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The map label for this gene is amaB [H]

Identifier: 50843604

GI number: 50843604

Start: 2347742

End: 2348938

Strand: Direct

Name: amaB [H]

Synonym: PPA2167

Alternate gene names: 50843604

Gene position: 2347742-2348938 (Clockwise)

Preceding gene: 50843603

Following gene: 50843605

Centisome position: 91.7

GC content: 64.41

Gene sequence:

>1197_bases
ATGACGACCTGGACTGCTGCCAGTCTGCTGGCTGAAATCGCCGCGATTGGACGCAACGAGGACGGCTCTTATTCGCGGTT
TTGCCTACGTCCCGAGGAGGTGGCGCTGCGGGAATGGTTCGTCGCAAAGGCCACCGAGTTGGGGCTGGCGATCGTCACGG
ACGCGAACGCTAACATCTGGGCGTGGTGGGGAACTCCGGGTCCCGACGCCGTCCTGACGGGGTCCCACCTGGATTCTGTG
CCCGGCGGTGGAGCCTACGACGGGCCTCTCGGCGTCGTCTCGTCATTGGTGGCTGTGGCGAAGATGCAAGAAGCCGGGAT
CATGCCGGCGAAACCTTTCGCAGTCGTCGCCATGGCTGACGAAGAGGGCGCCCGGTTCGGAATGCCCTGTTTGGGGTCGC
GGCTGGCGTCGGGCAAGCTCAGCAAAGCTGAGGCCCACACGCTCGTCGCTCGAGATGGGCAGTCCTTGCCGGACGCGTGG
CGAGAGGCCGGCTTGAACCCCGATCTCATGGGTCCCGACGACGTTCTGCTTGAGGCATCCTGCTTTGTTGAATTGCACGT
TGAGCAAGGGCGAGGTCTGGCGGATGTGGGACACCCGGTCGCAATTGCCACCGCGGTACGACCACATGGACGTTGGCGTG
CCGAGTTCACCGGCCAGGGAAACCACGCCGGAACGACCCTCATACCCGATCGTCATGACCCGGTCGTCCCGATGGCGCAG
ACCATACTGGCAGCCCGGGAGGCAGCAGAACGCGAGGGTTGCGTGACGACGGTCGGGCGGATCAACGTCGAGCCAGGTGG
TACCAACGTCATTGCCTCGGCCGCGACGATGTGGCTGGACTGCCGAGCCGAGGAATCACAGACCGTCACCAAAGTCGTCG
AGGACATCCAGCAGGCCTCAGAAACTGCCGCTGACAAGCAGGGGTGCCAGGTTGTCTGGACCCGCGAGTCGTGGACCGAT
CGCACCGCATTCGACCTGCGCGCGCGGATGCTACAGATCCTCGGCGAGGACATCCCCCAGCTATCCACCGGGGCTGGCCA
TGACGCCGCAACGTTAGCGACGACGATGCCTACCGGGATGCTCTTCGTCCGCAATCCCACCGGGGCTTCTCACTGCCCCG
CAGAATCAGCGAGTGACGCCGACTGCGAAGCCGGGGCCGAAGCGCTGCAAACCGTGCTAGAGGAGCTCGTCAAATGA

Upstream 100 bases:

>100_bases
CCATCGAGACGGCCACCGAGTTCAACCACGAGCACAACGACGCCCAAATCACCCTGCCCTACCTGGTAGATGACGCCCTT
ATTGACGGATTGGTGAAGTG

Downstream 100 bases:

>100_bases
GCACATGGTTTTTCCCGAGCGCCCTGGTAGAGGGGCGGATTGCGCACAACGTGCGCGTCCAAAGCCAGAACGGCGTCATC
ACTGCGGTGACGATAGGGGC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTTWTAASLLAEIAAIGRNEDGSYSRFCLRPEEVALREWFVAKATELGLAIVTDANANIWAWWGTPGPDAVLTGSHLDSV
PGGGAYDGPLGVVSSLVAVAKMQEAGIMPAKPFAVVAMADEEGARFGMPCLGSRLASGKLSKAEAHTLVARDGQSLPDAW
REAGLNPDLMGPDDVLLEASCFVELHVEQGRGLADVGHPVAIATAVRPHGRWRAEFTGQGNHAGTTLIPDRHDPVVPMAQ
TILAAREAAEREGCVTTVGRINVEPGGTNVIASAATMWLDCRAEESQTVTKVVEDIQQASETAADKQGCQVVWTRESWTD
RTAFDLRARMLQILGEDIPQLSTGAGHDAATLATTMPTGMLFVRNPTGASHCPAESASDADCEAGAEALQTVLEELVK

Sequences:

>Translated_398_residues
MTTWTAASLLAEIAAIGRNEDGSYSRFCLRPEEVALREWFVAKATELGLAIVTDANANIWAWWGTPGPDAVLTGSHLDSV
PGGGAYDGPLGVVSSLVAVAKMQEAGIMPAKPFAVVAMADEEGARFGMPCLGSRLASGKLSKAEAHTLVARDGQSLPDAW
REAGLNPDLMGPDDVLLEASCFVELHVEQGRGLADVGHPVAIATAVRPHGRWRAEFTGQGNHAGTTLIPDRHDPVVPMAQ
TILAAREAAEREGCVTTVGRINVEPGGTNVIASAATMWLDCRAEESQTVTKVVEDIQQASETAADKQGCQVVWTRESWTD
RTAFDLRARMLQILGEDIPQLSTGAGHDAATLATTMPTGMLFVRNPTGASHCPAESASDADCEAGAEALQTVLEELVK
>Mature_397_residues
TTWTAASLLAEIAAIGRNEDGSYSRFCLRPEEVALREWFVAKATELGLAIVTDANANIWAWWGTPGPDAVLTGSHLDSVP
GGGAYDGPLGVVSSLVAVAKMQEAGIMPAKPFAVVAMADEEGARFGMPCLGSRLASGKLSKAEAHTLVARDGQSLPDAWR
EAGLNPDLMGPDDVLLEASCFVELHVEQGRGLADVGHPVAIATAVRPHGRWRAEFTGQGNHAGTTLIPDRHDPVVPMAQT
ILAAREAAEREGCVTTVGRINVEPGGTNVIASAATMWLDCRAEESQTVTKVVEDIQQASETAADKQGCQVVWTRESWTDR
TAFDLRARMLQILGEDIPQLSTGAGHDAATLATTMPTGMLFVRNPTGASHCPAESASDADCEAGAEALQTVLEELVK

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=398, Percent_Identity=27.8894472361809, Blast_Score=160, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 42015; Mature: 41883

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTWTAASLLAEIAAIGRNEDGSYSRFCLRPEEVALREWFVAKATELGLAIVTDANANIW
CCCHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCEE
AWWGTPGPDAVLTGSHLDSVPGGGAYDGPLGVVSSLVAVAKMQEAGIMPAKPFAVVAMAD
EEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
EEGARFGMPCLGSRLASGKLSKAEAHTLVARDGQSLPDAWREAGLNPDLMGPDDVLLEAS
CCCCCCCCCHHHHHHHCCCCCHHHHHEEEECCCCCCCHHHHHCCCCCCCCCCCHHEEEEE
CFVELHVEQGRGLADVGHPVAIATAVRPHGRWRAEFTGQGNHAGTTLIPDRHDPVVPMAQ
EEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH
TILAAREAAEREGCVTTVGRINVEPGGTNVIASAATMWLDCRAEESQTVTKVVEDIQQAS
HHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHH
ETAADKQGCQVVWTRESWTDRTAFDLRARMLQILGEDIPQLSTGAGHDAATLATTMPTGM
HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCE
LFVRNPTGASHCPAESASDADCEAGAEALQTVLEELVK
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTWTAASLLAEIAAIGRNEDGSYSRFCLRPEEVALREWFVAKATELGLAIVTDANANIW
CCHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCEE
AWWGTPGPDAVLTGSHLDSVPGGGAYDGPLGVVSSLVAVAKMQEAGIMPAKPFAVVAMAD
EEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
EEGARFGMPCLGSRLASGKLSKAEAHTLVARDGQSLPDAWREAGLNPDLMGPDDVLLEAS
CCCCCCCCCHHHHHHHCCCCCHHHHHEEEECCCCCCCHHHHHCCCCCCCCCCCHHEEEEE
CFVELHVEQGRGLADVGHPVAIATAVRPHGRWRAEFTGQGNHAGTTLIPDRHDPVVPMAQ
EEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH
TILAAREAAEREGCVTTVGRINVEPGGTNVIASAATMWLDCRAEESQTVTKVVEDIQQAS
HHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHH
ETAADKQGCQVVWTRESWTDRTAFDLRARMLQILGEDIPQLSTGAGHDAATLATTMPTGM
HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCE
LFVRNPTGASHCPAESASDADCEAGAEALQTVLEELVK
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]