| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is mocC [H]
Identifier: 51595426
GI number: 51595426
Start: 1297516
End: 1298436
Strand: Direct
Name: mocC [H]
Synonym: YPTB1079
Alternate gene names: 51595426
Gene position: 1297516-1298436 (Clockwise)
Preceding gene: 51595425
Following gene: 51595427
Centisome position: 27.35
GC content: 55.37
Gene sequence:
>921_bases GTGCGAAAAACAGAAGCTGATCGGCATACCACCGCGGTGCAGTTAGGCATTAATCCGCTGACATGGACTAACGACGATCT GCCTTCTCTGGGGGCGGAAACATCGCTTGAAACCTGCCTGAGCGAAGGTAAAGAGGCGGGTTTTGCGGGCTTTGAACTGG GCAATAAATTTTCACGCGAGGCGGGGGTTTTAGGGCCAATTCTAGAGCATCATCAACTGAAATTGGTCTCTGGGTGGTAT TCCGGGCGGCTGTTGGAACGCTCGGTTGAAGAGGAGATTGTGGCGGTTCGGTCACATCTGGCACTGCTGCGTGAACTGGG GGCTAAGGTGATGGTATTTGCTGAAGTGTCCGGTTGTATTCATGGTGAACAGCAAACGCCAGTGCATCTGCGCCCAAGGT TTCCGCCAGCGCGTTGGGCGGAGTATGGCGCGAAGCTCACCGCCTTTGCCCGTTACACGCAGGCACTGGGGGTGCAGATT GCTTACCACCACCATATGGGCACGGTGATCGAAAGCGCGCAAGATATCGATAATCTGATGATTCATACTGGCGAAGAGGT CGGGCTGCTACTCGACACGGGCCACCTCACCTTTGCGGGGGCGGATCCGCTGGCGGTGGCACAACGCTGGATTGCGCGGA TCAACCATGTCCATTGCAAAGATGTGCGCACGTCGGTGCTGGCCGATGTCAAAAACCGTAAAACCAGTTTTCTGGACGCG GTGTTGAGTGGCGTATTTACCGTTCCGGGTGACGGCGGTGTGGACTATCCACTCATCATGGCGTTACTCAAACAACACGG TTATCAGGGCTGGCTGGTGGTCGAGGCAGAGCAAGATCCTAATGTCGCCCACCCAATGACCTATGCGCGCATGGGCTACC ACAATTTAAGCCGTCTGGCACATAACGCTGGGCTGATTTAA
Upstream 100 bases:
>100_bases AATAGAACGTGATCGGAAAGCAGAGGTTGTTCGAAAAGCAGAAGTTAATCAGAAAATAGACATTGTTCGAAAAACAGAGA TAGTTCGAAAAACAGAGACA
Downstream 100 bases:
>100_bases GGGGGTCATATGTCACGTTTATTATCACGCAGGCAGGCACCGGATGAGCGGGGCCTGACGCAGCGAATCACTCCAGCGCA GGCGGGCTGGGGGTATGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MRKTEADRHTTAVQLGINPLTWTNDDLPSLGAETSLETCLSEGKEAGFAGFELGNKFSREAGVLGPILEHHQLKLVSGWY SGRLLERSVEEEIVAVRSHLALLRELGAKVMVFAEVSGCIHGEQQTPVHLRPRFPPARWAEYGAKLTAFARYTQALGVQI AYHHHMGTVIESAQDIDNLMIHTGEEVGLLLDTGHLTFAGADPLAVAQRWIARINHVHCKDVRTSVLADVKNRKTSFLDA VLSGVFTVPGDGGVDYPLIMALLKQHGYQGWLVVEAEQDPNVAHPMTYARMGYHNLSRLAHNAGLI
Sequences:
>Translated_306_residues MRKTEADRHTTAVQLGINPLTWTNDDLPSLGAETSLETCLSEGKEAGFAGFELGNKFSREAGVLGPILEHHQLKLVSGWY SGRLLERSVEEEIVAVRSHLALLRELGAKVMVFAEVSGCIHGEQQTPVHLRPRFPPARWAEYGAKLTAFARYTQALGVQI AYHHHMGTVIESAQDIDNLMIHTGEEVGLLLDTGHLTFAGADPLAVAQRWIARINHVHCKDVRTSVLADVKNRKTSFLDA VLSGVFTVPGDGGVDYPLIMALLKQHGYQGWLVVEAEQDPNVAHPMTYARMGYHNLSRLAHNAGLI >Mature_306_residues MRKTEADRHTTAVQLGINPLTWTNDDLPSLGAETSLETCLSEGKEAGFAGFELGNKFSREAGVLGPILEHHQLKLVSGWY SGRLLERSVEEEIVAVRSHLALLRELGAKVMVFAEVSGCIHGEQQTPVHLRPRFPPARWAEYGAKLTAFARYTQALGVQI AYHHHMGTVIESAQDIDNLMIHTGEEVGLLLDTGHLTFAGADPLAVAQRWIARINHVHCKDVRTSVLADVKNRKTSFLDA VLSGVFTVPGDGGVDYPLIMALLKQHGYQGWLVVEAEQDPNVAHPMTYARMGYHNLSRLAHNAGLI
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 33635; Mature: 33635
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTEADRHTTAVQLGINPLTWTNDDLPSLGAETSLETCLSEGKEAGFAGFELGNKFSRE CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCCHHHHCCHHHHH AGVLGPILEHHQLKLVSGWYSGRLLERSVEEEIVAVRSHLALLRELGAKVMVFAEVSGCI CCCHHHHHHHHHEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHC HGEQQTPVHLRPRFPPARWAEYGAKLTAFARYTQALGVQIAYHHHMGTVIESAQDIDNLM CCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHH IHTGEEVGLLLDTGHLTFAGADPLAVAQRWIARINHVHCKDVRTSVLADVKNRKTSFLDA HCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VLSGVFTVPGDGGVDYPLIMALLKQHGYQGWLVVEAEQDPNVAHPMTYARMGYHNLSRLA HHHCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH HNAGLI HHCCCC >Mature Secondary Structure MRKTEADRHTTAVQLGINPLTWTNDDLPSLGAETSLETCLSEGKEAGFAGFELGNKFSRE CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCCHHHHCCHHHHH AGVLGPILEHHQLKLVSGWYSGRLLERSVEEEIVAVRSHLALLRELGAKVMVFAEVSGCI CCCHHHHHHHHHEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHC HGEQQTPVHLRPRFPPARWAEYGAKLTAFARYTQALGVQIAYHHHMGTVIESAQDIDNLM CCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHH IHTGEEVGLLLDTGHLTFAGADPLAVAQRWIARINHVHCKDVRTSVLADVKNRKTSFLDA HCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VLSGVFTVPGDGGVDYPLIMALLKQHGYQGWLVVEAEQDPNVAHPMTYARMGYHNLSRLA HHHCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH HNAGLI HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]