| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51594590
Identifier: 51594590
GI number: 51594590
Start: 277141
End: 277827
Strand: Reverse
Name: 51594590
Synonym: YPTB0235
Alternate gene names: NA
Gene position: 277827-277141 (Counterclockwise)
Preceding gene: 51594591
Following gene: 51594589
Centisome position: 5.86
GC content: 50.95
Gene sequence:
>687_bases ATGAAATACCTTTATTCGATACTCAGCATCGCGCTGTTACTGGCCCCTGGTACTGCCACTTACGGCCAACTGCTTGCTAC CCCCACCCGTATTGCGGTAGAGGCACAAGAGCAGAAGCGAACCGTACAGGTGTATAACAGCGGCGATACACCGCTTTATC TGGATATCACATTACAACGTGTGGATAACCCAGGCGTGAACCCCGAGCGTAAAACACCCATCAGTGAAATCTCTCAGCCT GAAATGATTTTTAATCCTAACCGCATTACGTTAGGGCCGAGACAAAAGCGGGATATTACGCTGATCCCACTCAAATCGCC GGTACAGGAAACCCTTTACCGCCTGTATATCAACCCCGTGCTCAATATCAAAGCGGTTGGCGATGGGGAGGATAAAAGTA AAGTTCATGCCCCAATGACCATCAGTATTGGTTATGGCGTGCTGATTCATCATTTGCCACCGGCGGCGGCACAAACTCGT CATTGGCAACATCAATGCTCAGCTACTGGCGAGCTAGCACTCACCGCTACCGGAACGGTGCACAGTAAGTTTAAGCAGCT CGAATCGGGTGGTAACCCCGCACTGGCCGACAGTCTAAATCTGTATCCGGGCACCGCGCTCACACTGCCCGTCAAACAAC TCAATGGTGAGGTGGACGGTGAAAAATTTAGTCTTCGCTGCCATTAG
Upstream 100 bases:
>100_bases TAACCGTCCAAGGCCCTTCTGGCCGTTACCGCTGTGATATGCATTCGCAACCTACTCATATTTACCTTTGCCACGCCGAT TAATACCGATAGGAATCCTC
Downstream 100 bases:
>100_bases CCTCTTGCCGCTCAGTGCCGCTGGCGTGATCGATATTCAGCCACAGGTCGTGGAATTACAGCAGGAGAATACTGTGGTTA CCGTGATCAACCATGGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKYLYSILSIALLLAPGTATYGQLLATPTRIAVEAQEQKRTVQVYNSGDTPLYLDITLQRVDNPGVNPERKTPISEISQP EMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPVLNIKAVGDGEDKSKVHAPMTISIGYGVLIHHLPPAAAQTR HWQHQCSATGELALTATGTVHSKFKQLESGGNPALADSLNLYPGTALTLPVKQLNGEVDGEKFSLRCH
Sequences:
>Translated_228_residues MKYLYSILSIALLLAPGTATYGQLLATPTRIAVEAQEQKRTVQVYNSGDTPLYLDITLQRVDNPGVNPERKTPISEISQP EMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPVLNIKAVGDGEDKSKVHAPMTISIGYGVLIHHLPPAAAQTR HWQHQCSATGELALTATGTVHSKFKQLESGGNPALADSLNLYPGTALTLPVKQLNGEVDGEKFSLRCH >Mature_228_residues MKYLYSILSIALLLAPGTATYGQLLATPTRIAVEAQEQKRTVQVYNSGDTPLYLDITLQRVDNPGVNPERKTPISEISQP EMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPVLNIKAVGDGEDKSKVHAPMTISIGYGVLIHHLPPAAAQTR HWQHQCSATGELALTATGTVHSKFKQLESGGNPALADSLNLYPGTALTLPVKQLNGEVDGEKFSLRCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24999; Mature: 24999
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLYSILSIALLLAPGTATYGQLLATPTRIAVEAQEQKRTVQVYNSGDTPLYLDITLQR CHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEEE VDNPGVNPERKTPISEISQPEMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPV CCCCCCCCCCCCCHHHCCCCCEEECCCEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCE LNIKAVGDGEDKSKVHAPMTISIGYGVLIHHLPPAAAQTRHWQHQCSATGELALTATGTV EEEEEECCCCCCCEEECCEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCHH HSKFKQLESGGNPALADSLNLYPGTALTLPVKQLNGEVDGEKFSLRCH HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCEEEEEEC >Mature Secondary Structure MKYLYSILSIALLLAPGTATYGQLLATPTRIAVEAQEQKRTVQVYNSGDTPLYLDITLQR CHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEEE VDNPGVNPERKTPISEISQPEMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPV CCCCCCCCCCCCCHHHCCCCCEEECCCEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCE LNIKAVGDGEDKSKVHAPMTISIGYGVLIHHLPPAAAQTRHWQHQCSATGELALTATGTV EEEEEECCCCCCCEEECCEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCHH HSKFKQLESGGNPALADSLNLYPGTALTLPVKQLNGEVDGEKFSLRCH HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA