLDEYTHEVYEKDQV
VQNFYGVHRWGTPFNTTYGKAENESAKQKYYRDAAQMRILIDRLCAPDLPPIQALIENIKQHWPEGVVTASFEGKPMFAG
IIRVMFPETAHLSETVPHVDCLPFSVAELEHQFSANIYIDTPPVGGELVVWDTEAFSFAEVALFEGGKLPEEPLQRPLRI
QPQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC

Sequences:

>Translated_285_residues
MTSLSITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGGILAIRIPNYCPEKTAASLNQYINQTAKLDEYTHEVYEKDQV
VQNFYGVHRWGTPFNTTYGKAENESAKQKYYRDAAQMRILIDRLCAPDLPPIQALIENIKQHWPEGVVTASFEGKPMFAG
IIRVMFPETAHLSETVPHVDCLPFSVAELEHQFSANIYIDTPPVGGELVVWDTEAFSFAEVALFEGGKLPEEPLQRPLRI
QPQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC
>Mature_284_residues
TSLSITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGGILAIRIPNYCPEKTAASLNQYINQTAKLDEYTHEVYEKDQVV
QNFYGVHRWGTPFNTTYGKAENESAKQKYYRDAAQMRILIDRLCAPDLPPIQALIENIKQHWPEGVVTASFEGKPMFAGI
IRVMFPETAHLSETVPHVDCLPFSVAELEHQFSANIYIDTPPVGGELVVWDTEAFSFAEVALFEGGKLPEEPLQRPLRIQ
PQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32472; Mature: 32341

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLSITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGGILAIRIPNYCPEKTAASLNQY
CCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHH
INQTAKLDEYTHEVYEKDQVVQNFYGVHRWGTPFNTTYGKAENESAKQKYYRDAAQMRIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IDRLCAPDLPPIQALIENIKQHWPEGVVTASFEGKPMFAGIIRVMFPETAHLSETVPHVD
HHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHCCCCCC
CLPFSVAELEHQFSANIYIDTPPVGGELVVWDTEAFSFAEVALFEGGKLPEEPLQRPLRI
CCCHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCHHHHHEECCCCCCHHHHCCCEEE
QPQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC
CCCCCCEEEEECCCCCEEECCCCCCEEEHHHHHCCCCCCCEEEEC
>Mature Secondary Structure 
TSLSITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGGILAIRIPNYCPEKTAASLNQY
CCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHH
INQTAKLDEYTHEVYEKDQVVQNFYGVHRWGTPFNTTYGKAENESAKQKYYRDAAQMRIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IDRLCAPDLPPIQALIENIKQHWPEGVVTASFEGKPMFAGIIRVMFPETAHLSETVPHVD
HHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHCCCCCC
CLPFSVAELEHQFSANIYIDTPPVGGELVVWDTEAFSFAEVALFEGGKLPEEPLQRPLRI
CCCHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCHHHHHEECCCCCCHHHHCCCEEE
QPQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC
CCCCCCEEEEECCCCCEEECCCCCCEEEHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA