| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51594587
Identifier: 51594587
GI number: 51594587
Start: 274611
End: 275717
Strand: Reverse
Name: 51594587
Synonym: YPTB0232
Alternate gene names: NA
Gene position: 275717-274611 (Counterclockwise)
Preceding gene: 51594588
Following gene: 51594580
Centisome position: 5.81
GC content: 43.99
Gene sequence:
>1107_bases ATGAATATAAAAAATAAATCATTGTTTATCGGGTTATTGCTGTTATTCCTACAGCCCACAACTGCCGTAGCTAACAAATG GGCCGGAATTTATTTTTACCCGCTAGCCAGTAAGTATTCGAATTGCAAAATGACGCTATCAGAAGATAACCATCTTACTG TTTCTTTCGATGTCACACTGGCAGATCATTTATTTGATATTAGTAATAGCGACCATCTTCAACGTTGGCAAGAGCTAACT CGCTCGCAGCAACACATTATGTTGGCACAGAATAAGGCGTTACTTTATCTCTATTTTTATCGAGCCGACGGTTCAATCGA CTTTAGTCTGCAATCAGGGGAGGTTCAGGACATGTCCCTCAATGGCGTCCCTGCTCAACATATTAGCAACTATATCCGCG AGGCCATCTTTGTTAGCACACCGGCCTTTTCAAACCAAAGTTATCACGTGTCATTCAGCCTTGCGGTAAGCACACTTAAA CATATTAGAATGGGTGCCACCATTGGCGGTGTGCTCCATTCAGAAGGGCAGCAGTATTCTGTACGCTCCCCCAATGGCGT GGCTTTTAATCAATCAGGTAATCAATGCGAATTCTTTGACCCCACAACAGAGATAGCACCGGCCCATGCTTTATATATCG AGCCTAAATTCCGGCTGGGATCAGCAATATGGCAGCTAAAATCCCTCGATCTAGATCATTTACTCGATAGCACGGCTGAT AACCATGGGTTACATGCGCCATTAGTTAACGCCCCGGCTAACCGTTTTTGTATCCATTACTCATCGGTAGGTATACAAAA TCGGCGTTATATGATCAGTGCCAGTAATCTCAATGGGTTAGCTGAGAGTAGTCGCTATTTTCAGTTAAAAGATAACCAAG GGGAGCACATCATCAACTACAAGGTCACACTGAAAAATCATGAGGATAGCGAGGCTGATTTTTCACTACCCAAAGAGAAA AAGTTTGTTCAGCTAAAGAGTGATACTAGCAGCGGCGGCGAAGCACAGATGTGCTGGTCACCCCGCATTCGGGTTTACAG TACCGATACCACCGATAAAGGTCACTACACGGATACGCTGAATTTTACTATCACGCCGTTAGCCTAA
Upstream 100 bases:
>100_bases AATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAAT CGTCACGGAGAGACCATTAA
Downstream 100 bases:
>100_bases TCTCAATGACGTTATTAATCGTTAGATTATCAATAAGCTGAACACTCAATAATTCGAGTTGCAACAGAGCAATCAACGCA TAGGCAACTCGAAATATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MNIKNKSLFIGLLLLFLQPTTAVANKWAGIYFYPLASKYSNCKMTLSEDNHLTVSFDVTLADHLFDISNSDHLQRWQELT RSQQHIMLAQNKALLYLYFYRADGSIDFSLQSGEVQDMSLNGVPAQHISNYIREAIFVSTPAFSNQSYHVSFSLAVSTLK HIRMGATIGGVLHSEGQQYSVRSPNGVAFNQSGNQCEFFDPTTEIAPAHALYIEPKFRLGSAIWQLKSLDLDHLLDSTAD NHGLHAPLVNAPANRFCIHYSSVGIQNRRYMISASNLNGLAESSRYFQLKDNQGEHIINYKVTLKNHEDSEADFSLPKEK KFVQLKSDTSSGGEAQMCWSPRIRVYSTDTTDKGHYTDTLNFTITPLA
Sequences:
>Translated_368_residues MNIKNKSLFIGLLLLFLQPTTAVANKWAGIYFYPLASKYSNCKMTLSEDNHLTVSFDVTLADHLFDISNSDHLQRWQELT RSQQHIMLAQNKALLYLYFYRADGSIDFSLQSGEVQDMSLNGVPAQHISNYIREAIFVSTPAFSNQSYHVSFSLAVSTLK HIRMGATIGGVLHSEGQQYSVRSPNGVAFNQSGNQCEFFDPTTEIAPAHALYIEPKFRLGSAIWQLKSLDLDHLLDSTAD NHGLHAPLVNAPANRFCIHYSSVGIQNRRYMISASNLNGLAESSRYFQLKDNQGEHIINYKVTLKNHEDSEADFSLPKEK KFVQLKSDTSSGGEAQMCWSPRIRVYSTDTTDKGHYTDTLNFTITPLA >Mature_368_residues MNIKNKSLFIGLLLLFLQPTTAVANKWAGIYFYPLASKYSNCKMTLSEDNHLTVSFDVTLADHLFDISNSDHLQRWQELT RSQQHIMLAQNKALLYLYFYRADGSIDFSLQSGEVQDMSLNGVPAQHISNYIREAIFVSTPAFSNQSYHVSFSLAVSTLK HIRMGATIGGVLHSEGQQYSVRSPNGVAFNQSGNQCEFFDPTTEIAPAHALYIEPKFRLGSAIWQLKSLDLDHLLDSTAD NHGLHAPLVNAPANRFCIHYSSVGIQNRRYMISASNLNGLAESSRYFQLKDNQGEHIINYKVTLKNHEDSEADFSLPKEK KFVQLKSDTSSGGEAQMCWSPRIRVYSTDTTDKGHYTDTLNFTITPLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41362; Mature: 41362
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKNKSLFIGLLLLFLQPTTAVANKWAGIYFYPLASKYSNCKMTLSEDNHLTVSFDVTL CCCCCHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCCCEEEECCCCEEEEEEEEEE ADHLFDISNSDHLQRWQELTRSQQHIMLAQNKALLYLYFYRADGSIDFSLQSGEVQDMSL EEEEEECCCCHHHHHHHHHHCCCCEEEEECCCEEEEEEEEEECCEEEEEEECCCEEEEEE NGVPAQHISNYIREAIFVSTPAFSNQSYHVSFSLAVSTLKHIRMGATIGGVLHSEGQQYS CCCCHHHHHHHHHHHEEEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCHHHCCCCEEE VRSPNGVAFNQSGNQCEFFDPTTEIAPAHALYIEPKFRLGSAIWQLKSLDLDHLLDSTAD ECCCCCEEECCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHCCCC NHGLHAPLVNAPANRFCIHYSSVGIQNRRYMISASNLNGLAESSRYFQLKDNQGEHIINY CCCCCCCEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEE KVTLKNHEDSEADFSLPKEKKFVQLKSDTSSGGEAQMCWSPRIRVYSTDTTDKGHYTDTL EEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEE NFTITPLA EEEEEECC >Mature Secondary Structure MNIKNKSLFIGLLLLFLQPTTAVANKWAGIYFYPLASKYSNCKMTLSEDNHLTVSFDVTL CCCCCHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCCCEEEECCCCEEEEEEEEEE ADHLFDISNSDHLQRWQELTRSQQHIMLAQNKALLYLYFYRADGSIDFSLQSGEVQDMSL EEEEEECCCCHHHHHHHHHHCCCCEEEEECCCEEEEEEEEEECCEEEEEEECCCEEEEEE NGVPAQHISNYIREAIFVSTPAFSNQSYHVSFSLAVSTLKHIRMGATIGGVLHSEGQQYS CCCCHHHHHHHHHHHEEEECCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCHHHCCCCEEE VRSPNGVAFNQSGNQCEFFDPTTEIAPAHALYIEPKFRLGSAIWQLKSLDLDHLLDSTAD ECCCCCEEECCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHCCCC NHGLHAPLVNAPANRFCIHYSSVGIQNRRYMISASNLNGLAESSRYFQLKDNQGEHIINY CCCCCCCEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEE KVTLKNHEDSEADFSLPKEKKFVQLKSDTSSGGEAQMCWSPRIRVYSTDTTDKGHYTDTL EEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEE NFTITPLA EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA