| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843570
Identifier: 50843570
GI number: 50843570
Start: 2309421
End: 2310395
Strand: Direct
Name: 50843570
Synonym: PPA2132
Alternate gene names: NA
Gene position: 2309421-2310395 (Clockwise)
Preceding gene: 50843567
Following gene: 50843572
Centisome position: 90.2
GC content: 62.97
Gene sequence:
>975_bases GTGAGCGCGAAGTATCGTCGGGCTCTGGCCCTGACGTCGGTTCTCGTCATCTCGACGTCAATCCTCACCCCGCCGGTATG TCCTACCCCCACGCCTTGGTCGGTTTCGGCTGCCCATGCTGCGCCTCCGGGAGCCACGCCTCCTGGCAACCTGACGATGA ACGCGTCCCTCGACCGGTCGGGCACCGTGCAGGTCAAAGGGACATTACGAACCCACACCAAGCAACCGGTTTCAGGGGCC CTCATCAACCTGGCAGTAGATGGAAAGCCCCTTGCCGTCGGCGTGACACACGACAACGGATCGTGGTCTGGCACCTTCCG GTTGCCTCCCACTATGCAAGCTGGCGCCCACGAGTTGTCCGCCACCTTCGACGGCACCGAAGGGGTCGGGGCAGCCTCAG CAAGCGGCACTTTCTCAATCGCTGCCCAACCTACTGTCCTCACCGCAGCCGTGAAACCGACGATCGCCGCCCCGGGAGCA TTACTCAATGTCAACGGGACAGTGACCCTTCCCACTCACCGTCGGGTCACCGACAGCCACGTAGCGATTCTGCTCGGTAC TGACGGCCAGACGGCATTAACGGCCCCCACCGACTCCCAGGGCAATTATCAAGCCACGTTCCAGGTGCCGCTGGATGCCC CAAACGGCCCACTCATGGTCACGGTCAAATTGGTCGATTCCCGGTATGGAGTTTCGCAACAGGCGGTAACGGTGCAGGTG AAGTCAGCCAGCACCCCGGTCGCCACTCATGACAGTGAGGAATCCCCGGACAGCCGGATCCCTAAGACGTCGACTAGCCC TATTCCAACAGCGCGACGTAGCGTCGTGGACGCCTTCGGTGGGCGCAAACCGATTCTCATCCTCGCGGGAGTCATCGGGG TTCTGCTGCTCGGTGTCCTCCTCGGCTCCTTGACCCGCCGCCGCGGCGGCAACGTCCATTCCAGCGACGAGGGGGATGGC CCTGACTCGCACTAA
Upstream 100 bases:
>100_bases GTCGGCATAACCCTAAGCCTAGGAGATGGGGCAGTGCTCGTGTCGTCACACCATCACGTCGCTTCGCCTATCATATTCGC GATCGACTGAAGGAGGACGC
Downstream 100 bases:
>100_bases AAGCGTCACCCACTGACCGTGCGATCAGGCGTCCGCGTCTGCAACAACCTGCAAGACCGAACGGCAGCGCTCACGCAGGG CCGAGACGATACCGTCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSAKYRRALALTSVLVISTSILTPPVCPTPTPWSVSAAHAAPPGATPPGNLTMNASLDRSGTVQVKGTLRTHTKQPVSGA LINLAVDGKPLAVGVTHDNGSWSGTFRLPPTMQAGAHELSATFDGTEGVGAASASGTFSIAAQPTVLTAAVKPTIAAPGA LLNVNGTVTLPTHRRVTDSHVAILLGTDGQTALTAPTDSQGNYQATFQVPLDAPNGPLMVTVKLVDSRYGVSQQAVTVQV KSASTPVATHDSEESPDSRIPKTSTSPIPTARRSVVDAFGGRKPILILAGVIGVLLLGVLLGSLTRRRGGNVHSSDEGDG PDSH
Sequences:
>Translated_324_residues MSAKYRRALALTSVLVISTSILTPPVCPTPTPWSVSAAHAAPPGATPPGNLTMNASLDRSGTVQVKGTLRTHTKQPVSGA LINLAVDGKPLAVGVTHDNGSWSGTFRLPPTMQAGAHELSATFDGTEGVGAASASGTFSIAAQPTVLTAAVKPTIAAPGA LLNVNGTVTLPTHRRVTDSHVAILLGTDGQTALTAPTDSQGNYQATFQVPLDAPNGPLMVTVKLVDSRYGVSQQAVTVQV KSASTPVATHDSEESPDSRIPKTSTSPIPTARRSVVDAFGGRKPILILAGVIGVLLLGVLLGSLTRRRGGNVHSSDEGDG PDSH >Mature_323_residues SAKYRRALALTSVLVISTSILTPPVCPTPTPWSVSAAHAAPPGATPPGNLTMNASLDRSGTVQVKGTLRTHTKQPVSGAL INLAVDGKPLAVGVTHDNGSWSGTFRLPPTMQAGAHELSATFDGTEGVGAASASGTFSIAAQPTVLTAAVKPTIAAPGAL LNVNGTVTLPTHRRVTDSHVAILLGTDGQTALTAPTDSQGNYQATFQVPLDAPNGPLMVTVKLVDSRYGVSQQAVTVQVK SASTPVATHDSEESPDSRIPKTSTSPIPTARRSVVDAFGGRKPILILAGVIGVLLLGVLLGSLTRRRGGNVHSSDEGDGP DSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33082; Mature: 32951
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKYRRALALTSVLVISTSILTPPVCPTPTPWSVSAAHAAPPGATPPGNLTMNASLDRS CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC GTVQVKGTLRTHTKQPVSGALINLAVDGKPLAVGVTHDNGSWSGTFRLPPTMQAGAHELS CEEEEEEEEECCCCCCCCCEEEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEE ATFDGTEGVGAASASGTFSIAAQPTVLTAAVKPTIAAPGALLNVNGTVTLPTHRRVTDSH EEECCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCEEEECCCEEECCCCCCCCCCE VAILLGTDGQTALTAPTDSQGNYQATFQVPLDAPNGPLMVTVKLVDSRYGVSQQAVTVQV EEEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEE KSASTPVATHDSEESPDSRIPKTSTSPIPTARRSVVDAFGGRKPILILAGVIGVLLLGVL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH LGSLTRRRGGNVHSSDEGDGPDSH HHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAKYRRALALTSVLVISTSILTPPVCPTPTPWSVSAAHAAPPGATPPGNLTMNASLDRS CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC GTVQVKGTLRTHTKQPVSGALINLAVDGKPLAVGVTHDNGSWSGTFRLPPTMQAGAHELS CEEEEEEEEECCCCCCCCCEEEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEE ATFDGTEGVGAASASGTFSIAAQPTVLTAAVKPTIAAPGALLNVNGTVTLPTHRRVTDSH EEECCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCEEEECCCEEECCCCCCCCCCE VAILLGTDGQTALTAPTDSQGNYQATFQVPLDAPNGPLMVTVKLVDSRYGVSQQAVTVQV EEEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEE KSASTPVATHDSEESPDSRIPKTSTSPIPTARRSVVDAFGGRKPILILAGVIGVLLLGVL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH LGSLTRRRGGNVHSSDEGDGPDSH HHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA