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The map label for this gene is yabE [H]

Identifier: 50843674

GI number: 50843674

Start: 2422254

End: 2423447

Strand: Reverse

Name: yabE [H]

Synonym: PPA2239

Alternate gene names: 50843674

Gene position: 2423447-2422254 (Counterclockwise)

Preceding gene: 50843675

Following gene: 50843670

Centisome position: 94.66

GC content: 58.46

Gene sequence:

>1194_bases
ATGTCGAAAGTTGTAGCTTCCGCGATTGCCGGGGCCCTCAGCCTTACCTCGGCTGGCGGCCTGACGATGGTCCAGGCACT
TGATCGAGATACCGTGACCTTCTCCGTGGACGGAGTCTCCCAGCAGGCCAAGGTTAAGCCAGGCACGGTCAAGCAAGCTC
TCGCCCAGCAGGGGATTACAGTTGGCCCGCACGACGATGTGCAACCCTCGCTGGATTCTGAGATTCACGATGGCCAGGTC
ATCACCGTTAACTACGGTCGCCGTGTCGTGGTCACTATTGACGGTAAGAAGGTGGTCCGTTGGACCACGGCTAAGAACGT
GGCCGAGGTTTTGGCTCAGCTGAACCAGTCAGATCCTGACAACCTCGTGTCGGTGTCGCGTTCACTGGATATTTCGCGTG
CCGGGCTGTCCTTCTCGATGCAGACGGCTAAGGATGTCACGGTCACCATCGGTGGCAAAACTCAGAAGATTACCGCGGTT
GGAACCGTTGCTGACGCCCTCAAGGCGGCGAAGGTCGAGGTTGATTCGAGCGATGCCGTTAACCCGGGTCTGGGTACGCC
ACTGTCCGATGGCATGAAGATTACCCTGACGATGGTTGACCAGAAGTCTCAGAAGCGTCGTGTCGCCGTGCCCTTCTCCA
CCAAGAAGGTCGAGGACTCCAGCCTGCCCAAGGGCGAGATCAAGGTCATCACTAAGGGTGTCAACGGCATCAACGAGGAA
ACCTGGACCGTCGTCTTTAAGGACGGCAAGAAGGTGTCCGAGAAGAAGGTTTCCAGCAAGGTCGTCAACGCCCCTGTGAC
CCAGGTCGTCAAGGTTGGCACTAAGACTGCGTCGTCGAGTTCTCCTTCGACGCGTTCGTCCTCCGCCTCGCACCGTTCGA
CAGCATCTCAGTCGTCCGATCCGGTGACCAGTGGTACTACCTGTTTGGCATCTACCTACGGTGAGGGTGACGGTACTGCT
GGTGGCCCTACTGCTTCCGGTGAGACCTTCGACCCGTCAGCCTTCACTGCTGCGTCGAAGACCCTTCCGCTTGGATCGAC
TATCCGCGTCACGAACGTCAGCAATGGTCGTACTGTGACTGTGCGCATTAACGATCGCGGTCCTTACGTCGGCGGACGGT
GCCTTGATCTTTCAACGGCCGCGATGAACGCTATCGCTCCCGGACAGGGTCTGGTGACCGTCCGCTACAGCTGA

Upstream 100 bases:

>100_bases
GTTGCCCGTGCCTTCCACCGGAGGTACGTTGGCGCGTGCCAGTGTGGCTGACGCCGATCTCCGTACCGGGCCCTCGAGCC
CCCGATACTGAAATGGTCGA

Downstream 100 bases:

>100_bases
TTACAGCCTGTTTGACGGCGCTTGGTGTGCTGCTGCGGCAGCCCTGAGTCGTTCGCACCAAAGAGACGCCTCATTCGATG
GGAAAGCACACGTCGCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSKVVASAIAGALSLTSAGGLTMVQALDRDTVTFSVDGVSQQAKVKPGTVKQALAQQGITVGPHDDVQPSLDSEIHDGQV
ITVNYGRRVVVTIDGKKVVRWTTAKNVAEVLAQLNQSDPDNLVSVSRSLDISRAGLSFSMQTAKDVTVTIGGKTQKITAV
GTVADALKAAKVEVDSSDAVNPGLGTPLSDGMKITLTMVDQKSQKRRVAVPFSTKKVEDSSLPKGEIKVITKGVNGINEE
TWTVVFKDGKKVSEKKVSSKVVNAPVTQVVKVGTKTASSSSPSTRSSSASHRSTASQSSDPVTSGTTCLASTYGEGDGTA
GGPTASGETFDPSAFTAASKTLPLGSTIRVTNVSNGRTVTVRINDRGPYVGGRCLDLSTAAMNAIAPGQGLVTVRYS

Sequences:

>Translated_397_residues
MSKVVASAIAGALSLTSAGGLTMVQALDRDTVTFSVDGVSQQAKVKPGTVKQALAQQGITVGPHDDVQPSLDSEIHDGQV
ITVNYGRRVVVTIDGKKVVRWTTAKNVAEVLAQLNQSDPDNLVSVSRSLDISRAGLSFSMQTAKDVTVTIGGKTQKITAV
GTVADALKAAKVEVDSSDAVNPGLGTPLSDGMKITLTMVDQKSQKRRVAVPFSTKKVEDSSLPKGEIKVITKGVNGINEE
TWTVVFKDGKKVSEKKVSSKVVNAPVTQVVKVGTKTASSSSPSTRSSSASHRSTASQSSDPVTSGTTCLASTYGEGDGTA
GGPTASGETFDPSAFTAASKTLPLGSTIRVTNVSNGRTVTVRINDRGPYVGGRCLDLSTAAMNAIAPGQGLVTVRYS
>Mature_396_residues
SKVVASAIAGALSLTSAGGLTMVQALDRDTVTFSVDGVSQQAKVKPGTVKQALAQQGITVGPHDDVQPSLDSEIHDGQVI
TVNYGRRVVVTIDGKKVVRWTTAKNVAEVLAQLNQSDPDNLVSVSRSLDISRAGLSFSMQTAKDVTVTIGGKTQKITAVG
TVADALKAAKVEVDSSDAVNPGLGTPLSDGMKITLTMVDQKSQKRRVAVPFSTKKVEDSSLPKGEIKVITKGVNGINEET
WTVVFKDGKKVSEKKVSSKVVNAPVTQVVKVGTKTASSSSPSTRSSSASHRSTASQSSDPVTSGTTCLASTYGEGDGTAG
GPTASGETFDPSAFTAASKTLPLGSTIRVTNVSNGRTVTVRINDRGPYVGGRCLDLSTAAMNAIAPGQGLVTVRYS

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=62, Percent_Identity=56.4516129032258, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 41026; Mature: 40894

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVVASAIAGALSLTSAGGLTMVQALDRDTVTFSVDGVSQQAKVKPGTVKQALAQQGIT
CCHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCE
VGPHDDVQPSLDSEIHDGQVITVNYGRRVVVTIDGKKVVRWTTAKNVAEVLAQLNQSDPD
ECCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEEEECHHHHHHHHHHHCCCCCH
NLVSVSRSLDISRAGLSFSMQTAKDVTVTIGGKTQKITAVGTVADALKAAKVEVDSSDAV
HHHHHHHCCCEECCCCEEEEECCCEEEEEECCCCEEEEEEHHHHHHHHHHEEEECCCCCC
NPGLGTPLSDGMKITLTMVDQKSQKRRVAVPFSTKKVEDSSLPKGEIKVITKGVNGINEE
CCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
TWTVVFKDGKKVSEKKVSSKVVNAPVTQVVKVGTKTASSSSPSTRSSSASHRSTASQSSD
EEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCC
PVTSGTTCLASTYGEGDGTAGGPTASGETFDPSAFTAASKTLPLGSTIRVTNVSNGRTVT
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCEEEE
VRINDRGPYVGGRCLDLSTAAMNAIAPGQGLVTVRYS
EEECCCCCCCCCEEEECHHHHHHHCCCCCCEEEEEEC
>Mature Secondary Structure 
SKVVASAIAGALSLTSAGGLTMVQALDRDTVTFSVDGVSQQAKVKPGTVKQALAQQGIT
CHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCE
VGPHDDVQPSLDSEIHDGQVITVNYGRRVVVTIDGKKVVRWTTAKNVAEVLAQLNQSDPD
ECCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEEEECHHHHHHHHHHHCCCCCH
NLVSVSRSLDISRAGLSFSMQTAKDVTVTIGGKTQKITAVGTVADALKAAKVEVDSSDAV
HHHHHHHCCCEECCCCEEEEECCCEEEEEECCCCEEEEEEHHHHHHHHHHEEEECCCCCC
NPGLGTPLSDGMKITLTMVDQKSQKRRVAVPFSTKKVEDSSLPKGEIKVITKGVNGINEE
CCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
TWTVVFKDGKKVSEKKVSSKVVNAPVTQVVKVGTKTASSSSPSTRSSSASHRSTASQSSD
EEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCC
PVTSGTTCLASTYGEGDGTAGGPTASGETFDPSAFTAASKTLPLGSTIRVTNVSNGRTVT
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCEEEE
VRINDRGPYVGGRCLDLSTAAMNAIAPGQGLVTVRYS
EEECCCCCCCCCEEEECHHHHHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]