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The map label for this gene is amyD [H]

Identifier: 50843503

GI number: 50843503

Start: 2238189

End: 2239091

Strand: Direct

Name: amyD [H]

Synonym: PPA2059

Alternate gene names: 50843503

Gene position: 2238189-2239091 (Clockwise)

Preceding gene: 50843502

Following gene: 50843504

Centisome position: 87.42

GC content: 59.14

Gene sequence:

>903_bases
ATGTCCTCGATGGAAGCCGCACCGCGACACGGCAGTGCAAACCAGTCGCATCCCTGGGGATTCGTTGTACCCGCGTTCGC
CGTGCTCGCGGTGTTCTTCCTCACGCCAACGATCTACAACTTCATCTACGCCTTCACCGACTGGTCGAGCTTCAAAACGG
CCATCAATCCGGTGGGATGGAGCAATTTCTCCGATCTCATCGCATCAGGAAGCCTGCGGAAATCCTTGACTATCACCCTT
ATTTACGCGGCTGGCGTGGCCACGCTGCAGAATCTGTTCGGACTGATGCTGGCCGTACTGTTGGAGCGCGACACCCTCGT
CAACAAGATCGTCCGGGTGATCTTTTTTATCCCTGTGATCCTCTCGGCGCTAGCGACTGGTTACATCTTCCAAGCGTTGC
TGCGCCCCGACGGCGGGCTCAACCAAATGCTCGGAATATTCACGGGATCTCCGGTAAAAGTCTCCTGGCTGGGATCGACG
ACGTGGACTCTGCTCGTGTGCATTGTCATTCACTCGTGGAAGTGGATGGGCATGTCGATGCTCGTGTACCTGGCCGGGCT
TAAGACGATCGATGCCCAAGTGCTCGAGGCGGCACGCATCGACGGGGCGTCACGGTGGGCGACCTTCCACCAGATCCGCT
TGCCTCTCATCGCCCCAGCGGTGACGTTCAACGTCGCCACCGCCTTGCTGGGGTCGATGAACTCCTTCGATATCGTCCAG
GCGACTACGGGCGGAGGCCCCGGCGGCTCCACCGAACTGCTTAACCTCTTCATCTTCCGAACTTTCGGCCAGGGCCTCTA
CGCTCAGGCGACGACGATGAGCCTGGTGCTCTTCGTGGCCGTCGTCATCTTGGCATTCCCCGTGATCGGGATGCTTCGTC
GCCGTGAGGGAAGGATGTCATGA

Upstream 100 bases:

>100_bases
TGATCGCTGGCACGAAGACTCCAGCACAGGTGGGCTCAGAGACTCAGTCTCAGTTCGCCCAGCTCGCCAAGGCGATTGGC
GCGAAAGGGTTCTGATCCAT

Downstream 100 bases:

>100_bases
CCAAACGCATCATTCAGCCAATTGGCGCGGTACTGCTAGCCGTGCTCGTCGTCGGGATACCCCTGTGGACGGTCGTCGTC
ACTGCAGGGAAGTCCCAGGC

Product: binding-protein-dependent transport system permease

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSSMEAAPRHGSANQSHPWGFVVPAFAVLAVFFLTPTIYNFIYAFTDWSSFKTAINPVGWSNFSDLIASGSLRKSLTITL
IYAAGVATLQNLFGLMLAVLLERDTLVNKIVRVIFFIPVILSALATGYIFQALLRPDGGLNQMLGIFTGSPVKVSWLGST
TWTLLVCIVIHSWKWMGMSMLVYLAGLKTIDAQVLEAARIDGASRWATFHQIRLPLIAPAVTFNVATALLGSMNSFDIVQ
ATTGGGPGGSTELLNLFIFRTFGQGLYAQATTMSLVLFVAVVILAFPVIGMLRRREGRMS

Sequences:

>Translated_300_residues
MSSMEAAPRHGSANQSHPWGFVVPAFAVLAVFFLTPTIYNFIYAFTDWSSFKTAINPVGWSNFSDLIASGSLRKSLTITL
IYAAGVATLQNLFGLMLAVLLERDTLVNKIVRVIFFIPVILSALATGYIFQALLRPDGGLNQMLGIFTGSPVKVSWLGST
TWTLLVCIVIHSWKWMGMSMLVYLAGLKTIDAQVLEAARIDGASRWATFHQIRLPLIAPAVTFNVATALLGSMNSFDIVQ
ATTGGGPGGSTELLNLFIFRTFGQGLYAQATTMSLVLFVAVVILAFPVIGMLRRREGRMS
>Mature_299_residues
SSMEAAPRHGSANQSHPWGFVVPAFAVLAVFFLTPTIYNFIYAFTDWSSFKTAINPVGWSNFSDLIASGSLRKSLTITLI
YAAGVATLQNLFGLMLAVLLERDTLVNKIVRVIFFIPVILSALATGYIFQALLRPDGGLNQMLGIFTGSPVKVSWLGSTT
WTLLVCIVIHSWKWMGMSMLVYLAGLKTIDAQVLEAARIDGASRWATFHQIRLPLIAPAVTFNVATALLGSMNSFDIVQA
TTGGGPGGSTELLNLFIFRTFGQGLYAQATTMSLVLFVAVVILAFPVIGMLRRREGRMS

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790465, Length=274, Percent_Identity=26.6423357664234, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=23.8461538461538, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1789861, Length=272, Percent_Identity=25.7352941176471, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32609; Mature: 32478

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSMEAAPRHGSANQSHPWGFVVPAFAVLAVFFLTPTIYNFIYAFTDWSSFKTAINPVGW
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
SNFSDLIASGSLRKSLTITLIYAAGVATLQNLFGLMLAVLLERDTLVNKIVRVIFFIPVI
CCHHHHHHCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSALATGYIFQALLRPDGGLNQMLGIFTGSPVKVSWLGSTTWTLLVCIVIHSWKWMGMSM
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
LVYLAGLKTIDAQVLEAARIDGASRWATFHQIRLPLIAPAVTFNVATALLGSMNSFDIVQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
ATTGGGPGGSTELLNLFIFRTFGQGLYAQATTMSLVLFVAVVILAFPVIGMLRRREGRMS
EECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSMEAAPRHGSANQSHPWGFVVPAFAVLAVFFLTPTIYNFIYAFTDWSSFKTAINPVGW
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
SNFSDLIASGSLRKSLTITLIYAAGVATLQNLFGLMLAVLLERDTLVNKIVRVIFFIPVI
CCHHHHHHCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSALATGYIFQALLRPDGGLNQMLGIFTGSPVKVSWLGSTTWTLLVCIVIHSWKWMGMSM
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
LVYLAGLKTIDAQVLEAARIDGASRWATFHQIRLPLIAPAVTFNVATALLGSMNSFDIVQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
ATTGGGPGGSTELLNLFIFRTFGQGLYAQATTMSLVLFVAVVILAFPVIGMLRRREGRMS
EECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]