Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50843653

Identifier: 50843653

GI number: 50843653

Start: 2402789

End: 2404114

Strand: Reverse

Name: 50843653

Synonym: PPA2218

Alternate gene names: NA

Gene position: 2404114-2402789 (Counterclockwise)

Preceding gene: 50843654

Following gene: 50843652

Centisome position: 93.9

GC content: 61.31

Gene sequence:

>1326_bases
GTGAACGACGACCCGTACTACCGGGAGCTGCCCGACGGCACGATTAAGCAGGTTAACCCGTTTACTGGAACGAAAGTGTG
GACGGTTCCGGGCCGCGGTGCGCGGCCACTGGGTAAGCCAGCCGAGCAAACTCGGGAATTGGCCGACCATGACCGTCGTG
CCGCGTGCGTGTTCTGTCCCGATAATTATTTGTCTACGCCGCCGGAGAAGACCCGGCTGGTGAAGCGGGCGGGCGGCCTG
GTGCGCGGCCATGATCTCATCCGTTGCGTTCCGGCTGACCGACTCGACGCGACGGTGCCGGAGTTTCGACGCGTCCCCAA
TCTTTTCGAGATCCTGTCGTGGCGGTATTGGCAGCTCAACTGGGGGATGAGCTTGCCTCGGGCAGCGCGGGACTGGCAGG
AGGAATACCTGTCTAACCCGTCAGGGGAGGCTCACGTGAGGTCGGTCCTTAACGCCAAGTTCAAGGCGGTGGGGTCAGAC
CGGCGCGCCGAGGACCTCGGTCCCCAAGAACTACGCGAGGCTTCCGCAGCCTTCTTTGCCGGCGGACATGACGTCATCGT
CGCTCGTCGCCATTACACCGATGAGGGCACGACAACCGCCGACATTGCTGGATCGGCGAGTCTTTCCGTCAACGAGCATC
GGGCGTTCATGGCGCTGACCGTCGATTCAATGGCTCAGCTGCATCGTCACAACGAACATGTGCGATATGTGGTGGTTTTC
CAGAACTGGCTTAAGCCGGCTGGGGCTTCTTTCGATCACTTGCATAAGCAGGTGGTGGCAATTGACGAGGTCGGTGCCGA
TAATGAGTCGGTGCTGCCGAAGGCTGTCCTCGACCCGGGCATTTTTAATCGGTGGGGACCCGACTTTGCGGTAGAGCATG
GTCTAGTGCTGGCCTGCAATGACGGCGCCGTCATGACGGTTGGATTCGGGCATCGCTACCCGTCGGTGGAGGTGTGGTCG
ACGAGCCGGGTTGATCAGCCCTGGCGGGTTGACGATGAGGGAATCGACGCCGTTTCAGATCTCCTGCATGCCGCGCACGT
AGCCGTCAGCGACGATGTGCCTGCCAATGAGGAGTGGCATTACCGCCCGATGGGTACGGGAGTGCCGGTACCGTGGCGGA
TCATCCTTAAGCTGAGAACCTCGACCCTGGCCGGATTTGAGGGCGGGACGAAGATTTACGTCAATACCATCTCACCGACG
ACGTTGGCCGCCATGCTGTTGCCGAAGTTGTTTGAGGCGCGGGCAGCTGGGCGAATCGCGGCGATGAACTTGGGGGATGA
ATGCGAGATCCCCAGGGGAGTGCTAGCCGTGACCCGGGAGAGGTGA

Upstream 100 bases:

>100_bases
TCATGCTGTTGGAGAACCACCAGCAGGCTGATGGCTCGGTGCGCATACCCGAGGCACTGCGTCCTTATCTGGGTGGGCGT
GAGTTCATTGAGCCTGTGAA

Downstream 100 bases:

>100_bases
GAGGTAGGCGTAGTTTAGTGCCCGAGCTCATACTCGATTGTGCATGGATCACTAGCACTGCGCGCAGTGATCATGGGACC
CACATCGAGACCAGGTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MNDDPYYRELPDGTIKQVNPFTGTKVWTVPGRGARPLGKPAEQTRELADHDRRAACVFCPDNYLSTPPEKTRLVKRAGGL
VRGHDLIRCVPADRLDATVPEFRRVPNLFEILSWRYWQLNWGMSLPRAARDWQEEYLSNPSGEAHVRSVLNAKFKAVGSD
RRAEDLGPQELREASAAFFAGGHDVIVARRHYTDEGTTTADIAGSASLSVNEHRAFMALTVDSMAQLHRHNEHVRYVVVF
QNWLKPAGASFDHLHKQVVAIDEVGADNESVLPKAVLDPGIFNRWGPDFAVEHGLVLACNDGAVMTVGFGHRYPSVEVWS
TSRVDQPWRVDDEGIDAVSDLLHAAHVAVSDDVPANEEWHYRPMGTGVPVPWRIILKLRTSTLAGFEGGTKIYVNTISPT
TLAAMLLPKLFEARAAGRIAAMNLGDECEIPRGVLAVTRER

Sequences:

>Translated_441_residues
MNDDPYYRELPDGTIKQVNPFTGTKVWTVPGRGARPLGKPAEQTRELADHDRRAACVFCPDNYLSTPPEKTRLVKRAGGL
VRGHDLIRCVPADRLDATVPEFRRVPNLFEILSWRYWQLNWGMSLPRAARDWQEEYLSNPSGEAHVRSVLNAKFKAVGSD
RRAEDLGPQELREASAAFFAGGHDVIVARRHYTDEGTTTADIAGSASLSVNEHRAFMALTVDSMAQLHRHNEHVRYVVVF
QNWLKPAGASFDHLHKQVVAIDEVGADNESVLPKAVLDPGIFNRWGPDFAVEHGLVLACNDGAVMTVGFGHRYPSVEVWS
TSRVDQPWRVDDEGIDAVSDLLHAAHVAVSDDVPANEEWHYRPMGTGVPVPWRIILKLRTSTLAGFEGGTKIYVNTISPT
TLAAMLLPKLFEARAAGRIAAMNLGDECEIPRGVLAVTRER
>Mature_441_residues
MNDDPYYRELPDGTIKQVNPFTGTKVWTVPGRGARPLGKPAEQTRELADHDRRAACVFCPDNYLSTPPEKTRLVKRAGGL
VRGHDLIRCVPADRLDATVPEFRRVPNLFEILSWRYWQLNWGMSLPRAARDWQEEYLSNPSGEAHVRSVLNAKFKAVGSD
RRAEDLGPQELREASAAFFAGGHDVIVARRHYTDEGTTTADIAGSASLSVNEHRAFMALTVDSMAQLHRHNEHVRYVVVF
QNWLKPAGASFDHLHKQVVAIDEVGADNESVLPKAVLDPGIFNRWGPDFAVEHGLVLACNDGAVMTVGFGHRYPSVEVWS
TSRVDQPWRVDDEGIDAVSDLLHAAHVAVSDDVPANEEWHYRPMGTGVPVPWRIILKLRTSTLAGFEGGTKIYVNTISPT
TLAAMLLPKLFEARAAGRIAAMNLGDECEIPRGVLAVTRER

Specific function: Unknown

COG id: COG1085

COG function: function code C; Galactose-1-phosphate uridylyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48947; Mature: 48947

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDDPYYRELPDGTIKQVNPFTGTKVWTVPGRGARPLGKPAEQTRELADHDRRAACVFCP
CCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECC
DNYLSTPPEKTRLVKRAGGLVRGHDLIRCVPADRLDATVPEFRRVPNLFEILSWRYWQLN
CCCCCCCCHHHHHHHHHCCEEECCCEEEECCCCCCCCCCHHHHHCCHHHHHHCCEEEEEE
WGMSLPRAARDWQEEYLSNPSGEAHVRSVLNAKFKAVGSDRRAEDLGPQELREASAAFFA
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
GGHDVIVARRHYTDEGTTTADIAGSASLSVNEHRAFMALTVDSMAQLHRHNEHVRYVVVF
CCCEEEEEEEEECCCCCEEEECCCCCEEEECCCCEEEEEEHHHHHHHHHCCCCEEEEEEE
QNWLKPAGASFDHLHKQVVAIDEVGADNESVLPKAVLDPGIFNRWGPDFAVEHGLVLACN
EHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHCCEEEEEC
DGAVMTVGFGHRYPSVEVWSTSRVDQPWRVDDEGIDAVSDLLHAAHVAVSDDVPANEEWH
CCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCE
YRPMGTGVPVPWRIILKLRTSTLAGFEGGTKIYVNTISPTTLAAMLLPKLFEARAAGRIA
EEECCCCCCCCCEEEEEEHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEE
AMNLGDECEIPRGVLAVTRER
EECCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MNDDPYYRELPDGTIKQVNPFTGTKVWTVPGRGARPLGKPAEQTRELADHDRRAACVFCP
CCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECC
DNYLSTPPEKTRLVKRAGGLVRGHDLIRCVPADRLDATVPEFRRVPNLFEILSWRYWQLN
CCCCCCCCHHHHHHHHHCCEEECCCEEEECCCCCCCCCCHHHHHCCHHHHHHCCEEEEEE
WGMSLPRAARDWQEEYLSNPSGEAHVRSVLNAKFKAVGSDRRAEDLGPQELREASAAFFA
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
GGHDVIVARRHYTDEGTTTADIAGSASLSVNEHRAFMALTVDSMAQLHRHNEHVRYVVVF
CCCEEEEEEEEECCCCCEEEECCCCCEEEECCCCEEEEEEHHHHHHHHHCCCCEEEEEEE
QNWLKPAGASFDHLHKQVVAIDEVGADNESVLPKAVLDPGIFNRWGPDFAVEHGLVLACN
EHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHCCEEEEEC
DGAVMTVGFGHRYPSVEVWSTSRVDQPWRVDDEGIDAVSDLLHAAHVAVSDDVPANEEWH
CCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCE
YRPMGTGVPVPWRIILKLRTSTLAGFEGGTKIYVNTISPTTLAAMLLPKLFEARAAGRIA
EEECCCCCCCCCEEEEEEHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEE
AMNLGDECEIPRGVLAVTRER
EECCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA