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The map label for this gene is yliB [C]

Identifier: 50843507

GI number: 50843507

Start: 2242860

End: 2244656

Strand: Direct

Name: yliB [C]

Synonym: PPA2063

Alternate gene names: 50843507

Gene position: 2242860-2244656 (Clockwise)

Preceding gene: 50843504

Following gene: 50843508

Centisome position: 87.6

GC content: 56.76

Gene sequence:

>1797_bases
ATGAAGAAACCACGAAAGAGACTGCTTGTGGTGACCGCAGCAGTGGCAGCAACTCTGTTGGTTGCCTCGTGCTCGTATGG
CAGTGGCGACCCCAGTCGATCTCAGGCAAGCGGCGGCGCGCAGGACGGCAACGTATCCTTCGCGACCACCACGCCCAACT
GGATCCTCCCGGTGTCCGCACCCGGAAAGACGCAGGGTGAGAACGCCATGTTCACCCAGCTCATTTACCCCGCCTTGTTC
TCCTACAAGCTCGACGCGAAGAACGAGTTCAACATTGATGAACGCCACTCGGTGGCCAAACCTCCCACCGTGTCCGACGA
CTCACTCACCTACACCATCACCCTTAAGGACCGCACATGGAGCGACGGCGTCAAGCTCACTACGCGCGACATGGAGTTCT
GGTGGAACATCGTCACCAACAACACCGACAAGTGGGCGTCCTACCGCAAAGGCCAGTTCCCCGACAACGTCAAGGCTTTC
AAGATCATTGACGACAAGGCCTTCACCATCACCACGACTGAGAAGTACAACCCGGCATGGTTCATCAACAACCAACTGAA
CCGCCTTGTGCCAATGCCAGCCCACGCCTGGTCTAAGACCAGCGACTCCGACAAGCCCGGTGAGAAGGACCGCACCCCTG
CCGGAGCCAAGGCAATCTTCAAATACTTGAGCGCCGCCTCGGAGGACTTACAGAACTACGACACCAACAAACTCTGGAAG
ACGACTCTCGGGCCCTTCCAGCTCGGCAAGTACACCCCGAACGGTAAGGCCAAGCTCGTCGCCAGTCCTAGCTACGACGG
TGAAGACAAGGCGAGCATTTCGAGCTTCACCATGCAGCCGTACACCAGTGACGACGCTGAGTTCAACATCCTGCGCTCCG
GAAGCATCGACTACGGCTTCATCCCACCCAACTCGATGACCCAGCAAAAGTACATCGAGAAACAGGGCTACACCGTCAAA
CCGTGGTACGGCTGGTCGATCACCTACATGCCGTTTAACTTCAACAACCCGAAGTCCGGCCCGATATTCGCCCAAAAATA
TATCCGTCAGGCGATGCAACACCTCATTGATCAGGAAGGAATCTCCAAGATCATCTGGAACCGGACTGCATCCCCCACCT
GCGGCCCGGTACCCCAGCAACCTGGCACCGCCGGTAGCTCCAAAGGTTGCGCCTACGACTACAACCCTGCGAAAGCTGAG
AAACTCCTCAAAGACCACGGTTGGAATGTCACTAAGGACGGAATCACCACCTGTCAACAAGCCGGGGAGGGCGAAGGCCA
ATGCGGCAAAGGAATCAAGCAGGGGGCCAAGCTTTCCTTCACCGTGATCTCCCAATCCGGTTTCACCTCGACCACCCACA
TGTTCGCCGAACTCAAGTCGAGTTTTTCCAACGTCGGTATCAACTTGGAGATTCGAGAGGTTCCTGACTCGGTGGCTGAG
TCCCAAGCCTGTAAGCCCAACGACACGAACTGCAAGTGGGACCTGTCATTCTTTGGTTCGCAGTCATCGTGGTACTACCC
GGTCTACGCGTCCGGTGAGCGGCTCTTCCAAAGCGGTGGCCCGGTAAACCTGGGCAGCTACTCCGACAAGAAAGCCGACG
AGCTTATTGACGCGTCCATGCGTTCGAACGATCGGACAGCCCTCAAAACGTACAACGCCTATCTGGCTGAAGACCTGCCG
GTGTTATGGATGCCGAACCCGGTCAATCGCGTCTCAGCATGGAAATCCAACATCCAAGGAATCGATCCACAGGACCCCAT
GCTGTACCTGTACCCGCAGGACTGGACCATCAGATGA

Upstream 100 bases:

>100_bases
CTAGATTATTTTACATTCGAAGCATCCGAAGTCATCACCTTGCGCTACTCTTACGGTAGTAAGGGTTCATCCCACCAGGC
AACGGAGGCTGAGGGAACTC

Downstream 100 bases:

>100_bases
CCTCACGCAGAGTGAGCCCACGTTACTGACCCCGCCCGTTTCACACGGCGTCACCGGGTCGCCCCGGTGACGCCACCCCA
ACGTCCCAATCACCCATCTC

Product: putative peptide-binding transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MKKPRKRLLVVTAAVAATLLVASCSYGSGDPSRSQASGGAQDGNVSFATTTPNWILPVSAPGKTQGENAMFTQLIYPALF
SYKLDAKNEFNIDERHSVAKPPTVSDDSLTYTITLKDRTWSDGVKLTTRDMEFWWNIVTNNTDKWASYRKGQFPDNVKAF
KIIDDKAFTITTTEKYNPAWFINNQLNRLVPMPAHAWSKTSDSDKPGEKDRTPAGAKAIFKYLSAASEDLQNYDTNKLWK
TTLGPFQLGKYTPNGKAKLVASPSYDGEDKASISSFTMQPYTSDDAEFNILRSGSIDYGFIPPNSMTQQKYIEKQGYTVK
PWYGWSITYMPFNFNNPKSGPIFAQKYIRQAMQHLIDQEGISKIIWNRTASPTCGPVPQQPGTAGSSKGCAYDYNPAKAE
KLLKDHGWNVTKDGITTCQQAGEGEGQCGKGIKQGAKLSFTVISQSGFTSTTHMFAELKSSFSNVGINLEIREVPDSVAE
SQACKPNDTNCKWDLSFFGSQSSWYYPVYASGERLFQSGGPVNLGSYSDKKADELIDASMRSNDRTALKTYNAYLAEDLP
VLWMPNPVNRVSAWKSNIQGIDPQDPMLYLYPQDWTIR

Sequences:

>Translated_598_residues
MKKPRKRLLVVTAAVAATLLVASCSYGSGDPSRSQASGGAQDGNVSFATTTPNWILPVSAPGKTQGENAMFTQLIYPALF
SYKLDAKNEFNIDERHSVAKPPTVSDDSLTYTITLKDRTWSDGVKLTTRDMEFWWNIVTNNTDKWASYRKGQFPDNVKAF
KIIDDKAFTITTTEKYNPAWFINNQLNRLVPMPAHAWSKTSDSDKPGEKDRTPAGAKAIFKYLSAASEDLQNYDTNKLWK
TTLGPFQLGKYTPNGKAKLVASPSYDGEDKASISSFTMQPYTSDDAEFNILRSGSIDYGFIPPNSMTQQKYIEKQGYTVK
PWYGWSITYMPFNFNNPKSGPIFAQKYIRQAMQHLIDQEGISKIIWNRTASPTCGPVPQQPGTAGSSKGCAYDYNPAKAE
KLLKDHGWNVTKDGITTCQQAGEGEGQCGKGIKQGAKLSFTVISQSGFTSTTHMFAELKSSFSNVGINLEIREVPDSVAE
SQACKPNDTNCKWDLSFFGSQSSWYYPVYASGERLFQSGGPVNLGSYSDKKADELIDASMRSNDRTALKTYNAYLAEDLP
VLWMPNPVNRVSAWKSNIQGIDPQDPMLYLYPQDWTIR
>Mature_598_residues
MKKPRKRLLVVTAAVAATLLVASCSYGSGDPSRSQASGGAQDGNVSFATTTPNWILPVSAPGKTQGENAMFTQLIYPALF
SYKLDAKNEFNIDERHSVAKPPTVSDDSLTYTITLKDRTWSDGVKLTTRDMEFWWNIVTNNTDKWASYRKGQFPDNVKAF
KIIDDKAFTITTTEKYNPAWFINNQLNRLVPMPAHAWSKTSDSDKPGEKDRTPAGAKAIFKYLSAASEDLQNYDTNKLWK
TTLGPFQLGKYTPNGKAKLVASPSYDGEDKASISSFTMQPYTSDDAEFNILRSGSIDYGFIPPNSMTQQKYIEKQGYTVK
PWYGWSITYMPFNFNNPKSGPIFAQKYIRQAMQHLIDQEGISKIIWNRTASPTCGPVPQQPGTAGSSKGCAYDYNPAKAE
KLLKDHGWNVTKDGITTCQQAGEGEGQCGKGIKQGAKLSFTVISQSGFTSTTHMFAELKSSFSNVGINLEIREVPDSVAE
SQACKPNDTNCKWDLSFFGSQSSWYYPVYASGERLFQSGGPVNLGSYSDKKADELIDASMRSNDRTALKTYNAYLAEDLP
VLWMPNPVNRVSAWKSNIQGIDPQDPMLYLYPQDWTIR

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 66486; Mature: 66486

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPRKRLLVVTAAVAATLLVASCSYGSGDPSRSQASGGAQDGNVSFATTTPNWILPVSA
CCCCHHHEEEHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCEEEEECCCCEEEEECC
PGKTQGENAMFTQLIYPALFSYKLDAKNEFNIDERHSVAKPPTVSDDSLTYTITLKDRTW
CCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCC
SDGVKLTTRDMEFWWNIVTNNTDKWASYRKGQFPDNVKAFKIIDDKAFTITTTEKYNPAW
CCCCEEEEECEEEEEEEEECCCHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCCEE
FINNQLNRLVPMPAHAWSKTSDSDKPGEKDRTPAGAKAIFKYLSAASEDLQNYDTNKLWK
EECCCCHHEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEH
TTLGPFQLGKYTPNGKAKLVASPSYDGEDKASISSFTMQPYTSDDAEFNILRSGSIDYGF
HCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEC
IPPNSMTQQKYIEKQGYTVKPWYGWSITYMPFNFNNPKSGPIFAQKYIRQAMQHLIDQEG
CCCCCCHHHHHHHHCCCEECCEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
ISKIIWNRTASPTCGPVPQQPGTAGSSKGCAYDYNPAKAEKLLKDHGWNVTKDGITTCQQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
AGEGEGQCGKGIKQGAKLSFTVISQSGFTSTTHMFAELKSSFSNVGINLEIREVPDSVAE
CCCCCCCCCHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHH
SQACKPNDTNCKWDLSFFGSQSSWYYPVYASGERLFQSGGPVNLGSYSDKKADELIDASM
HCCCCCCCCCCEEEEEEECCCCCEEEEEEECCHHHHHCCCCEECCCCCCHHHHHHHHHHH
RSNDRTALKTYNAYLAEDLPVLWMPNPVNRVSAWKSNIQGIDPQDPMLYLYPQDWTIR
CCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MKKPRKRLLVVTAAVAATLLVASCSYGSGDPSRSQASGGAQDGNVSFATTTPNWILPVSA
CCCCHHHEEEHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCEEEEECCCCEEEEECC
PGKTQGENAMFTQLIYPALFSYKLDAKNEFNIDERHSVAKPPTVSDDSLTYTITLKDRTW
CCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCC
SDGVKLTTRDMEFWWNIVTNNTDKWASYRKGQFPDNVKAFKIIDDKAFTITTTEKYNPAW
CCCCEEEEECEEEEEEEEECCCHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCCEE
FINNQLNRLVPMPAHAWSKTSDSDKPGEKDRTPAGAKAIFKYLSAASEDLQNYDTNKLWK
EECCCCHHEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEH
TTLGPFQLGKYTPNGKAKLVASPSYDGEDKASISSFTMQPYTSDDAEFNILRSGSIDYGF
HCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEC
IPPNSMTQQKYIEKQGYTVKPWYGWSITYMPFNFNNPKSGPIFAQKYIRQAMQHLIDQEG
CCCCCCHHHHHHHHCCCEECCEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
ISKIIWNRTASPTCGPVPQQPGTAGSSKGCAYDYNPAKAEKLLKDHGWNVTKDGITTCQQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
AGEGEGQCGKGIKQGAKLSFTVISQSGFTSTTHMFAELKSSFSNVGINLEIREVPDSVAE
CCCCCCCCCHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHH
SQACKPNDTNCKWDLSFFGSQSSWYYPVYASGERLFQSGGPVNLGSYSDKKADELIDASM
HCCCCCCCCCCEEEEEEECCCCCEEEEEEECCHHHHHCCCCEECCCCCCHHHHHHHHHHH
RSNDRTALKTYNAYLAEDLPVLWMPNPVNRVSAWKSNIQGIDPQDPMLYLYPQDWTIR
CCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA