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The map label for this gene is 50843505

Identifier: 50843505

GI number: 50843505

Start: 2239956

End: 2241476

Strand: Reverse

Name: 50843505

Synonym: PPA2061

Alternate gene names: NA

Gene position: 2241476-2239956 (Counterclockwise)

Preceding gene: 50843506

Following gene: 50843500

Centisome position: 87.55

GC content: 61.01

Gene sequence:

>1521_bases
ATGATACGTATAGCCATTTGTGGACTTCATATTGAATCGAGTACTTTCACCCCCTACATGAGCACGGCCGCTGACTTCAC
GCAGCGTCGCGGCCAGACACTGCTGGAGCGATACCCGTGGATCACCGAGTCCCCGATCCCCGGCATAGACCAGGTGCCCC
GGGCCATCGCAGGCGAGGAGTGGGATGTGCCGACAAAACGTCCGTGGAACCATGACGTTGAGTGGGTACCGATCCTGCAC
TGCTCAGCCCTGCCGGGAGGACCCGTGGAACGTCTGACCTACGAGAAGTGGCGCGCCGAAATCTGCGACGGCCTGGCGAA
GGCCGGTCATGTGGACGGGATCTTCTTCGACATTCACGGAGCCATGAGCGTGCCGGGCTACGACGACGTTGAGGGAGATC
TCATCAGCGCCATCCGCGACGTGGTTGGTCCCGAGCCAATGGTGAGTGCCTCGATGGACCTGCACGGAAACGTCTCTGAA
AAACTCTTCGCGGGCTGCGACCTGCTCACCTGCTATCGGATGGCACCGCACGAGGACGCGTGGGTGTCACGGGAGAGAGC
GGCTCGGACATTGTGCGAGCGACTGCGTTCCGGGAAGGGCAAACCGATCAAGGCGATGGTCACCGTGCCGATTCTGTTAC
CCGGTGAAAAGACGTCCACCAGGATCGAACCGGCGGCTTCGCTCTACGACATGGTGCCCGAGGTGGCGGCTCACGACGGT
GTTACCGATGTTGGGGTGTGGATCGGCTTTGCTTGGGCCGACCAGCCTCGATGCACGGCAGCCGTCGTCGGGTTCGGTGA
CGACGAGAACCACGTACGCGACGGGGTGAGCGAGATTGCACAGTTCTTCTGGAAGGTGCGTCGCGAATTCGTCTTCGTCG
CTCCCACCGATGGGATCGAACAAGCGGTAGACAGGGCGGTGGCGTCCTCGCGACGGCCGTTCGTTATTTCCGACTCGGGG
GACAATCCGGGCGCTGGCGGTGCTGATGACGTGACGATTGCGCTATCTGTATTGCTGGCCCATCCCGAGATCACTGGTGG
GGAGCTCTCCGCGATTCATGCTTCCATCTATGACCCACAGGTCGTGAAACGTGCTGACGAAGCGGGCGTCGGGGGCATGG
TTGAGGTGGATTTAGGGGGACATGTCGATACTCGCAAGCCTGGCCCTATCCACCTGAGTGCCCAGGTGCGCTGCCTAGTT
GACGATCCTGGCGGCCTGCGTACGGCAGTGCTGGGAATCGGGGGGCTTAGCGTCATCGTGACGACTCGGCGCGATCAGTA
CACGACCCTGGAACAGTTTGAGCGGGTACAACTGGACCCTCGGACGACCGACATAGTCGTGGTGAAGATCGGGTATCTCG
AGCCGGACCTTTACGACTTGGCCGCCGATTGGATCATGGCGCTCACCCCTGGCGGTGTGGACCAGGACCTTATGCGTCTG
GGCCATAACCATCTGCGTCGTCCGATCTTCCCCTTCGACGAAGACATGCAGGATCCAGACCTCACTGTCACTACCAGTTG
A

Upstream 100 bases:

>100_bases
ATCTCGTGATCGAGACCTCTGCTTGCGGAGCCGATGCCCCGCTCATCGGCATGTCGATACTTGACTCTCATATGCCCATC
TCACAGGAAGGCAATCGCTG

Downstream 100 bases:

>100_bases
GCGTTGTGGAGATTTCGCCAGTCCGATCGAAGGCCCCAGGCAGTAAGAAGGGTTACTTGACCGCACCCGAAGTAATGCCT
GAAATAATGCTGCGCTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: MlrC Domain-Containing Protein; MlrC Domain Protein; MlrC Family; Microcystin LR Degradation Protein MlrC; MlrC-Like; MlrC C-Terminus Family; MlrC Family Protein; Peptidase; MlrC C-Terminal Domain Family Protein; MlrC-Like Protein; Cytoplasmic Protein; Microcystin Lr Degradation Protein Mlrc-Like Protein; MlrC C-Terminus Family Protein; LOW QUALITY PROTEIN MlrC C-Terminus Superfamily Protein; Microcystin Lr Degradation Domain; MlrC C-Terminus Superfamily Protein

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MIRIAICGLHIESSTFTPYMSTAADFTQRRGQTLLERYPWITESPIPGIDQVPRAIAGEEWDVPTKRPWNHDVEWVPILH
CSALPGGPVERLTYEKWRAEICDGLAKAGHVDGIFFDIHGAMSVPGYDDVEGDLISAIRDVVGPEPMVSASMDLHGNVSE
KLFAGCDLLTCYRMAPHEDAWVSRERAARTLCERLRSGKGKPIKAMVTVPILLPGEKTSTRIEPAASLYDMVPEVAAHDG
VTDVGVWIGFAWADQPRCTAAVVGFGDDENHVRDGVSEIAQFFWKVRREFVFVAPTDGIEQAVDRAVASSRRPFVISDSG
DNPGAGGADDVTIALSVLLAHPEITGGELSAIHASIYDPQVVKRADEAGVGGMVEVDLGGHVDTRKPGPIHLSAQVRCLV
DDPGGLRTAVLGIGGLSVIVTTRRDQYTTLEQFERVQLDPRTTDIVVVKIGYLEPDLYDLAADWIMALTPGGVDQDLMRL
GHNHLRRPIFPFDEDMQDPDLTVTTS

Sequences:

>Translated_506_residues
MIRIAICGLHIESSTFTPYMSTAADFTQRRGQTLLERYPWITESPIPGIDQVPRAIAGEEWDVPTKRPWNHDVEWVPILH
CSALPGGPVERLTYEKWRAEICDGLAKAGHVDGIFFDIHGAMSVPGYDDVEGDLISAIRDVVGPEPMVSASMDLHGNVSE
KLFAGCDLLTCYRMAPHEDAWVSRERAARTLCERLRSGKGKPIKAMVTVPILLPGEKTSTRIEPAASLYDMVPEVAAHDG
VTDVGVWIGFAWADQPRCTAAVVGFGDDENHVRDGVSEIAQFFWKVRREFVFVAPTDGIEQAVDRAVASSRRPFVISDSG
DNPGAGGADDVTIALSVLLAHPEITGGELSAIHASIYDPQVVKRADEAGVGGMVEVDLGGHVDTRKPGPIHLSAQVRCLV
DDPGGLRTAVLGIGGLSVIVTTRRDQYTTLEQFERVQLDPRTTDIVVVKIGYLEPDLYDLAADWIMALTPGGVDQDLMRL
GHNHLRRPIFPFDEDMQDPDLTVTTS
>Mature_506_residues
MIRIAICGLHIESSTFTPYMSTAADFTQRRGQTLLERYPWITESPIPGIDQVPRAIAGEEWDVPTKRPWNHDVEWVPILH
CSALPGGPVERLTYEKWRAEICDGLAKAGHVDGIFFDIHGAMSVPGYDDVEGDLISAIRDVVGPEPMVSASMDLHGNVSE
KLFAGCDLLTCYRMAPHEDAWVSRERAARTLCERLRSGKGKPIKAMVTVPILLPGEKTSTRIEPAASLYDMVPEVAAHDG
VTDVGVWIGFAWADQPRCTAAVVGFGDDENHVRDGVSEIAQFFWKVRREFVFVAPTDGIEQAVDRAVASSRRPFVISDSG
DNPGAGGADDVTIALSVLLAHPEITGGELSAIHASIYDPQVVKRADEAGVGGMVEVDLGGHVDTRKPGPIHLSAQVRCLV
DDPGGLRTAVLGIGGLSVIVTTRRDQYTTLEQFERVQLDPRTTDIVVVKIGYLEPDLYDLAADWIMALTPGGVDQDLMRL
GHNHLRRPIFPFDEDMQDPDLTVTTS

Specific function: Unknown

COG id: COG5476

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55243; Mature: 55243

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIAICGLHIESSTFTPYMSTAADFTQRRGQTLLERYPWITESPIPGIDQVPRAIAGEE
CEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC
WDVPTKRPWNHDVEWVPILHCSALPGGPVERLTYEKWRAEICDGLAKAGHVDGIFFDIHG
CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
AMSVPGYDDVEGDLISAIRDVVGPEPMVSASMDLHGNVSEKLFAGCDLLTCYRMAPHEDA
CCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHCCCHHHHHHCCCCCHH
WVSRERAARTLCERLRSGKGKPIKAMVTVPILLPGEKTSTRIEPAASLYDMVPEVAAHDG
HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
VTDVGVWIGFAWADQPRCTAAVVGFGDDENHVRDGVSEIAQFFWKVRREFVFVAPTDGIE
CCEEHHEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHH
QAVDRAVASSRRPFVISDSGDNPGAGGADDVTIALSVLLAHPEITGGELSAIHASIYDPQ
HHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHEEEEHHCCHH
VVKRADEAGVGGMVEVDLGGHVDTRKPGPIHLSAQVRCLVDDPGGLRTAVLGIGGLSVIV
HHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEECCCEEEEE
TTRRDQYTTLEQFERVQLDPRTTDIVVVKIGYLEPDLYDLAADWIMALTPGGVDQDLMRL
EECCCCHHHHHHHHHEECCCCCCEEEEEEEECCCCHHHHHHHHHHHEECCCCCCHHHHHH
GHNHLRRPIFPFDEDMQDPDLTVTTS
HHHHHCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MIRIAICGLHIESSTFTPYMSTAADFTQRRGQTLLERYPWITESPIPGIDQVPRAIAGEE
CEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC
WDVPTKRPWNHDVEWVPILHCSALPGGPVERLTYEKWRAEICDGLAKAGHVDGIFFDIHG
CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
AMSVPGYDDVEGDLISAIRDVVGPEPMVSASMDLHGNVSEKLFAGCDLLTCYRMAPHEDA
CCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHCCCHHHHHHCCCCCHH
WVSRERAARTLCERLRSGKGKPIKAMVTVPILLPGEKTSTRIEPAASLYDMVPEVAAHDG
HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
VTDVGVWIGFAWADQPRCTAAVVGFGDDENHVRDGVSEIAQFFWKVRREFVFVAPTDGIE
CCEEHHEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHH
QAVDRAVASSRRPFVISDSGDNPGAGGADDVTIALSVLLAHPEITGGELSAIHASIYDPQ
HHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHEEEEHHCCHH
VVKRADEAGVGGMVEVDLGGHVDTRKPGPIHLSAQVRCLVDDPGGLRTAVLGIGGLSVIV
HHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEECCCEEEEE
TTRRDQYTTLEQFERVQLDPRTTDIVVVKIGYLEPDLYDLAADWIMALTPGGVDQDLMRL
EECCCCHHHHHHHHHEECCCCCCEEEEEEEECCCCHHHHHHHHHHHEECCCCCCHHHHHH
GHNHLRRPIFPFDEDMQDPDLTVTTS
HHHHHCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA