Click here to switch to the map view.

The map label for this gene is yhbV [H]

Identifier: 51594846

GI number: 51594846

Start: 583993

End: 584871

Strand: Reverse

Name: yhbV [H]

Synonym: YPTB0494

Alternate gene names: 51594846

Gene position: 584871-583993 (Counterclockwise)

Preceding gene: 51594847

Following gene: 51594842

Centisome position: 12.33

GC content: 50.74

Gene sequence:

>879_bases
ATGAAGTACGCCTTAGGCGCAGTACTCTATTACTGGCCAAAAACTGAGATTGAAACCTTTTATCACGCGGCGGCCAACAG
CAGTGCCGATATTATTTATCTGGGTGAAAATGTCTGTACCAAGCGCCGTGAAATGAAGGTCGGTGACTGGTTGGCCTTAG
CCAAAGCCGTCGCAAGCAGCGGCAAACAAGTGGTGATTTCTACGCTGGCGCTGTTACAGGCACCATCCGAATTGAATGAA
CTGAAACGTTATGTGGAGAATGGCGAGTTTTTACTGGAAGCCAATGACCTCGGCGCGGTGAATATGGCCGCCGAGCGCGG
ACTACCGTTTGTCGCTGGCCACGCCCTGAACTGCTATAACGCCTATACCCTGCGCATTTTACACCGTCAGGGCATGATAC
GTTGGTGTATGCCGGTTGAGCTGTCCCGTGACTGGTTGAGCAATGTACTGCAACAGTGCGACGCGTTAGGATTTCGTCAT
CAATTTGAAGTTGAAGTTCTGAGTTACGGTCATCTGCCGCTGGCGTATTCCGCCCGTTGCTTTACCGCTCGCTCAGAAGA
CCGCGCCAAAGATGAGTGCGAGACCTGCTGCATTAAATATCCACAAGGGCGCAAGGTGATGTCACAAGAAGATCAACAGG
TCTTCATCCTAAACGGTATTCAGACCCAAAGTGGCTACTGCTATAACCTCGGCAATGATCTGATCTCAATGCAGGGGTTA
GTGGATATCATCCGTCTTTCGCCACAAGGCCTTGAGACGCTTAGCGTTATCGATCAATTCCGTGCTAACGAACAGGGTCT
GTCACCGCTACCTGTAGCCAATAAAGCAGATTGTAACGGCTACTGGCATCGTGTTGCCGGGTTAGAACTGGTGTCGTAA

Upstream 100 bases:

>100_bases
CCGCCAAAGCAGAATGGATGGAGCAACTGAGCGCAATGTCCGAAGGTACCCAGACAACACTGGGCGCTTATCATCGTAAG
TGGCAGTAGCCGGAGGAAAT

Downstream 100 bases:

>100_bases
ACAGCCTTGCCTTATCAAGTAATAACAGGGAGGTCATTGCTGGCCTCCCTGTTATTCATGTTTATTAACGCTTAATCACA
GCGGCATTTTATAGACTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKYALGAVLYYWPKTEIETFYHAAANSSADIIYLGENVCTKRREMKVGDWLALAKAVASSGKQVVISTLALLQAPSELNE
LKRYVENGEFLLEANDLGAVNMAAERGLPFVAGHALNCYNAYTLRILHRQGMIRWCMPVELSRDWLSNVLQQCDALGFRH
QFEVEVLSYGHLPLAYSARCFTARSEDRAKDECETCCIKYPQGRKVMSQEDQQVFILNGIQTQSGYCYNLGNDLISMQGL
VDIIRLSPQGLETLSVIDQFRANEQGLSPLPVANKADCNGYWHRVAGLELVS

Sequences:

>Translated_292_residues
MKYALGAVLYYWPKTEIETFYHAAANSSADIIYLGENVCTKRREMKVGDWLALAKAVASSGKQVVISTLALLQAPSELNE
LKRYVENGEFLLEANDLGAVNMAAERGLPFVAGHALNCYNAYTLRILHRQGMIRWCMPVELSRDWLSNVLQQCDALGFRH
QFEVEVLSYGHLPLAYSARCFTARSEDRAKDECETCCIKYPQGRKVMSQEDQQVFILNGIQTQSGYCYNLGNDLISMQGL
VDIIRLSPQGLETLSVIDQFRANEQGLSPLPVANKADCNGYWHRVAGLELVS
>Mature_292_residues
MKYALGAVLYYWPKTEIETFYHAAANSSADIIYLGENVCTKRREMKVGDWLALAKAVASSGKQVVISTLALLQAPSELNE
LKRYVENGEFLLEANDLGAVNMAAERGLPFVAGHALNCYNAYTLRILHRQGMIRWCMPVELSRDWLSNVLQQCDALGFRH
QFEVEVLSYGHLPLAYSARCFTARSEDRAKDECETCCIKYPQGRKVMSQEDQQVFILNGIQTQSGYCYNLGNDLISMQGL
VDIIRLSPQGLETLSVIDQFRANEQGLSPLPVANKADCNGYWHRVAGLELVS

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=290, Percent_Identity=75.8620689655172, Blast_Score=479, Evalue=1e-137,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 32715; Mature: 32715

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYALGAVLYYWPKTEIETFYHAAANSSADIIYLGENVCTKRREMKVGDWLALAKAVASS
CCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHCC
GKQVVISTLALLQAPSELNELKRYVENGEFLLEANDLGAVNMAAERGLPFVAGHALNCYN
CCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHCCCCEEECCCCCCCC
AYTLRILHRQGMIRWCMPVELSRDWLSNVLQQCDALGFRHQFEVEVLSYGHLPLAYSARC
HHEEEEEHHCCCEEEECCHHCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEECCEE
FTARSEDRAKDECETCCIKYPQGRKVMSQEDQQVFILNGIQTQSGYCYNLGNDLISMQGL
EECCCCCCHHHHHHHHHEECCCCCCCCCCCCCEEEEEECEECCCCEEEECCCHHHHHHHH
VDIIRLSPQGLETLSVIDQFRANEQGLSPLPVANKADCNGYWHRVAGLELVS
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCEEECC
>Mature Secondary Structure
MKYALGAVLYYWPKTEIETFYHAAANSSADIIYLGENVCTKRREMKVGDWLALAKAVASS
CCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHCC
GKQVVISTLALLQAPSELNELKRYVENGEFLLEANDLGAVNMAAERGLPFVAGHALNCYN
CCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHCCCCEEECCCCCCCC
AYTLRILHRQGMIRWCMPVELSRDWLSNVLQQCDALGFRHQFEVEVLSYGHLPLAYSARC
HHEEEEEHHCCCEEEECCHHCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEECCEE
FTARSEDRAKDECETCCIKYPQGRKVMSQEDQQVFILNGIQTQSGYCYNLGNDLISMQGL
EECCCCCCHHHHHHHHHEECCCCCCCCCCCCCEEEEEECEECCCCEEEECCCHHHHHHHH
VDIIRLSPQGLETLSVIDQFRANEQGLSPLPVANKADCNGYWHRVAGLELVS
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]