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The map label for this gene is oppA [H]

Identifier: 50843590

GI number: 50843590

Start: 2335970

End: 2337637

Strand: Direct

Name: oppA [H]

Synonym: PPA2152

Alternate gene names: 50843590

Gene position: 2335970-2337637 (Clockwise)

Preceding gene: 50843589

Following gene: 50843591

Centisome position: 91.24

GC content: 59.47

Gene sequence:

>1668_bases
ATGCGTCACATGAGGCCACTCATTGCGCTGTCCCTCGCAGGTTTGATGACGCTGTCAGCCTGCGGCGAGGATGTCGCGGC
CAAGGATGACTCGGCTGCCGGATCGTCAGCCGCCGGCGGCAGCAATAACAGCGCCCCGGCCAAAGACGGCGGATCAATCA
CCGTTCGCGGCTGTACCCCACAGAACCCGCTCATTCCGTCCAACACCAACGAGACCTGCGGCGGAAATGTCCTCGACGCC
GTCACAGCCCGCCTTATCCATTACAACCCTGACACCGCCAAGCCGGAGATGGACATCGCCCAGTCCATCGAGACCAAGGA
CAACCAGAACTTCACCGTCAAGATCAAGCCGGGATACAAGTTCTCCGACGGCACCAAGGTCAAGGCTCAGAATTTCGTCG
CCGGTTGGAACTGGGCCGCCTACGGCCCCAATGCCCAGCAGTCCGGCTACTTCTTCGAGCCGATCGAGGGGTACGCCGAC
GAACAGTGTGGTGACGAAGCTTGTAAAACCAAGCCCAAGGTCAAGACCATGAGCGGCCTCAAAGTCGTTGACGACCACAC
CTTCACCATCAAAACCACCGAAAAGGTCTCTAACCTCAAGGTACGTTTGGGCTACACCGCCTTCGCCCCACTGCCGGATG
CCTTCCTCAAGGATCCGACCAACAAGAAGTGGGAGAAGATGCCAATCGGCGCCGGGCCATACAAGGTCACCGACAACACC
GCCACCGCGATCACCGTCGCCAAGAATGAGAACTACGCCGGGGCGTACCAAGGCCACGTCGACAAGGTCACCTTCAAGAT
CTACAACGACGCCAGTCCGGCCTACAACGACACGGTCGCCAACAACCTCGACATCAACGACCTCGTCCCGACCGACCAGC
TCACCAACGACCAGTGGAAGAGTGACCTGTCTGGCCGCTGGGCCATCCGTCAGTCGGGCATCAACCAGACACTGACCTAC
TCCGGCAAGGACAAGCAGCTGGCCAGCAACAAGGACCTAGTTAAGGCCCTTGGCATGGACATCGACCGCGAGACCATCAC
GAAGCAGATTTTCGCTGGCTCCCGAACCCCCGCTGATGGCTGGGTCTCCCCCGTCGTCGACGGGTACAAGAAAGACCAAT
GTGGCCAGATGTGCAAGTACGACAAGGACAAAGCCGTCGAGCTGTACAAGAAGTCCGGTGGGTACAAGGGCACCCTGACC
ATTGCGGTCAACGGTGATGGCGACCACAAGGCATGGTCTCAGGCGATCTGCAACGGCTGGAAGAACGACCTTGGCCTCAA
GTGCCAGCTCAAGGTCACCCCGGACTTCAAGACCCTGCGCGACATGATCACCAAGCGCCAGCTCCAGGGCTTCTTCCGCA
CCGGATGGCAGATGGATTACCCCTCCATCGAGAACTTCTTGACCCCGATGTACGCCACCGGCGCCTCAAGCAACGACAAC
GACTACTCGAACAAGGCCTTCGACGCCAAGCTCGCAGACGCCGCTGCCGCTACCAACACTGGGGAAGCCAACAAGCTGTA
CCAGGAGGCCGAGAAGATGCTGGTGGAGGACCCACCCAACATCCCGCTGTGGACGACCTCGACCCCATTCGCGTGGTCAA
ACAAGGTCGCCAATGTCAAGCTCACTCCATTCGGCACGATTGATTTCCAGTCGGTCAGCGTGAAGTGA

Upstream 100 bases:

