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The map label for this gene is ynbC [C]

Identifier: 50843580

GI number: 50843580

Start: 2321679

End: 2322800

Strand: Direct

Name: ynbC [C]

Synonym: PPA2142

Alternate gene names: 50843580

Gene position: 2321679-2322800 (Clockwise)

Preceding gene: 50843579

Following gene: 50843581

Centisome position: 90.68

GC content: 59.36

Gene sequence:

>1122_bases
ATGACCTTCACCAAGAAGCTGAGCGCACTGGCCATTGCGGGCACTATGGCTATTACCGGAGCCTCTATAGCGACAGTTCC
GGCTGTGGCTGCTGACAAAGCTCCAGCCCCGGCCACTGCCACCGTCCAGTCGAAACTCATCACCGGGTACACCACCAGCA
CTGATCAGTGGGGCACCAAGCTCTTCTTCCGCAAGAACATCGTCCCCAACGCTAAGGGTGCCGTCGTCATCGTCCACGGC
GCAGCTGAACACTCCGGCCGCTATGACTACCTGGCTAAGCGTCTCAACGACGCCGGCTACTCAACCTACCGCTTCGATCA
CCGCGGGCATGGTCGTAGCGCGCGCCCATACGTCGACAACGCCATCCCACGTGGCCACATCGACGATTGGAGCAACCTCG
TCAACGACGTGCACCAGTTCGTGCAAATCGCCCACCAGGAAAACGCCGGCAAAAAGGTGTTCCTCTTCGGGCACTCCATG
GGTAGTTTCGCCGTCCAATCCTACGGCGCTAAGTACCCGGGAACCGTTGCCGGCATCGTGAGCAACGGTGGTGGCATTGC
CGTCAACCCATGGGGCCGCGACACCGAAGGGCCGGAGAAGGTCACCGCACACGACCTCACCGACGCCGAGAAGAACGCCG
CACCCACGATCAGCCAACTCCTGCCGATGGATAAGCTCACCAGCTTTAACGGCATCCTGCTGACCCAAGCGGTGCGCCAT
CCCAAGGCCATCCACCTGCCCTCGACCGCCGCCGAGGCCTTCATCCAGTTCAAGAACCCGCTGGCGAACGGCGTTTGCAC
CGACCCGGCCGTCATCGAGGACTACAAGAAGGATCCCCTCAACAACAAGTACATGAGCCTCGGCATGGTCAAGCAGATGG
GCGTCGCACAGGTGTACAACACCTTTAACGCTCCATCCTTTAGCGAGCCGACCCTTATCATGCACGGCGCCAACGACGGC
ATCGTCCCCTCGTACTTCGACGTCAACTGGTACAACGCCATTGGCTCTAAGGACAAGAAGATCATCGAGTGGGAAGGCCT
GATGCACGAGACCATCAACGAGCCCGTCAAAGATCAGGTCGACGATACGATCATCAACTGGATTAACGCTCACAACAAGT
GA

Upstream 100 bases:

>100_bases
ATGCGTACACGTCCCCAAGCCATCAGATGAGCCTCCATTCATCTAGTGTCAAGGCTACGGCCATTAAGGCACAAACATCA
CATGCAAAGGAGCGTGGGAC

Downstream 100 bases:

>100_bases
GCACTACTCAATGATGTCCTCATAGCGGCTGAGCCCAGGTATTCCCTGGGCTCAGCCGGTGCCGTTATACGATCACTAGG
TAAGTGATAAATCACCATCA

Product: putative lysophospholipase

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Hydrolase Fold Family; Acylglycerol Lipase; Lipase; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase L2 PLDB; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Monoacylglycerol Lipase; Monoglyceride Lipase; Alpha/Beta Hydrolase Superfamily Lysophospholipase

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MTFTKKLSALAIAGTMAITGASIATVPAVAADKAPAPATATVQSKLITGYTTSTDQWGTKLFFRKNIVPNAKGAVVIVHG
AAEHSGRYDYLAKRLNDAGYSTYRFDHRGHGRSARPYVDNAIPRGHIDDWSNLVNDVHQFVQIAHQENAGKKVFLFGHSM
GSFAVQSYGAKYPGTVAGIVSNGGGIAVNPWGRDTEGPEKVTAHDLTDAEKNAAPTISQLLPMDKLTSFNGILLTQAVRH
PKAIHLPSTAAEAFIQFKNPLANGVCTDPAVIEDYKKDPLNNKYMSLGMVKQMGVAQVYNTFNAPSFSEPTLIMHGANDG
IVPSYFDVNWYNAIGSKDKKIIEWEGLMHETINEPVKDQVDDTIINWINAHNK

Sequences:

>Translated_373_residues
MTFTKKLSALAIAGTMAITGASIATVPAVAADKAPAPATATVQSKLITGYTTSTDQWGTKLFFRKNIVPNAKGAVVIVHG
AAEHSGRYDYLAKRLNDAGYSTYRFDHRGHGRSARPYVDNAIPRGHIDDWSNLVNDVHQFVQIAHQENAGKKVFLFGHSM
GSFAVQSYGAKYPGTVAGIVSNGGGIAVNPWGRDTEGPEKVTAHDLTDAEKNAAPTISQLLPMDKLTSFNGILLTQAVRH
PKAIHLPSTAAEAFIQFKNPLANGVCTDPAVIEDYKKDPLNNKYMSLGMVKQMGVAQVYNTFNAPSFSEPTLIMHGANDG
IVPSYFDVNWYNAIGSKDKKIIEWEGLMHETINEPVKDQVDDTIINWINAHNK
>Mature_372_residues
TFTKKLSALAIAGTMAITGASIATVPAVAADKAPAPATATVQSKLITGYTTSTDQWGTKLFFRKNIVPNAKGAVVIVHGA
AEHSGRYDYLAKRLNDAGYSTYRFDHRGHGRSARPYVDNAIPRGHIDDWSNLVNDVHQFVQIAHQENAGKKVFLFGHSMG
SFAVQSYGAKYPGTVAGIVSNGGGIAVNPWGRDTEGPEKVTAHDLTDAEKNAAPTISQLLPMDKLTSFNGILLTQAVRHP
KAIHLPSTAAEAFIQFKNPLANGVCTDPAVIEDYKKDPLNNKYMSLGMVKQMGVAQVYNTFNAPSFSEPTLIMHGANDGI
VPSYFDVNWYNAIGSKDKKIIEWEGLMHETINEPVKDQVDDTIINWINAHNK

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51242953, Length=304, Percent_Identity=24.6710526315789, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI6005786, Length=304, Percent_Identity=24.6710526315789, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40494; Mature: 40363

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTKKLSALAIAGTMAITGASIATVPAVAADKAPAPATATVQSKLITGYTTSTDQWGTK
CCCHHHHHHHHHHHHHHCCCCCHHHHCHHHCCCCCCCCHHHHHHHEEECCCCCCCCCCCE
LFFRKNIVPNAKGAVVIVHGAAEHSGRYDYLAKRLNDAGYSTYRFDHRGHGRSARPYVDN
EEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHC
AIPRGHIDDWSNLVNDVHQFVQIAHQENAGKKVFLFGHSMGSFAVQSYGAKYPGTVAGIV
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCEEEEE
SNGGGIAVNPWGRDTEGPEKVTAHDLTDAEKNAAPTISQLLPMDKLTSFNGILLTQAVRH
ECCCCEEECCCCCCCCCCCCEEHHCCCCCCCCCCCCHHHHCCHHHHCCCCCHHHHHHHCC
PKAIHLPSTAAEAFIQFKNPLANGVCTDPAVIEDYKKDPLNNKYMSLGMVKQMGVAQVYN
CCEEECCCHHHHHHHHHHCHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
TFNAPSFSEPTLIMHGANDGIVPSYFDVNWYNAIGSKDKKIIEWEGLMHETINEPVKDQV
HCCCCCCCCCEEEEECCCCCCCCCEECCCHHHHCCCCCCEEEEHHHHHHHHHCCHHHHHH
DDTIINWINAHNK
HHHHHHHHHCCCC
>Mature Secondary Structure 
TFTKKLSALAIAGTMAITGASIATVPAVAADKAPAPATATVQSKLITGYTTSTDQWGTK
CCHHHHHHHHHHHHHHCCCCCHHHHCHHHCCCCCCCCHHHHHHHEEECCCCCCCCCCCE
LFFRKNIVPNAKGAVVIVHGAAEHSGRYDYLAKRLNDAGYSTYRFDHRGHGRSARPYVDN
EEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHC
AIPRGHIDDWSNLVNDVHQFVQIAHQENAGKKVFLFGHSMGSFAVQSYGAKYPGTVAGIV
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCEEEEE
SNGGGIAVNPWGRDTEGPEKVTAHDLTDAEKNAAPTISQLLPMDKLTSFNGILLTQAVRH
ECCCCEEECCCCCCCCCCCCEEHHCCCCCCCCCCCCHHHHCCHHHHCCCCCHHHHHHHCC
PKAIHLPSTAAEAFIQFKNPLANGVCTDPAVIEDYKKDPLNNKYMSLGMVKQMGVAQVYN
CCEEECCCHHHHHHHHHHCHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
TFNAPSFSEPTLIMHGANDGIVPSYFDVNWYNAIGSKDKKIIEWEGLMHETINEPVKDQV
HCCCCCCCCCEEEEECCCCCCCCCEECCCHHHHCCCCCCEEEEHHHHHHHHHCCHHHHHH
DDTIINWINAHNK
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA