| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is ybaN
Identifier: 51595340
GI number: 51595340
Start: 1189469
End: 1189849
Strand: Direct
Name: ybaN
Synonym: YPTB0990
Alternate gene names: 51595340
Gene position: 1189469-1189849 (Clockwise)
Preceding gene: 51595337
Following gene: 51595341
Centisome position: 25.07
GC content: 45.67
Gene sequence:
>381_bases ATGTCTCGCTGGTTATTAATAGCTCTGGGGTGGTTGGCAGTGGTATTGGGAACACTCGGTGTTGTGCTTCCTCTTTTACC CACAACACCATTTTTACTTTTGGCAGCGTGGTGCTTTGCTCGCTCCTCTCCCCGTTTTCATCATTGGTTGCTTTACCGCT CATGGTTTGGCAGTTATCTGCGCACATGGCAGCAACATCGTGCTTTACCTCCGGGCACTAAATGGAAAGCAGTTTTGGTG ACGGTAATGACTTTTGCTGTTTCACTCTGGCTGGTGAAAATTTGGTGGGTAAAGGGAATGCTACTTTTGATGTTAATCGT ATTATTAACTTTTATGTTGCGGATGCCAGTTATTGACCCATCGCAACAAAAACGGCACTGA
Upstream 100 bases:
>100_bases AATAGTGACAACAATAAGTGACAACAATATTTGTTGATGGTCGGCACTACATGCGTTAATGATAACGCTTTCTTGACGAA AGTAACGATAAAGGGAGCTT
Downstream 100 bases:
>100_bases ACACTGCACATCAGTTGCTTTTTGGTGCTGGTTTGCATAAATTTGAGTGTTTCGTGCGCGGGGGTTATCCCTTGTTACGT CCTTAAGGCTAAGGATGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSRWLLIALGWLAVVLGTLGVVLPLLPTTPFLLLAAWCFARSSPRFHHWLLYRSWFGSYLRTWQQHRALPPGTKWKAVLV TVMTFAVSLWLVKIWWVKGMLLLMLIVLLTFMLRMPVIDPSQQKRH
Sequences:
>Translated_126_residues MSRWLLIALGWLAVVLGTLGVVLPLLPTTPFLLLAAWCFARSSPRFHHWLLYRSWFGSYLRTWQQHRALPPGTKWKAVLV TVMTFAVSLWLVKIWWVKGMLLLMLIVLLTFMLRMPVIDPSQQKRH >Mature_125_residues SRWLLIALGWLAVVLGTLGVVLPLLPTTPFLLLAAWCFARSSPRFHHWLLYRSWFGSYLRTWQQHRALPPGTKWKAVLVT VMTFAVSLWLVKIWWVKGMLLLMLIVLLTFMLRMPVIDPSQQKRH
Specific function: Unknown
COG id: COG2832
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786674, Length=124, Percent_Identity=68.5483870967742, Blast_Score=170, Evalue=3e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007401 [H]
Pfam domain/function: PF04304 DUF454 [H]
EC number: NA
Molecular weight: Translated: 14737; Mature: 14606
Theoretical pI: Translated: 12.32; Mature: 12.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRWLLIALGWLAVVLGTLGVVLPLLPTTPFLLLAAWCFARSSPRFHHWLLYRSWFGSYL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RTWQQHRALPPGTKWKAVLVTVMTFAVSLWLVKIWWVKGMLLLMLIVLLTFMLRMPVIDP HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SQQKRH CCCCCC >Mature Secondary Structure SRWLLIALGWLAVVLGTLGVVLPLLPTTPFLLLAAWCFARSSPRFHHWLLYRSWFGSYL CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RTWQQHRALPPGTKWKAVLVTVMTFAVSLWLVKIWWVKGMLLLMLIVLLTFMLRMPVIDP HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SQQKRH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]