>100_bases
TGTATCAGCCTTACGAAACGGCTGACGAATGACGCTTCGCGATGGCATGGTGTCCCGAAACCGTCGGTTGGATGCCGACG
TGACGTGAGAAGGAGACACC

Downstream 100 bases:

>100_bases
TTCATCCGTGATGACGCACCCGTCGGTCTGCCGAATTAGTCTCGACGGACCGACGGTGTCGTGAGGAACACCATGTCCAG
ATACATCGTCAGACGCATCC

Product: putative peptide transport system secreted peptide-binding protein

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MRHMRPLIALSLAGLMTLSACGEDVAAKDDSAAGSSAAGGSNNSAPAKDGGSITVRGCTPQNPLIPSNTNETCGGNVLDA
VTARLIHYNPDTAKPEMDIAQSIETKDNQNFTVKIKPGYKFSDGTKVKAQNFVAGWNWAAYGPNAQQSGYFFEPIEGYAD
EQCGDEACKTKPKVKTMSGLKVVDDHTFTIKTTEKVSNLKVRLGYTAFAPLPDAFLKDPTNKKWEKMPIGAGPYKVTDNT
ATAITVAKNENYAGAYQGHVDKVTFKIYNDASPAYNDTVANNLDINDLVPTDQLTNDQWKSDLSGRWAIRQSGINQTLTY
SGKDKQLASNKDLVKALGMDIDRETITKQIFAGSRTPADGWVSPVVDGYKKDQCGQMCKYDKDKAVELYKKSGGYKGTLT
IAVNGDGDHKAWSQAICNGWKNDLGLKCQLKVTPDFKTLRDMITKRQLQGFFRTGWQMDYPSIENFLTPMYATGASSNDN
DYSNKAFDAKLADAAAATNTGEANKLYQEAEKMLVEDPPNIPLWTTSTPFAWSNKVANVKLTPFGTIDFQSVSVK

Sequences:

>Translated_555_residues
MRHMRPLIALSLAGLMTLSACGEDVAAKDDSAAGSSAAGGSNNSAPAKDGGSITVRGCTPQNPLIPSNTNETCGGNVLDA
VTARLIHYNPDTAKPEMDIAQSIETKDNQNFTVKIKPGYKFSDGTKVKAQNFVAGWNWAAYGPNAQQSGYFFEPIEGYAD
EQCGDEACKTKPKVKTMSGLKVVDDHTFTIKTTEKVSNLKVRLGYTAFAPLPDAFLKDPTNKKWEKMPIGAGPYKVTDNT
ATAITVAKNENYAGAYQGHVDKVTFKIYNDASPAYNDTVANNLDINDLVPTDQLTNDQWKSDLSGRWAIRQSGINQTLTY
SGKDKQLASNKDLVKALGMDIDRETITKQIFAGSRTPADGWVSPVVDGYKKDQCGQMCKYDKDKAVELYKKSGGYKGTLT
IAVNGDGDHKAWSQAICNGWKNDLGLKCQLKVTPDFKTLRDMITKRQLQGFFRTGWQMDYPSIENFLTPMYATGASSNDN
DYSNKAFDAKLADAAAATNTGEANKLYQEAEKMLVEDPPNIPLWTTSTPFAWSNKVANVKLTPFGTIDFQSVSVK
>Mature_555_residues
MRHMRPLIALSLAGLMTLSACGEDVAAKDDSAAGSSAAGGSNNSAPAKDGGSITVRGCTPQNPLIPSNTNETCGGNVLDA
VTARLIHYNPDTAKPEMDIAQSIETKDNQNFTVKIKPGYKFSDGTKVKAQNFVAGWNWAAYGPNAQQSGYFFEPIEGYAD
EQCGDEACKTKPKVKTMSGLKVVDDHTFTIKTTEKVSNLKVRLGYTAFAPLPDAFLKDPTNKKWEKMPIGAGPYKVTDNT
ATAITVAKNENYAGAYQGHVDKVTFKIYNDASPAYNDTVANNLDINDLVPTDQLTNDQWKSDLSGRWAIRQSGINQTLTY
SGKDKQLASNKDLVKALGMDIDRETITKQIFAGSRTPADGWVSPVVDGYKKDQCGQMCKYDKDKAVELYKKSGGYKGTLT
IAVNGDGDHKAWSQAICNGWKNDLGLKCQLKVTPDFKTLRDMITKRQLQGFFRTGWQMDYPSIENFLTPMYATGASSNDN
DYSNKAFDAKLADAAAATNTGEANKLYQEAEKMLVEDPPNIPLWTTSTPFAWSNKVANVKLTPFGTIDFQSVSVK

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=439, Percent_Identity=25.5125284738041, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1787495, Length=445, Percent_Identity=24.9438202247191, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1789397, Length=435, Percent_Identity=23.9080459770115, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1787052, Length=439, Percent_Identity=25.5125284738041, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789966, Length=501, Percent_Identity=22.7544910179641, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 60506; Mature: 60506

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHMRPLIALSLAGLMTLSACGEDVAAKDDSAAGSSAAGGSNNSAPAKDGGSITVRGCTP
CCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
QNPLIPSNTNETCGGNVLDAVTARLIHYNPDTAKPEMDIAQSIETKDNQNFTVKIKPGYK
CCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCEEEEEECCCEE
FSDGTKVKAQNFVAGWNWAAYGPNAQQSGYFFEPIEGYADEQCGDEACKTKPKVKTMSGL
ECCCCEEEECCEEECCCCEECCCCCCCCCEEECCCCCCCCHHCCHHHHCCCCCCCCCCCC
KVVDDHTFTIKTTEKVSNLKVRLGYTAFAPLPDAFLKDPTNKKWEKMPIGAGPYKVTDNT
EEECCCEEEEEECCCCCCEEEEECEEEECCCCHHHHCCCCCCCHHCCCCCCCCEEEECCC
ATAITVAKNENYAGAYQGHVDKVTFKIYNDASPAYNDTVANNLDINDLVPTDQLTNDQWK
EEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHH
SDLSGRWAIRQSGINQTLTYSGKDKQLASNKDLVKALGMDIDRETITKQIFAGSRTPADG
HCCCCEEEEECCCCCCEEEECCCCCCHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
WVSPVVDGYKKDQCGQMCKYDKDKAVELYKKSGGYKGTLTIAVNGDGDHKAWSQAICNGW
CHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCCC
KNDLGLKCQLKVTPDFKTLRDMITKRQLQGFFRTGWQMDYPSIENFLTPMYATGASSNDN
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEECCCCCCCC
DYSNKAFDAKLADAAAATNTGEANKLYQEAEKMLVEDPPNIPLWTTSTPFAWSNKVANVK
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEE
LTPFGTIDFQSVSVK
ECCCCCEECCEEECC
>Mature Secondary Structure
MRHMRPLIALSLAGLMTLSACGEDVAAKDDSAAGSSAAGGSNNSAPAKDGGSITVRGCTP
CCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
QNPLIPSNTNETCGGNVLDAVTARLIHYNPDTAKPEMDIAQSIETKDNQNFTVKIKPGYK
CCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCEEEEEECCCEE
FSDGTKVKAQNFVAGWNWAAYGPNAQQSGYFFEPIEGYADEQCGDEACKTKPKVKTMSGL
ECCCCEEEECCEEECCCCEECCCCCCCCCEEECCCCCCCCHHCCHHHHCCCCCCCCCCCC
KVVDDHTFTIKTTEKVSNLKVRLGYTAFAPLPDAFLKDPTNKKWEKMPIGAGPYKVTDNT
EEECCCEEEEEECCCCCCEEEEECEEEECCCCHHHHCCCCCCCHHCCCCCCCCEEEECCC
ATAITVAKNENYAGAYQGHVDKVTFKIYNDASPAYNDTVANNLDINDLVPTDQLTNDQWK
EEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHH
SDLSGRWAIRQSGINQTLTYSGKDKQLASNKDLVKALGMDIDRETITKQIFAGSRTPADG
HCCCCEEEEECCCCCCEEEECCCCCCHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
WVSPVVDGYKKDQCGQMCKYDKDKAVELYKKSGGYKGTLTIAVNGDGDHKAWSQAICNGW
CHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCCC
KNDLGLKCQLKVTPDFKTLRDMITKRQLQGFFRTGWQMDYPSIENFLTPMYATGASSNDN
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEECCCCCCCC
DYSNKAFDAKLADAAAATNTGEANKLYQEAEKMLVEDPPNIPLWTTSTPFAWSNKVANVK
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEE
LTPFGTIDFQSVSVK
ECCCCCEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]