| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51594588
Identifier: 51594588
GI number: 51594588
Start: 275942
End: 276460
Strand: Reverse
Name: 51594588
Synonym: YPTB0233
Alternate gene names: NA
Gene position: 276460-275942 (Counterclockwise)
Preceding gene: 51594589
Following gene: 51594587
Centisome position: 5.83
GC content: 49.33
Gene sequence:
>519_bases ATGAATACCATAAAAATGGCCATCACATTGCTATTGCTCTCATGGCACACCTGCTGGGCCGCAACGCCATTGGGGGATAT CGACGTCAAATTAGAGGTAACAGCCCAACCCAGAATCGAAATCGAAAAACCGCATGGTGGCTGGTACGACAATATCAAGC TGCACAATAGCCCGGAGAACCATGCCGTTTATGAGGTAGAAGTCCCGGTAGCCGTCAAACTCCGGCGGCAAGAGGGGTAT CAAATCTCAATTAAAAACCCGCTAATACTCACCCGCCAATCAGATGCTTTCAGCGCAATAGAACAGACATTCTCACCGGC GGAAGTGCGTTGGGGAAATAACCGCACCAATTTACGTTTACTGTCAGCGGTACCGGAGTCCTTTAGCGTACCTCCACAGG CAACCCGCCACACCACCACCGATTATGTCTTACATATATCCGCAAAAGCCCCCGCAGGGGACAATACTGCAGGGAAATAT CACGGGCAACTGACATTGGTATTCGAAGTTAATAGTTAA
Upstream 100 bases:
>100_bases GAGGATCAGGCGGTTAGCCTACAGTGCCCTTCGGGCTAGCCTCTTGGTAATAAGCTATCAACAAATTTATCAGCATCAAT AAGAAGGACAAACCAGAAAC
Downstream 100 bases:
>100_bases TAGTTAATAGTTAATTGTTAATTGTTAATTGTTAATTGTTAATTGTTAATTGTTAATTGTTAATTGTTAATTGTTAATTG TTAATCGTTAATCGTTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MNTIKMAITLLLLSWHTCWAATPLGDIDVKLEVTAQPRIEIEKPHGGWYDNIKLHNSPENHAVYEVEVPVAVKLRRQEGY QISIKNPLILTRQSDAFSAIEQTFSPAEVRWGNNRTNLRLLSAVPESFSVPPQATRHTTTDYVLHISAKAPAGDNTAGKY HGQLTLVFEVNS
Sequences:
>Translated_172_residues MNTIKMAITLLLLSWHTCWAATPLGDIDVKLEVTAQPRIEIEKPHGGWYDNIKLHNSPENHAVYEVEVPVAVKLRRQEGY QISIKNPLILTRQSDAFSAIEQTFSPAEVRWGNNRTNLRLLSAVPESFSVPPQATRHTTTDYVLHISAKAPAGDNTAGKY HGQLTLVFEVNS >Mature_172_residues MNTIKMAITLLLLSWHTCWAATPLGDIDVKLEVTAQPRIEIEKPHGGWYDNIKLHNSPENHAVYEVEVPVAVKLRRQEGY QISIKNPLILTRQSDAFSAIEQTFSPAEVRWGNNRTNLRLLSAVPESFSVPPQATRHTTTDYVLHISAKAPAGDNTAGKY HGQLTLVFEVNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19225; Mature: 19225
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIKMAITLLLLSWHTCWAATPLGDIDVKLEVTAQPRIEIEKPHGGWYDNIKLHNSPEN CCHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEECCCCC HAVYEVEVPVAVKLRRQEGYQISIKNPLILTRQSDAFSAIEQTFSPAEVRWGNNRTNLRL CEEEEEECCEEEEEECCCCCEEEECCCEEEEECCHHHHHHHHCCCCCEEEECCCCCCEEE LSAVPESFSVPPQATRHTTTDYVLHISAKAPAGDNTAGKYHGQLTLVFEVNS EEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEECCEEEEEEEECC >Mature Secondary Structure MNTIKMAITLLLLSWHTCWAATPLGDIDVKLEVTAQPRIEIEKPHGGWYDNIKLHNSPEN CCHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEECCCCC HAVYEVEVPVAVKLRRQEGYQISIKNPLILTRQSDAFSAIEQTFSPAEVRWGNNRTNLRL CEEEEEECCEEEEEECCCCCEEEECCCEEEEECCHHHHHHHHCCCCCEEEECCCCCCEEE LSAVPESFSVPPQATRHTTTDYVLHISAKAPAGDNTAGKYHGQLTLVFEVNS EEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEECCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA