Click here to switch to the map view.

The map label for this gene is yjeA [H]

Identifier: 50843581

GI number: 50843581

Start: 2322990

End: 2324483

Strand: Direct

Name: yjeA [H]

Synonym: PPA2143

Alternate gene names: 50843581

Gene position: 2322990-2324483 (Clockwise)

Preceding gene: 50843580

Following gene: 50843582

Centisome position: 90.73

GC content: 59.1

Gene sequence:

>1494_bases
ATGTTGCCGAAACCTAACCTTCCTCTGCGGGTCACAGCCGTCGCACTCACGACCTGCCTAGCGCTCAGCGCCTGCTCCTC
CCATAGCGATGTGAAGAACCCCAGCCAGTCCGGCAGTTCCTCCACTGCTGGCGTATCAAACGCCACCTTGGCGAAGATTC
CAGCCGCTCAGGCCGGGGCAACGGACATCACCTTCAATGCCGCCCCCGAGAAGGTCAAGGCCATCTTCCCGCGCTTCGCA
AAGGCGCGGAACCTCAGCACCGCAGTAGAGGTCGTCAAAGGGCGCATGCTGCGCGATTCCTGGCAGCAAAACGCTTCTGA
CGTCAACGTCACCTCCCAGATCATTGCCTCCAATGACGCCGCATTGGGCGTGCTGGTGACCAACCAGACCACTATCGCCG
GTAAGAAGCAGACGATTCCGGCCACCATCTGGTACTCGACCGCAGCCCAGCAGTCATACTCCTCTCCCGCCCTCGTCAAG
CCCGACAAATGGGCTGACCTGACGACAGCGCTGCAGGATGCTGGCAAGGATCAGTCCCTCGACGGCGGAAAAATTGCCGC
GGCCGTCAAGGCGAAATCGGCCCCGTATGGCAGCGGCCCCGCCCTCGGTTTTAGCCACAACGGTGACCTCTTGGCCAGCT
TTGCCTCGGGAGTCGTCACCGATAAGGCCGTCACCCTCGTCGTTCCCAGCGACAAAACGAAGGGAATGCTCAGCAACTTC
GGCACCCAGGCTCAGAAAGCCTCAACAAATCCCGGCACGTTCACTGGAACTACCTCCCAGCCCGTAGATGAGTCCCTCAA
AGCCACGGACACGAGTGGTCGCCCACCAACAGCCGTCGGCCCGGACTGTCGGGTACTGCACTGCGTCGCAGTCACCTATG
ACGATGGCCCCAGCGCCATGACCCCAGAACTTCTCAACACCATCAAGAAGTTCAAGTTGTCGATCACCTTCTTCGAGATG
GGCAACAGCATCATGGCCTTCCCAAATACGGCCCAGAAGGTGGCTGCCGCCGGCATGGAGATCGGCAACCACACAGTCAC
CCACCCGAATCTTCCGGCGAAGACCCCGGATCGCATCCGTCGTGAACTGGAGCACAACTCGCAGCTCATTAAGCAGTTCA
CCGGGGCCACTCCGCTGTTGTTCCGCCCACCCTATGGCGCTCACAACGACACTGTTGACAAGGTCGCCAAGGACAATGGC
ATGGCAATCATTCAGTGGCAGATTGACAGCGAAGACTGGAAGAACCGCAACCCTGAGATGACGTATAAGAACGTCATGAC
CGCGCTGCCGTACACCGCACCTATCGTCCTTGAACACGACATCCAGAAGGCATCAATCGACGCCGCCCCGCAGATCTATA
AGGATCTTGAAGCAAAGGGCAAGACCATCGTCAGCGTCAGTGAACTGTCCCTCAACACCGGGGGTTACCAGGCCGGTCAC
GCTTACTGCAATGGAACGGTCAAGCCACAAAGCGGCTATAACTGCAAAGGATGA

Upstream 100 bases:

>100_bases
AATCACCATCACGTGGCATTACAGCGCGGCTTGAGCATCGTCACCACGACCCGCTCGTCATTGCTTCGGTGAGCCACACA
TACGAGGTAAGGTCTCCTCC

Downstream 100 bases:

>100_bases
GGATCCGACCGGGGGCGCGCACGGCTGTAGAAGGTCTCACTCTGCTGGCCTGTGCTGCGCTGGGGTTCTACCTGCTGCTC
AGTGGCCGCGTTCACCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MLPKPNLPLRVTAVALTTCLALSACSSHSDVKNPSQSGSSSTAGVSNATLAKIPAAQAGATDITFNAAPEKVKAIFPRFA
KARNLSTAVEVVKGRMLRDSWQQNASDVNVTSQIIASNDAALGVLVTNQTTIAGKKQTIPATIWYSTAAQQSYSSPALVK
PDKWADLTTALQDAGKDQSLDGGKIAAAVKAKSAPYGSGPALGFSHNGDLLASFASGVVTDKAVTLVVPSDKTKGMLSNF
GTQAQKASTNPGTFTGTTSQPVDESLKATDTSGRPPTAVGPDCRVLHCVAVTYDDGPSAMTPELLNTIKKFKLSITFFEM
GNSIMAFPNTAQKVAAAGMEIGNHTVTHPNLPAKTPDRIRRELEHNSQLIKQFTGATPLLFRPPYGAHNDTVDKVAKDNG
MAIIQWQIDSEDWKNRNPEMTYKNVMTALPYTAPIVLEHDIQKASIDAAPQIYKDLEAKGKTIVSVSELSLNTGGYQAGH
AYCNGTVKPQSGYNCKG

Sequences:

>Translated_497_residues
MLPKPNLPLRVTAVALTTCLALSACSSHSDVKNPSQSGSSSTAGVSNATLAKIPAAQAGATDITFNAAPEKVKAIFPRFA
KARNLSTAVEVVKGRMLRDSWQQNASDVNVTSQIIASNDAALGVLVTNQTTIAGKKQTIPATIWYSTAAQQSYSSPALVK
PDKWADLTTALQDAGKDQSLDGGKIAAAVKAKSAPYGSGPALGFSHNGDLLASFASGVVTDKAVTLVVPSDKTKGMLSNF
GTQAQKASTNPGTFTGTTSQPVDESLKATDTSGRPPTAVGPDCRVLHCVAVTYDDGPSAMTPELLNTIKKFKLSITFFEM
GNSIMAFPNTAQKVAAAGMEIGNHTVTHPNLPAKTPDRIRRELEHNSQLIKQFTGATPLLFRPPYGAHNDTVDKVAKDNG
MAIIQWQIDSEDWKNRNPEMTYKNVMTALPYTAPIVLEHDIQKASIDAAPQIYKDLEAKGKTIVSVSELSLNTGGYQAGH
AYCNGTVKPQSGYNCKG
>Mature_497_residues
MLPKPNLPLRVTAVALTTCLALSACSSHSDVKNPSQSGSSSTAGVSNATLAKIPAAQAGATDITFNAAPEKVKAIFPRFA
KARNLSTAVEVVKGRMLRDSWQQNASDVNVTSQIIASNDAALGVLVTNQTTIAGKKQTIPATIWYSTAAQQSYSSPALVK
PDKWADLTTALQDAGKDQSLDGGKIAAAVKAKSAPYGSGPALGFSHNGDLLASFASGVVTDKAVTLVVPSDKTKGMLSNF
GTQAQKASTNPGTFTGTTSQPVDESLKATDTSGRPPTAVGPDCRVLHCVAVTYDDGPSAMTPELLNTIKKFKLSITFFEM
GNSIMAFPNTAQKVAAAGMEIGNHTVTHPNLPAKTPDRIRRELEHNSQLIKQFTGATPLLFRPPYGAHNDTVDKVAKDNG
MAIIQWQIDSEDWKNRNPEMTYKNVMTALPYTAPIVLEHDIQKASIDAAPQIYKDLEAKGKTIVSVSELSLNTGGYQAGH
AYCNGTVKPQSGYNCKG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=221, Percent_Identity=27.1493212669683, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6323338, Length=167, Percent_Identity=29.940119760479, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 52521; Mature: 52521

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPKPNLPLRVTAVALTTCLALSACSSHSDVKNPSQSGSSSTAGVSNATLAKIPAAQAGA
CCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCC
TDITFNAAPEKVKAIFPRFAKARNLSTAVEVVKGRMLRDSWQQNASDVNVTSQIIASNDA
CEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC
ALGVLVTNQTTIAGKKQTIPATIWYSTAAQQSYSSPALVKPDKWADLTTALQDAGKDQSL
EEEEEEECCEEECCCCCCCCEEEEECHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
DGGKIAAAVKAKSAPYGSGPALGFSHNGDLLASFASGVVTDKAVTLVVPSDKTKGMLSNF
CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEECCEEEEEECCCCCHHHHHHC
GTQAQKASTNPGTFTGTTSQPVDESLKATDTSGRPPTAVGPDCRVLHCVAVTYDDGPSAM
CCHHHHCCCCCCCEECCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC
TPELLNTIKKFKLSITFFEMGNSIMAFPNTAQKVAAAGMEIGNHTVTHPNLPAKTPDRIR
CHHHHHHHHHHEEEEEEEECCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHH
RELEHNSQLIKQFTGATPLLFRPPYGAHNDTVDKVAKDNGMAIIQWQIDSEDWKNRNPEM
HHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCEEEEEEEECCHHHCCCCCCH
TYKNVMTALPYTAPIVLEHDIQKASIDAAPQIYKDLEAKGKTIVSVSELSLNTGGYQAGH
HHHHHHHHCCCCCCEEEECCCCHHCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCCCCCC
AYCNGTVKPQSGYNCKG
EEECCEECCCCCCCCCC
>Mature Secondary Structure
MLPKPNLPLRVTAVALTTCLALSACSSHSDVKNPSQSGSSSTAGVSNATLAKIPAAQAGA
CCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCC
TDITFNAAPEKVKAIFPRFAKARNLSTAVEVVKGRMLRDSWQQNASDVNVTSQIIASNDA
CEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC
ALGVLVTNQTTIAGKKQTIPATIWYSTAAQQSYSSPALVKPDKWADLTTALQDAGKDQSL
EEEEEEECCEEECCCCCCCCEEEEECHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
DGGKIAAAVKAKSAPYGSGPALGFSHNGDLLASFASGVVTDKAVTLVVPSDKTKGMLSNF
CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEECCEEEEEECCCCCHHHHHHC
GTQAQKASTNPGTFTGTTSQPVDESLKATDTSGRPPTAVGPDCRVLHCVAVTYDDGPSAM
CCHHHHCCCCCCCEECCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC
TPELLNTIKKFKLSITFFEMGNSIMAFPNTAQKVAAAGMEIGNHTVTHPNLPAKTPDRIR
CHHHHHHHHHHEEEEEEEECCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHH
RELEHNSQLIKQFTGATPLLFRPPYGAHNDTVDKVAKDNGMAIIQWQIDSEDWKNRNPEM
HHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCEEEEEEEECCHHHCCCCCCH
TYKNVMTALPYTAPIVLEHDIQKASIDAAPQIYKDLEAKGKTIVSVSELSLNTGGYQAGH
HHHHHHHHCCCCCCEEEECCCCHHCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCCCCCC
AYCNGTVKPQSGYNCKG
EEECCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]