| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is 50843770
Identifier: 50843770
GI number: 50843770
Start: 2542812
End: 2543645
Strand: Direct
Name: 50843770
Synonym: PPA2335
Alternate gene names: NA
Gene position: 2542812-2543645 (Clockwise)
Preceding gene: 50843769
Following gene: 50843772
Centisome position: 99.32
GC content: 60.79
Gene sequence:
>834_bases GTGACGAAAAATCCCGCCTCGGGTGGGGTCACAACACTTGAGTGCCTCGCCCCTCACCGTGGCGGGATTTTTCGCACCTC ATCCCTTGTCACTGGACTCGCGAAGCAGCATGAGAGGCAGCACTATGGGGGTGTGGACGTCATTGATCTCACTACAGCCG GTTTCGACGAGTGGGTCTGTGTCGAAAATCACCGGCCGAGCGATCTCCCCGCTGGTTCCTGGCTTCCGGCGATTCAGCTC ATCGCTCCCGAAACCCTCATCCGCCGTGTCAACCATACCCACGAGGCTCTCCTGACCCAGCGCCATGAGGGAAAGGCGGG CCATGGTCACGAGGTCCCTGCCGCAGATGGCCCGGTTGCCTATCGTGTCGCACTGTCGGCAACCCAACTGGGAATTGTCG CCAGGTTGGTGGTTCCGGTCGTCGCAGCCCGGACCCTCGGCAACGATGTTGATTTCCCCAGGCTCGCGGACCTCTGGTTC CGTGATGTGCCTCTTGCTCCGGTTCCCGTGTCGGTAGCTTGGCAACCGGGACCAGCGAAAATCACCGGTTCAGCGGTTGA AGAGATCACTCGTGCCTTCATCGCCGCCGGGTTGAGCAAAATTGTCGCCTGGGACAACCTAGCCTCAGCAGTGAGCACTT CGGTCATCATGGTGACTCGCTGTCGCCCAGATTTACGCCAGGCAGCCATCGACGTCGCCACAGAGATATTGGCTATGGTC GACCCACGCCCCGGTATCACTGCCGGACCGGGCTTTCACCGCCGCAGCTGTTGCCTCTATTACCAGGTCAGTGGCTCTCG CATAGCTTGCTGTGGGGACTGCGTGCTGGTCTGA
Upstream 100 bases:
>100_bases GATCGTCTGTTACCCAGGTCCCTGGTTCCCGGTATCCCGGGCCGTTCGTGACGTATCCGGGATCTCTAAACCCTGAACAC AATCTGGGCGCCGGATCCTT
Downstream 100 bases:
>100_bases ACCACGGTCGCCGGGGCATCGTAATCATGGCGGGCCAAACTCATCGGCCATCGCAATCGTCCAACATCAGCTGGAACTAA CCCGTTGCCGCGCAACCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTKNPASGGVTTLECLAPHRGGIFRTSSLVTGLAKQHERQHYGGVDVIDLTTAGFDEWVCVENHRPSDLPAGSWLPAIQL IAPETLIRRVNHTHEALLTQRHEGKAGHGHEVPAADGPVAYRVALSATQLGIVARLVVPVVAARTLGNDVDFPRLADLWF RDVPLAPVPVSVAWQPGPAKITGSAVEEITRAFIAAGLSKIVAWDNLASAVSTSVIMVTRCRPDLRQAAIDVATEILAMV DPRPGITAGPGFHRRSCCLYYQVSGSRIACCGDCVLV
Sequences:
>Translated_277_residues MTKNPASGGVTTLECLAPHRGGIFRTSSLVTGLAKQHERQHYGGVDVIDLTTAGFDEWVCVENHRPSDLPAGSWLPAIQL IAPETLIRRVNHTHEALLTQRHEGKAGHGHEVPAADGPVAYRVALSATQLGIVARLVVPVVAARTLGNDVDFPRLADLWF RDVPLAPVPVSVAWQPGPAKITGSAVEEITRAFIAAGLSKIVAWDNLASAVSTSVIMVTRCRPDLRQAAIDVATEILAMV DPRPGITAGPGFHRRSCCLYYQVSGSRIACCGDCVLV >Mature_276_residues TKNPASGGVTTLECLAPHRGGIFRTSSLVTGLAKQHERQHYGGVDVIDLTTAGFDEWVCVENHRPSDLPAGSWLPAIQLI APETLIRRVNHTHEALLTQRHEGKAGHGHEVPAADGPVAYRVALSATQLGIVARLVVPVVAARTLGNDVDFPRLADLWFR DVPLAPVPVSVAWQPGPAKITGSAVEEITRAFIAAGLSKIVAWDNLASAVSTSVIMVTRCRPDLRQAAIDVATEILAMVD PRPGITAGPGFHRRSCCLYYQVSGSRIACCGDCVLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29554; Mature: 29423
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNPASGGVTTLECLAPHRGGIFRTSSLVTGLAKQHERQHYGGVDVIDLTTAGFDEWVC CCCCCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEE VENHRPSDLPAGSWLPAIQLIAPETLIRRVNHTHEALLTQRHEGKAGHGHEVPAADGPVA ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCEE YRVALSATQLGIVARLVVPVVAARTLGNDVDFPRLADLWFRDVPLAPVPVSVAWQPGPAK EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCC ITGSAVEEITRAFIAAGLSKIVAWDNLASAVSTSVIMVTRCRPDLRQAAIDVATEILAMV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHC DPRPGITAGPGFHRRSCCLYYQVSGSRIACCGDCVLV CCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCEEEC >Mature Secondary Structure TKNPASGGVTTLECLAPHRGGIFRTSSLVTGLAKQHERQHYGGVDVIDLTTAGFDEWVC CCCCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEE VENHRPSDLPAGSWLPAIQLIAPETLIRRVNHTHEALLTQRHEGKAGHGHEVPAADGPVA ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCEE YRVALSATQLGIVARLVVPVVAARTLGNDVDFPRLADLWFRDVPLAPVPVSVAWQPGPAK EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCC ITGSAVEEITRAFIAAGLSKIVAWDNLASAVSTSVIMVTRCRPDLRQAAIDVATEILAMV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHC DPRPGITAGPGFHRRSCCLYYQVSGSRIACCGDCVLV CCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA