| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51594591
Identifier: 51594591
GI number: 51594591
Start: 277845
End: 280178
Strand: Reverse
Name: 51594591
Synonym: YPTB0236
Alternate gene names: NA
Gene position: 280178-277845 (Counterclockwise)
Preceding gene: 51594592
Following gene: 51594590
Centisome position: 5.91
GC content: 47.77
Gene sequence:
>2334_bases ATGGCCTATTATTCAAAAATTAATCATAGCTTACTTTTTACTTTAGCCTTATTCACACTAAAGCTCGCTCATGCAGAAGC AGTTAAAATAGAGTATTTAGTGCCAATGGGGTTTTCCGCGGCTGAAGAGAACAACTCACTTCAGTTATTAGGGGTATTAG ACAGTAAGACATTGCCCAGTCCTATTACCTTCTCAGAAGAAAAACAACAACTGCAATTTAATCAACAGAACGATCGGCAT AATAATATTAGTGAAGAATCTATTATTTTATTGGGTAAGATATTATCTCAAATACCGTATTTACAGTGTAAAACCGGCTG TGATTATACTTTATCGGGTCACCGCGTGGCGTTAGATAAAGTGAATAACACATTGACGATCACCAATAATAATAATCGTT ATCTGATGCCAACCACGACATGGGGGTTGGTCAGCAATCAATCTCTCGATTTGCGAATGACAGCAGCCCACTATCGGGCG ATGTCAGTCCGTGGTCAAAGTTACATCGGCTTGCCATGGCAATCTTATGGCTTTGCATCTTGGTTTTATAACGCGATTCA GTCACAAAATACGCTGCAATCACAGAACACCATGCCATCGCAGAGCACCTATCAGCCAGTTAATCGCCCTCAATATCAGC GCCTAACCCAAAAAGGGATCGGCAGTTGGTATTTGCAAAAGAACTTCTCGGCACTCTATTTACGCACCGGTCGGCAAAAC AACCTGGATAACAACGCAGGTAGCGTTCACACCCTGATCAACCCTGCGTTGGACCAATTTGTAACACTCGGTAGTCAAAG CTATCTGGCCATCGATAAGCCTTCCACCGGCAGTATCGTGCTCTATGCCGCTCAAGATGGTGACTACGAAATATACCGCG ATAATCAGCTCATTCGCCGCATCCCCGCTCAATTGGGTCGCAACGAGATAGATTACAGCCAACTACCAGGGGGCTATTAC AACGTTGAGATTCGTTTAGTTGATCGTCTTGGGCGGATCGTCAGCCAGGAAAACCAAACCATCAGCAATATTGGCAATCA GACCAATAATGGTTGGTTTCTGACAATGGGCAAAGGGCCTGCAAAGGGTAAAAAAACGCCCCGTTTAGTCCAATTTGGAC GCAGCAGGGTGATAGAAAGCGTACAAACCAATATCACGCTACTTAAAGATGATGCCCATCACTGGGCCGTGGAAGCGAAC GTCTCACGCCCTTTAAGCCTCAATAAGGTGAATATCACCCCAACAGGGGGCTTGATGTCAGGAGAGAAACGCAGTGGAGG TTACGTTCGCTTAAATGGTGGCAACAATACACTGGGTTACTTTTCATTAGCTCGCTATCAGTCACCTTATGTCTCGCGAT ACGCACCTGACTCAGGCAGTACCTCAGGCTCCTATACCCGGCGTATTGGGCCAACCCAGCTAAGTTATCAATTCAATCAG TACCGCAATAACCGGCAGCACCGTATCCAAAGTGGTTGGGACTGGCAATTACCACAATTTAACCTCGCGTTATCCCTTGG GCTGCAAAATGGTGGGCAATGGAACAGTCACAATAATTACGGCGTCTTCCTGAACACCACCCTGTCCTTCGGCCAAAGTA ACGCCAGCATCAATACGGCTTATACCCAACAACAGTTGAATACCAGCGCCAGTTACCAGAAAGAGTTTATTGATAACTAT GGGGCCAGCACTTTGGGTGTCAGCGGTAGTGCCAGCGGGAAACTAAATAGCGTCGGCGGTTTTGCTAAACGCAGCGGGAG CCGGGGGGATATCTCTGGCCGGGTAGGCATTGATAACCAGATAACCAACGGGGGGATTAGCTATAACGGCATGTTGGCAC TCAGCTCACAGGGGGTTGCCTTGGGGCGCAGCAGTTATAGCGGAGCGGCACTCTTGATCAAAGCCCCCGCTCTGGGCGGC ACCCCCTATAGTTTTCATGTGGAGGATAGCCCAATAACCGGTGGTGGCATCTATGCGATACCGGTCCCCCGCTACCAAGA CCGTTTCTTTGTCCGTACTCACACCGACCGCAGTGATATGGATATGAATATTCAACTGCCGGTCAATATCGTACGCGCTC ACCCTGGGCAAGTTTTTTCAGGCAAAGCTGACATCACATTGAACCTGCTATACAGCGGTTTTCTCAAAAATGCACAAGGG CTACCGGTGAGCGGGGTGATTGAGGAGACGGGTGATACCGCTTATCCCAATGGGCTGTTTTCCATTAACGCCCAAAATAG GCTGCAAGCGATAACCGTCCAAGGCCCTTCTGGCCGTTACCGCTGTGATATGCATTCGCAACCTACTCATATTTACCTTT GCCACGCCGATTAA
Upstream 100 bases:
>100_bases CCTGCAATTCGAATTATTTTGGATATATACACAAATTATTTCTTTTAAAAATAAATAATTATCCTGTAAAACCACCATAA TTATAGTGGAATGGAATCCT
Downstream 100 bases:
>100_bases TACCGATAGGAATCCTCATGAAATACCTTTATTCGATACTCAGCATCGCGCTGTTACTGGCCCCTGGTACTGCCACTTAC GGCCAACTGCTTGCTACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 777; Mature: 776
Protein sequence:
>777_residues MAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPSPITFSEEKQQLQFNQQNDRH NNISEESIILLGKILSQIPYLQCKTGCDYTLSGHRVALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRA MSVRGQSYIGLPWQSYGFASWFYNAIQSQNTLQSQNTMPSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQN NLDNNAGSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLGRNEIDYSQLPGGYY NVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEAN VSRPLSLNKVNITPTGGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQ YRNNRQHRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQLNTSASYQKEFIDNY GASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGG TPYSFHVEDSPITGGGIYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGKADITLNLLYSGFLKNAQG LPVSGVIEETGDTAYPNGLFSINAQNRLQAITVQGPSGRYRCDMHSQPTHIYLCHAD
Sequences:
>Translated_777_residues MAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPSPITFSEEKQQLQFNQQNDRH NNISEESIILLGKILSQIPYLQCKTGCDYTLSGHRVALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRA MSVRGQSYIGLPWQSYGFASWFYNAIQSQNTLQSQNTMPSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQN NLDNNAGSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLGRNEIDYSQLPGGYY NVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEAN VSRPLSLNKVNITPTGGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQ YRNNRQHRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQLNTSASYQKEFIDNY GASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGG TPYSFHVEDSPITGGGIYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGKADITLNLLYSGFLKNAQG LPVSGVIEETGDTAYPNGLFSINAQNRLQAITVQGPSGRYRCDMHSQPTHIYLCHAD >Mature_776_residues AYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPSPITFSEEKQQLQFNQQNDRHN NISEESIILLGKILSQIPYLQCKTGCDYTLSGHRVALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRAM SVRGQSYIGLPWQSYGFASWFYNAIQSQNTLQSQNTMPSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQNN LDNNAGSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLGRNEIDYSQLPGGYYN VEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANV SRPLSLNKVNITPTGGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQY RNNRQHRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQLNTSASYQKEFIDNYG ASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGGT PYSFHVEDSPITGGGIYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGKADITLNLLYSGFLKNAQGL PVSGVIEETGDTAYPNGLFSINAQNRLQAITVQGPSGRYRCDMHSQPTHIYLCHAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85868; Mature: 85737
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPS CCCHHHHCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCC PITFSEEKQQLQFNQQNDRHNNISEESIILLGKILSQIPYLQCKTGCDYTLSGHRVALDK CCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEECCCEEEEEE VNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRAMSVRGQSYIGLPWQSYGFAS CCCEEEEEECCCEEEEEECEECEEECCCCEEEEEHHHEEEEEECCCEEECCCCCCCCHHH WFYNAIQSQNTLQSQNTMPSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQN HHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEECCCCC NLDNNAGSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRR CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEEECCHHHHH IPAQLGRNEIDYSQLPGGYYNVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGP HHHHHCCCCCCHHHCCCCEEEEEEEEHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCC AKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLSLNKVNITPTGGLMS CCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCC GEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQ CCCCCCCEEEECCCCCCEEEEEEEHHCCCCHHEECCCCCCCCCCEEEECCCCEEEEEHHH YRNNRQHRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTA HCCCCHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEH YTQQQLNTSASYQKEFIDNYGASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQ HHHHHHCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCC ITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFHVEDSPITGGGIYAI CCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEE PVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGKADITLNLLYSGFLKNAQG ECCCCCCEEEEEEECCCCCCCEEEEECEEEEECCCCCEECCCCCEEEEEEEHHHHCCCCC LPVSGVIEETGDTAYPNGLFSINAQNRLQAITVQGPSGRYRCDMHSQPTHIYLCHAD CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEEECC >Mature Secondary Structure AYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPS CCHHHHCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCC PITFSEEKQQLQFNQQNDRHNNISEESIILLGKILSQIPYLQCKTGCDYTLSGHRVALDK CCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEECCCEEEEEE VNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRAMSVRGQSYIGLPWQSYGFAS CCCEEEEEECCCEEEEEECEECEEECCCCEEEEEHHHEEEEEECCCEEECCCCCCCCHHH WFYNAIQSQNTLQSQNTMPSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQN HHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEECCCCC NLDNNAGSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRR CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEEECCHHHHH IPAQLGRNEIDYSQLPGGYYNVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGP HHHHHCCCCCCHHHCCCCEEEEEEEEHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCC AKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLSLNKVNITPTGGLMS CCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCC GEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQ CCCCCCCEEEECCCCCCEEEEEEEHHCCCCHHEECCCCCCCCCCEEEECCCCEEEEEHHH YRNNRQHRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTA HCCCCHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEH YTQQQLNTSASYQKEFIDNYGASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQ HHHHHHCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCC ITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFHVEDSPITGGGIYAI CCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEE PVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGKADITLNLLYSGFLKNAQG ECCCCCCEEEEEEECCCCCCCEEEEECEEEEECCCCCEECCCCCEEEEEEEHHHHCCCCC LPVSGVIEETGDTAYPNGLFSINAQNRLQAITVQGPSGRYRCDMHSQPTHIYLCHAD CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA