Click here to switch to the map view.

The map label for this gene is yhbW [H]

Identifier: 51594842

GI number: 51594842

Start: 576592

End: 577647

Strand: Reverse

Name: yhbW [H]

Synonym: YPTB0490

Alternate gene names: 51594842

Gene position: 577647-576592 (Counterclockwise)

Preceding gene: 51594846

Following gene: 51594824

Centisome position: 12.17

GC content: 53.31

Gene sequence:

>1056_bases
ATGGACGATTCTATGATTGATAACACCGGTTCTGTAGTCGATAAAAATACTGTCCCCCTTTCTGTGCTCGATTTATCCCC
GATAGCACAGGGTAAAACAGCACGGGATGCATTTCATGCTTCACTGGATTTAGCACAACATGCTGAAAAATGGGGATATC
AGCGCTACTGGCTCGCTGAACATCACAATATGACCGGTATCGCCAGCGCGGCGACGTCGGTGCTGATCGGCTATATTGCG
GGTGGCACGAATAAGATCCGCGTCGGCGCTGGTGGTGTCATGCTGCCGAACCATTCACCGCTGGTGATTGCTGAGCAGTT
CGGTACCCTCGCGTCGCTCTACCCTGATCGTATCGATCTCGGTTTGGGCCGTGCACCCGGTAGCGATCAACGCACTATGA
TGGCGTTACGTCGCCATCTCTCTGGTGAAGTGGATAACTTCCCAGCCGATGTGCGTGAACTGCAGAATTACTTTGCCGAA
GTACAACCGGGGCAAGCAGTACAAGCAGTGCCAGGCCAGGGGCTGCATGTTCCGCTGTGGCTGCTAGGCTCCAGTCTGTA
TAGCGCACAACTGGCCGCCGCGATGGGCCTGCCGTTTGCCTTTGCCTCACATTTCGCCCCAGATATGTTGTTACAGGCAC
TCTCGCTATACCGTGAGAACTTTACACCATCCGCTCAATGGCCAAAGCCCTATGCCATTGTCTGCGTAAACGTGGTCGCG
GCAGATAGCGAGCGCGATGCACGCTTCCTGTTTACCTCAATGCAGCAACAATTTGTCAGCCTGCGCCGGGGGACACCGGG
CCAGTTACCGCCGCCAGTGGAGAATATGGCGGCAATTTGCTCGCCAGCGGAACAGTTTGGTGTCGATCAGGCGCTGCGCT
TATCCATCGTCGGTGATAAAAGTAAAGTACGCCATGGGCTTCAGTCATTATTACGGGAAACACAGGCTGACGAATTGATG
ATTAATGGCCAAATTTTTGATCATCAAGCACGGCTGTATTCCTTTAAAACCGTTGCCAGCTTACAGCAAGATCTGATGCA
TACTCCGCGCCGGTAA

Upstream 100 bases:

>100_bases
TTCAAATACTCATCTGTAATTTCAAGTACCCACTCTCAACTTCAAGTACCAACAAGAAGATAATGCGTTCGCCCTTCAAG
CGACTCGACATAAGGTTAAG

Downstream 100 bases:

>100_bases
TATCGTAGGCAGATACAAATCACAGCCATAAAAAAACCAGCCCGAAGGCTGGTTTGAGGTTGTTGACAAAGTGCCCGCGA
CGGAGAGAACAGGCAGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MDDSMIDNTGSVVDKNTVPLSVLDLSPIAQGKTARDAFHASLDLAQHAEKWGYQRYWLAEHHNMTGIASAATSVLIGYIA
GGTNKIRVGAGGVMLPNHSPLVIAEQFGTLASLYPDRIDLGLGRAPGSDQRTMMALRRHLSGEVDNFPADVRELQNYFAE
VQPGQAVQAVPGQGLHVPLWLLGSSLYSAQLAAAMGLPFAFASHFAPDMLLQALSLYRENFTPSAQWPKPYAIVCVNVVA
ADSERDARFLFTSMQQQFVSLRRGTPGQLPPPVENMAAICSPAEQFGVDQALRLSIVGDKSKVRHGLQSLLRETQADELM
INGQIFDHQARLYSFKTVASLQQDLMHTPRR

Sequences:

>Translated_351_residues
MDDSMIDNTGSVVDKNTVPLSVLDLSPIAQGKTARDAFHASLDLAQHAEKWGYQRYWLAEHHNMTGIASAATSVLIGYIA
GGTNKIRVGAGGVMLPNHSPLVIAEQFGTLASLYPDRIDLGLGRAPGSDQRTMMALRRHLSGEVDNFPADVRELQNYFAE
VQPGQAVQAVPGQGLHVPLWLLGSSLYSAQLAAAMGLPFAFASHFAPDMLLQALSLYRENFTPSAQWPKPYAIVCVNVVA
ADSERDARFLFTSMQQQFVSLRRGTPGQLPPPVENMAAICSPAEQFGVDQALRLSIVGDKSKVRHGLQSLLRETQADELM
INGQIFDHQARLYSFKTVASLQQDLMHTPRR
>Mature_351_residues
MDDSMIDNTGSVVDKNTVPLSVLDLSPIAQGKTARDAFHASLDLAQHAEKWGYQRYWLAEHHNMTGIASAATSVLIGYIA
GGTNKIRVGAGGVMLPNHSPLVIAEQFGTLASLYPDRIDLGLGRAPGSDQRTMMALRRHLSGEVDNFPADVRELQNYFAE
VQPGQAVQAVPGQGLHVPLWLLGSSLYSAQLAAAMGLPFAFASHFAPDMLLQALSLYRENFTPSAQWPKPYAIVCVNVVA
ADSERDARFLFTSMQQQFVSLRRGTPGQLPPPVENMAAICSPAEQFGVDQALRLSIVGDKSKVRHGLQSLLRETQADELM
INGQIFDHQARLYSFKTVASLQQDLMHTPRR

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=335, Percent_Identity=70.1492537313433, Blast_Score=494, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 38349; Mature: 38349

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDSMIDNTGSVVDKNTVPLSVLDLSPIAQGKTARDAFHASLDLAQHAEKWGYQRYWLAE
CCCCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHH
HHNMTGIASAATSVLIGYIAGGTNKIRVGAGGVMLPNHSPLVIAEQFGTLASLYPDRIDL
CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCCCCEEEHHHHHHHHHHCCCHHCC
GLGRAPGSDQRTMMALRRHLSGEVDNFPADVRELQNYFAEVQPGQAVQAVPGQGLHVPLW
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCEEHHH
LLGSSLYSAQLAAAMGLPFAFASHFAPDMLLQALSLYRENFTPSAQWPKPYAIVCVNVVA
HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEE
ADSERDARFLFTSMQQQFVSLRRGTPGQLPPPVENMAAICSPAEQFGVDQALRLSIVGDK
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHCCCCEEEEEEECCH
SKVRHGLQSLLRETQADELMINGQIFDHQARLYSFKTVASLQQDLMHTPRR
HHHHHHHHHHHHHCCCCCEEECCEEECCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDDSMIDNTGSVVDKNTVPLSVLDLSPIAQGKTARDAFHASLDLAQHAEKWGYQRYWLAE
CCCCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHH
HHNMTGIASAATSVLIGYIAGGTNKIRVGAGGVMLPNHSPLVIAEQFGTLASLYPDRIDL
CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCCCCEEEHHHHHHHHHHCCCHHCC
GLGRAPGSDQRTMMALRRHLSGEVDNFPADVRELQNYFAEVQPGQAVQAVPGQGLHVPLW
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCEEHHH
LLGSSLYSAQLAAAMGLPFAFASHFAPDMLLQALSLYRENFTPSAQWPKPYAIVCVNVVA
HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEE
ADSERDARFLFTSMQQQFVSLRRGTPGQLPPPVENMAAICSPAEQFGVDQALRLSIVGDK
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHCCCCEEEEEEECCH
SKVRHGLQSLLRETQADELMINGQIFDHQARLYSFKTVASLQQDLMHTPRR
HHHHHHHHHHHHHCCCCCEEECCEEECCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]