| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843739
Identifier: 50843739
GI number: 50843739
Start: 2498211
End: 2500352
Strand: Direct
Name: 50843739
Synonym: PPA2302
Alternate gene names: NA
Gene position: 2498211-2500352 (Clockwise)
Preceding gene: 50843738
Following gene: 50843740
Centisome position: 97.58
GC content: 59.24
Gene sequence:
>2142_bases ATGACAGACGTGCCTTCTCCTTCCCGCCTTCGCCCAGCCGCCTGGCTACTAGGCCTGTTGATGGTTTTGGCGACCGTTGT GACGGGATCATCCCCTGCCCAGGCGCGCACCGCTTCCGGGTTAGTCAAGGTGGCGATTACCTCCGTCACGCCACCGACGG GTGATCCCAAAACTCCCATCACCATTAAAGGGACGGTCACGAACACCTCCTCGGTGTCCATGACGTGGGTACAGACGTCT TTTTGGCGTTCCCAGGACGAGATCAACGACACTCGGGACCTCTCTGACCTCCTCGCTTCCCCGGCTACCGTGCCAGTGGG GATGCGCTGGTTCCGCGAGCCGAAAGAGGCGTCAATTTTTAACATCACGGACCCCGAGGCCAACCAGACCTTTAAGCCAG GAGACACCGGGTCGTTCACCGTCACCGGTACACCCGCTCAGATGGGTCTGACGACGCCAAATGCTGTCTATGCAGTCGGG GTTCATGTACAGGCATCCCCGGGAAATCAACCGCGGAGAACCGTCGGACGAGCACGGGTACTCACGGTGCTCTCGGACGC TCACACCAGCGCGAATCTGGCCCCCGTTATCGTGCTGTCTGCCCCACCGTCGCGACGCATTGACGGTACCTTCACCGACG AATCCCTATCCGATGACATCACCCGCCGGTTGAAACCCCTCGCCGAGGCAGCACATACCCGCAATGCCACCGTGCTCGTT GATCCGAGTCTTATCGACGAAGTTCGTGCCATGGCGTCGGGTTATCTGGTAGCTGGCAAGGGCTCACACACTGTCGCCGG AACTGGCCAAGAGCAAGCCAAGGAGTGGCTCAATCTCGTCGAGCCTCTCTTATCGTCAGGCCGGGCGTATCGCCTGCCCT ACGGAAATGCTGACGTCATCGGGGCCGCCCGGCAGGGACGCTCCAGTCTTTTACTGACGGTCAAGCACGCCGTCGACCCT TCCAACCCCGCGGCGCATTTGCCCTTGGCTATCATCGATCCCGCCGCTGAACTCGACAATTCGTCGTTCAAAACCTTGGC TAAAGAGCTCTCCCCCTCCGTCATACTGACTTGCGCAGCATCAGTTCGTAAGGGGGTTCGCGAGGACTTTGGGGTGAAGA TCGTCGGGTTGGCCGACACGGTCCGGACCAGCGGCCATCCCCAATCAAACAGTGATTCTCAGCGACGCGGAATGCTGCTG TCCCAAGCCCTCCTCATGACTCGTGAGTCGATCCCTGCTGTCACCCTCGTGACCACCGTGAACGACGTCCAGGCCACTGC TCCCGTCAGCTGGCTCCATCTGCAGAACCTGTCGACAATTCTCAACGGGGCTAAACCGGGGCTACACCTGCCGGAAAGTC ATGCCGGAAACACGATCCTCAAAGATTCGTGGTGGCAAATCCAGCACGACGTGGGCGTTGATGCTGACGGCTGGTCAGAT TTGGTCGGGGCCTCGCCAGAGACGGCTTCTTTGACCTCGGCGAAATTTGTCAGCCGGACGCTGTCGGCGTCACTCAAGGA TCGGGAGGCGTGGGCTACCGACGTTATGCGCCCGGCGTCGGAGGTCATTGCCGGTAACGGCTTGGTCCTGCACTCGGCTT CCCATTTTGTGATGTCGTCGTCACGTAACGAGTTCCCGCTCACGATCACGAACTCGCTAGCGCAGACGGTTCGTGTCAAG GTCGTAGTCACTTCAGAAAACCCGCAACGCATTGACATCCCGGACACCCAGGTTGTTGCGATACAGCCCAAAGAGACGCA AACCATCAAGTTTGCTCCGAAAGCGAGTTCAAACGGCGTCGTTGAGATGCAGGCTCACCTGTCGACTCCGTCGGGACGGC TCCTGGGTTCTCAGTCAACTTTCGTCGTCAAAGCTACCCAAATGGATGATGTGGGCTGGATCATCATCGTCGTGTCGGCA TTGGTGCTCATCATCGCGACGGTGCTGAGAATCCGACAAGTGACGGCAAATTCCCAGCGCGACACCGAGACCGCAGCCCG AGATGCTAAGCAACCTGCAACGAAGCTTGATGACATTTCTGACAGCACGTCAGCCAACCCAGCACAACAGGATCAGGAAG CAGCCTCGAGTGACGATTCTGCACGGAGCTCTCACACCGACACTGGCGACCTCACCGCGTGA
Upstream 100 bases:
>100_bases TACTCCCGACGAGGCGAAAAACGCACTGCTGGCCTGGTGGGCCACGCAGGATCGCTAAACCTTTCTGATGGTCACAGCTG AAGCAGGTCAGCCAACTACC
Downstream 100 bases:
>100_bases CAATCCCAGAGTTCCGGGCCCGGATCGGTATCGTTGAGGATGCACAGTCGGATCGATCGGGTAGGAGGTGGCAGTGTCTT TCGAAGACCCCGCCGACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 713; Mature: 712
Protein sequence:
>713_residues MTDVPSPSRLRPAAWLLGLLMVLATVVTGSSPAQARTASGLVKVAITSVTPPTGDPKTPITIKGTVTNTSSVSMTWVQTS FWRSQDEINDTRDLSDLLASPATVPVGMRWFREPKEASIFNITDPEANQTFKPGDTGSFTVTGTPAQMGLTTPNAVYAVG VHVQASPGNQPRRTVGRARVLTVLSDAHTSANLAPVIVLSAPPSRRIDGTFTDESLSDDITRRLKPLAEAAHTRNATVLV DPSLIDEVRAMASGYLVAGKGSHTVAGTGQEQAKEWLNLVEPLLSSGRAYRLPYGNADVIGAARQGRSSLLLTVKHAVDP SNPAAHLPLAIIDPAAELDNSSFKTLAKELSPSVILTCAASVRKGVREDFGVKIVGLADTVRTSGHPQSNSDSQRRGMLL SQALLMTRESIPAVTLVTTVNDVQATAPVSWLHLQNLSTILNGAKPGLHLPESHAGNTILKDSWWQIQHDVGVDADGWSD LVGASPETASLTSAKFVSRTLSASLKDREAWATDVMRPASEVIAGNGLVLHSASHFVMSSSRNEFPLTITNSLAQTVRVK VVVTSENPQRIDIPDTQVVAIQPKETQTIKFAPKASSNGVVEMQAHLSTPSGRLLGSQSTFVVKATQMDDVGWIIIVVSA LVLIIATVLRIRQVTANSQRDTETAARDAKQPATKLDDISDSTSANPAQQDQEAASSDDSARSSHTDTGDLTA
Sequences:
>Translated_713_residues MTDVPSPSRLRPAAWLLGLLMVLATVVTGSSPAQARTASGLVKVAITSVTPPTGDPKTPITIKGTVTNTSSVSMTWVQTS FWRSQDEINDTRDLSDLLASPATVPVGMRWFREPKEASIFNITDPEANQTFKPGDTGSFTVTGTPAQMGLTTPNAVYAVG VHVQASPGNQPRRTVGRARVLTVLSDAHTSANLAPVIVLSAPPSRRIDGTFTDESLSDDITRRLKPLAEAAHTRNATVLV DPSLIDEVRAMASGYLVAGKGSHTVAGTGQEQAKEWLNLVEPLLSSGRAYRLPYGNADVIGAARQGRSSLLLTVKHAVDP SNPAAHLPLAIIDPAAELDNSSFKTLAKELSPSVILTCAASVRKGVREDFGVKIVGLADTVRTSGHPQSNSDSQRRGMLL SQALLMTRESIPAVTLVTTVNDVQATAPVSWLHLQNLSTILNGAKPGLHLPESHAGNTILKDSWWQIQHDVGVDADGWSD LVGASPETASLTSAKFVSRTLSASLKDREAWATDVMRPASEVIAGNGLVLHSASHFVMSSSRNEFPLTITNSLAQTVRVK VVVTSENPQRIDIPDTQVVAIQPKETQTIKFAPKASSNGVVEMQAHLSTPSGRLLGSQSTFVVKATQMDDVGWIIIVVSA LVLIIATVLRIRQVTANSQRDTETAARDAKQPATKLDDISDSTSANPAQQDQEAASSDDSARSSHTDTGDLTA >Mature_712_residues TDVPSPSRLRPAAWLLGLLMVLATVVTGSSPAQARTASGLVKVAITSVTPPTGDPKTPITIKGTVTNTSSVSMTWVQTSF WRSQDEINDTRDLSDLLASPATVPVGMRWFREPKEASIFNITDPEANQTFKPGDTGSFTVTGTPAQMGLTTPNAVYAVGV HVQASPGNQPRRTVGRARVLTVLSDAHTSANLAPVIVLSAPPSRRIDGTFTDESLSDDITRRLKPLAEAAHTRNATVLVD PSLIDEVRAMASGYLVAGKGSHTVAGTGQEQAKEWLNLVEPLLSSGRAYRLPYGNADVIGAARQGRSSLLLTVKHAVDPS NPAAHLPLAIIDPAAELDNSSFKTLAKELSPSVILTCAASVRKGVREDFGVKIVGLADTVRTSGHPQSNSDSQRRGMLLS QALLMTRESIPAVTLVTTVNDVQATAPVSWLHLQNLSTILNGAKPGLHLPESHAGNTILKDSWWQIQHDVGVDADGWSDL VGASPETASLTSAKFVSRTLSASLKDREAWATDVMRPASEVIAGNGLVLHSASHFVMSSSRNEFPLTITNSLAQTVRVKV VVTSENPQRIDIPDTQVVAIQPKETQTIKFAPKASSNGVVEMQAHLSTPSGRLLGSQSTFVVKATQMDDVGWIIIVVSAL VLIIATVLRIRQVTANSQRDTETAARDAKQPATKLDDISDSTSANPAQQDQEAASSDDSARSSHTDTGDLTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75664; Mature: 75533
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVPSPSRLRPAAWLLGLLMVLATVVTGSSPAQARTASGLVKVAITSVTPPTGDPKTPI CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEEEECCCCCCCCCCCE TIKGTVTNTSSVSMTWVQTSFWRSQDEINDTRDLSDLLASPATVPVGMRWFREPKEASIF EEEEEEECCCCEEEEEEEHHHHCCHHHCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEE NITDPEANQTFKPGDTGSFTVTGTPAQMGLTTPNAVYAVGVHVQASPGNQPRRTVGRARV ECCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHH LTVLSDAHTSANLAPVIVLSAPPSRRIDGTFTDESLSDDITRRLKPLAEAAHTRNATVLV HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE DPSLIDEVRAMASGYLVAGKGSHTVAGTGQEQAKEWLNLVEPLLSSGRAYRLPYGNADVI CHHHHHHHHHHHCCEEEECCCCCEECCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEE GAARQGRSSLLLTVKHAVDPSNPAAHLPLAIIDPAAELDNSSFKTLAKELSPSVILTCAA ECCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCHHHCCCHHHHHHHHHCCCCEEEEEHH SVRKGVREDFGVKIVGLADTVRTSGHPQSNSDSQRRGMLLSQALLMTRESIPAVTLVTTV HHHHHHHHHHCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE NDVQATAPVSWLHLQNLSTILNGAKPGLHLPESHAGNTILKDSWWQIQHDVGVDADGWSD CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCHH LVGASPETASLTSAKFVSRTLSASLKDREAWATDVMRPASEVIAGNGLVLHSASHFVMSS HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCHHEEEC SRNEFPLTITNSLAQTVRVKVVVTSENPQRIDIPDTQVVAIQPKETQTIKFAPKASSNGV CCCCCCEEEHHHHCCEEEEEEEEECCCCCEECCCCCEEEEECCCCCCEEEECCCCCCCCE VEMQAHLSTPSGRLLGSQSTFVVKATQMDDVGWIIIVVSALVLIIATVLRIRQVTANSQR EEEEEECCCCCCCEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DTETAARDAKQPATKLDDISDSTSANPAQQDQEAASSDDSARSSHTDTGDLTA CHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDVPSPSRLRPAAWLLGLLMVLATVVTGSSPAQARTASGLVKVAITSVTPPTGDPKTPI CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEEEECCCCCCCCCCCE TIKGTVTNTSSVSMTWVQTSFWRSQDEINDTRDLSDLLASPATVPVGMRWFREPKEASIF EEEEEEECCCCEEEEEEEHHHHCCHHHCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEE NITDPEANQTFKPGDTGSFTVTGTPAQMGLTTPNAVYAVGVHVQASPGNQPRRTVGRARV ECCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHH LTVLSDAHTSANLAPVIVLSAPPSRRIDGTFTDESLSDDITRRLKPLAEAAHTRNATVLV HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE DPSLIDEVRAMASGYLVAGKGSHTVAGTGQEQAKEWLNLVEPLLSSGRAYRLPYGNADVI CHHHHHHHHHHHCCEEEECCCCCEECCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEE GAARQGRSSLLLTVKHAVDPSNPAAHLPLAIIDPAAELDNSSFKTLAKELSPSVILTCAA ECCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCHHHCCCHHHHHHHHHCCCCEEEEEHH SVRKGVREDFGVKIVGLADTVRTSGHPQSNSDSQRRGMLLSQALLMTRESIPAVTLVTTV HHHHHHHHHHCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE NDVQATAPVSWLHLQNLSTILNGAKPGLHLPESHAGNTILKDSWWQIQHDVGVDADGWSD CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCHH LVGASPETASLTSAKFVSRTLSASLKDREAWATDVMRPASEVIAGNGLVLHSASHFVMSS HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCHHEEEC SRNEFPLTITNSLAQTVRVKVVVTSENPQRIDIPDTQVVAIQPKETQTIKFAPKASSNGV CCCCCCEEEHHHHCCEEEEEEEEECCCCCEECCCCCEEEEECCCCCCEEEECCCCCCCCE VEMQAHLSTPSGRLLGSQSTFVVKATQMDDVGWIIIVVSALVLIIATVLRIRQVTANSQR EEEEEECCCCCCCEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DTETAARDAKQPATKLDDISDSTSANPAQQDQEAASSDDSARSSHTDTGDLTA CHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA