| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843500
Identifier: 50843500
GI number: 50843500
Start: 2233261
End: 2234598
Strand: Reverse
Name: 50843500
Synonym: PPA2056
Alternate gene names: NA
Gene position: 2234598-2233261 (Counterclockwise)
Preceding gene: 50843505
Following gene: 50843499
Centisome position: 87.28
GC content: 64.2
Gene sequence:
>1338_bases ATGACACTGATCACACGTAGATCAGTCCTCGGAGCTGCCGTTCTCACGGCGGCCGTTCCGGTGGTTGCCGACCACGATCG GGCTATCGCCGCCGATGCCGATATCGACCTTGCTGGCTGGACCCTCCTGGGTGTTGGAGACGAATTCACCGATCCGACTC ACAGCTCGGCCCAGTGGCATCGCGGCCTGTGGTACCCACACTCGGGAAGTGGCCTCTTTCGAGACGCGAATGTGTCTTTC TCAGGCGGGCAACTCCATTTGGCTGCTCGTGCCGAGCAGGTCGATAGTTTTTCCTACACGTTTGGCGCCGTTGAGTCAGT CTTTGACGTGCCGGGTCTGTGCACCTACGTCGAGGTGCGTGCCAAGGCGTTGCCCTCGGCCGCCCGGGTGCTGTCGGCCA TCTGGATGCAGTCGTCCGCCCTCGACGGTGGCCCTTCCTTGCTTACCGGCGCCGAGCCAAACCCGGAGCTTGACGTCGAG GAGACTTTTGACTACACGAAGATGAACATCGCGACCCACGTGTGGCCCGATAACACAGAGGTCACGCACCGGCGCTTCGG AGGCCACGCCTACCCGGTTGGCGTCGACATTTCGCGGGACTACCACACGTATGGCGTCGAACGCCGCGACGGTCAACTCC GATTTTATTTCGACCGACACCTGGCCTGGGAAACAAAACCCGGCGACCCTTCGCTGTGGCGGATGTCGCGGCATATGGTG CTCAGTCTTGAGGGACACCTGGGGGCCCCAGTCGTCCATCGACTCCCGGCGAGTTTTGACATCGACTACGTGCGCGCTTG GTACGCCCCCAACCCGGCACTGGAGCCCGGCGACTACCGGCTGACTAGCGCGGACGGGCGATTCTTGGCATTTCACGACG GTGTCCCTACCCTGCAGGCGCAGCCTCAGACTTGGTGTGTGGTTCGGCACGACGATTGCACTTACAGCCTTTCGACTCCT GGCGGCGCGGTCCTTGGTCTCGACGCCGAGGTTGGGAAGCACGAGGTCGTCGTCGGGTCCGGTCGTCGGACGACGTCGGA TACTGAGGGCAGCCTCAACCGCTGGCACCTGCTTGCAAACGGGGCGGGGCGTACCCTGCACTCAAAGTTCACCGGCCTGC CGATCGTCGTAGCTGACAGCCGGGTGGTCGAGGGCTCGGATTTGGCCACGGCAGCGGTCTGGACGCTCACCACGACGATC CCCTCGCCTCTTCCCGGCCCATCGGCGACGTCGATTCCCGTTCCGTCCACCCCGGCTCGCTCCACCTCAGCAGCCGCGGA TGCGGCCCCGTCGCGCCCTGGTCTTCCGCGGACGCCCTTGCCGAGGACAGGGGTGTGA
Upstream 100 bases:
>100_bases CATGAAAGGCCGTTTTCACGCGCTCGTGGTGACCGCAGTCATTCGTCGTAGGCTGCATGGAACCCCAGTTAGGGAGTGAC GTTGTTGCAAAGGAGCACAC
Downstream 100 bases:
>100_bases ACCCGGTATCGTCCGGTGCATGGAACGTGACCCGGCCATGGTGAGGCGGCCCTGGTGGCCTCCGCGGTTGGCTGACGTCG CCGAGCGCTCCGGCGTCTCG
Product: beta-glucanase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MTLITRRSVLGAAVLTAAVPVVADHDRAIAADADIDLAGWTLLGVGDEFTDPTHSSAQWHRGLWYPHSGSGLFRDANVSF SGGQLHLAARAEQVDSFSYTFGAVESVFDVPGLCTYVEVRAKALPSAARVLSAIWMQSSALDGGPSLLTGAEPNPELDVE ETFDYTKMNIATHVWPDNTEVTHRRFGGHAYPVGVDISRDYHTYGVERRDGQLRFYFDRHLAWETKPGDPSLWRMSRHMV LSLEGHLGAPVVHRLPASFDIDYVRAWYAPNPALEPGDYRLTSADGRFLAFHDGVPTLQAQPQTWCVVRHDDCTYSLSTP GGAVLGLDAEVGKHEVVVGSGRRTTSDTEGSLNRWHLLANGAGRTLHSKFTGLPIVVADSRVVEGSDLATAAVWTLTTTI PSPLPGPSATSIPVPSTPARSTSAAADAAPSRPGLPRTPLPRTGV
Sequences:
>Translated_445_residues MTLITRRSVLGAAVLTAAVPVVADHDRAIAADADIDLAGWTLLGVGDEFTDPTHSSAQWHRGLWYPHSGSGLFRDANVSF SGGQLHLAARAEQVDSFSYTFGAVESVFDVPGLCTYVEVRAKALPSAARVLSAIWMQSSALDGGPSLLTGAEPNPELDVE ETFDYTKMNIATHVWPDNTEVTHRRFGGHAYPVGVDISRDYHTYGVERRDGQLRFYFDRHLAWETKPGDPSLWRMSRHMV LSLEGHLGAPVVHRLPASFDIDYVRAWYAPNPALEPGDYRLTSADGRFLAFHDGVPTLQAQPQTWCVVRHDDCTYSLSTP GGAVLGLDAEVGKHEVVVGSGRRTTSDTEGSLNRWHLLANGAGRTLHSKFTGLPIVVADSRVVEGSDLATAAVWTLTTTI PSPLPGPSATSIPVPSTPARSTSAAADAAPSRPGLPRTPLPRTGV >Mature_444_residues TLITRRSVLGAAVLTAAVPVVADHDRAIAADADIDLAGWTLLGVGDEFTDPTHSSAQWHRGLWYPHSGSGLFRDANVSFS GGQLHLAARAEQVDSFSYTFGAVESVFDVPGLCTYVEVRAKALPSAARVLSAIWMQSSALDGGPSLLTGAEPNPELDVEE TFDYTKMNIATHVWPDNTEVTHRRFGGHAYPVGVDISRDYHTYGVERRDGQLRFYFDRHLAWETKPGDPSLWRMSRHMVL SLEGHLGAPVVHRLPASFDIDYVRAWYAPNPALEPGDYRLTSADGRFLAFHDGVPTLQAQPQTWCVVRHDDCTYSLSTPG GAVLGLDAEVGKHEVVVGSGRRTTSDTEGSLNRWHLLANGAGRTLHSKFTGLPIVVADSRVVEGSDLATAAVWTLTTTIP SPLPGPSATSIPVPSTPARSTSAAADAAPSRPGLPRTPLPRTGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47913; Mature: 47782
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLITRRSVLGAAVLTAAVPVVADHDRAIAADADIDLAGWTLLGVGDEFTDPTHSSAQWH CCEEECHHHHHHHHHHHHCCEEECCCCEEEECCCCEECCEEEEECCCCCCCCCCCCCHHH RGLWYPHSGSGLFRDANVSFSGGQLHLAARAEQVDSFSYTFGAVESVFDVPGLCTYVEVR CCCCCCCCCCCCEEECCEEECCCEEEEEECHHHHCCCEEHHHHHHHHHCCCCCCHHHHHH AKALPSAARVLSAIWMQSSALDGGPSLLTGAEPNPELDVEETFDYTKMNIATHVWPDNTE HHHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHCCCEEEEEEEEEECCCCCC VTHRRFGGHAYPVGVDISRDYHTYGVERRDGQLRFYFDRHLAWETKPGDPSLWRMSRHMV CHHHHCCCEEEEEEEECCCCCEECCCEECCCCEEEEEEEEEEEECCCCCCHHHEECCEEE LSLEGHLGAPVVHRLPASFDIDYVRAWYAPNPALEPGDYRLTSADGRFLAFHDGVPTLQA EEECCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCCCC QPQTWCVVRHDDCTYSLSTPGGAVLGLDAEVGKHEVVVGSGRRTTSDTEGSLNRWHLLAN CCCEEEEEEECCCEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEC GAGRTLHSKFTGLPIVVADSRVVEGSDLATAAVWTLTTTIPSPLPGPSATSIPVPSTPAR CCCCEEHHHHCCCEEEEECCEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC STSAAADAAPSRPGLPRTPLPRTGV CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLITRRSVLGAAVLTAAVPVVADHDRAIAADADIDLAGWTLLGVGDEFTDPTHSSAQWH CEEECHHHHHHHHHHHHCCEEECCCCEEEECCCCEECCEEEEECCCCCCCCCCCCCHHH RGLWYPHSGSGLFRDANVSFSGGQLHLAARAEQVDSFSYTFGAVESVFDVPGLCTYVEVR CCCCCCCCCCCCEEECCEEECCCEEEEEECHHHHCCCEEHHHHHHHHHCCCCCCHHHHHH AKALPSAARVLSAIWMQSSALDGGPSLLTGAEPNPELDVEETFDYTKMNIATHVWPDNTE HHHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHCCCEEEEEEEEEECCCCCC VTHRRFGGHAYPVGVDISRDYHTYGVERRDGQLRFYFDRHLAWETKPGDPSLWRMSRHMV CHHHHCCCEEEEEEEECCCCCEECCCEECCCCEEEEEEEEEEEECCCCCCHHHEECCEEE LSLEGHLGAPVVHRLPASFDIDYVRAWYAPNPALEPGDYRLTSADGRFLAFHDGVPTLQA EEECCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCCCC QPQTWCVVRHDDCTYSLSTPGGAVLGLDAEVGKHEVVVGSGRRTTSDTEGSLNRWHLLAN CCCEEEEEEECCCEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEC GAGRTLHSKFTGLPIVVADSRVVEGSDLATAAVWTLTTTIPSPLPGPSATSIPVPSTPAR CCCCEEHHHHCCCEEEEECCEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC STSAAADAAPSRPGLPRTPLPRTGV CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA