| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843480
Identifier: 50843480
GI number: 50843480
Start: 2210243
End: 2211100
Strand: Reverse
Name: 50843480
Synonym: PPA2036
Alternate gene names: NA
Gene position: 2211100-2210243 (Counterclockwise)
Preceding gene: 50843481
Following gene: 50843479
Centisome position: 86.36
GC content: 60.14
Gene sequence:
>858_bases GTGGGAATAGCGATCGGGTTGCGACCTTATACCCATGCCTTCGGGTCGGTGTTTCAGAATCGCTACAGGTCTAGCGCCGC GAGCGCGCCGGGCCCGGCAACGAGCGCGTTCTCTGCTGTCTCGTCGACGGTCACGCCGTTACAAGCTCCAACACCTGCGG CGTACGCAGCTGGGCAGGTGACAGAGCATGGCGGAACTTTGGCGACCCTCGGCCTGGGTGATTCGGTGCCGCAGGGCGGC ACATGTACCGGCTGCACGACGTTCATCGAGAGAGTCGGCACCGATATGGCACGTAAAGCCGGGGTGAAGGCTGCTGTGCA TAACGAGTCGGTATCGGGATACAAGACCGCTGACCTATTGACCCAGCTTGAGTCCAATAACGCGAAGGCTCTGCTGGCAA CGTCTGATCTAGCGATAGTGACGATCGGTGCGAACGACTTCGACCTCGACACAATGGTGGGTCAGTGTGCTCATTCTGAT ACGTCATGTATAGCTGATGATGTTAACGGTGTGACTGATCGAGTGCGGACGATCCTGGAACGCGTCAAGGCCGCGATGAA GACGCCGAGAGCGACTGTTGTCGTCACCGGGTATTGGGACGTGGGGCTGGACGGCAAGGCGGGCCGCGAGAACGGGCCCG ACTACGTCAAGGTGACCGATATGATCACCGAGGCCTTCAACGCCAACGTCAAGAAGATCGCCCACGAGGTCGGAGCGGTC TACGTCGACTTCCGTACCCCGTTTAGGGGAGCAGATGGCACGCGTGATGACACAGCACTGCTCACTGACGACGGGGATCA TCCATCCGAGCAAGGGCACAAGGTGCTAGCGGAGGCTGTCGAGGCCGCACTGTCCTGA
Upstream 100 bases:
>100_bases CCTGCTGCGAGAGGTATGCAGGTGAGGCTTGGTAAGGCAAGATGAGAGTATGAAGAGAATTCTTAAGATTCTCAGTGTTG TGGTCGCTGTGGTGATCGTG
Downstream 100 bases:
>100_bases TCGGCTGAAGTAGCGAGCAAACCGCAGGATGACGTATTAACCTCGGCATCAATAGCGTTGGCAGTTGGCAATGGGGTCGG CGCGCTCACAGAGGGGATCA
Product: lipase/acylhydrolase
Products: NA
Alternate protein names: GDSL-Like Protein
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MGIAIGLRPYTHAFGSVFQNRYRSSAASAPGPATSAFSAVSSTVTPLQAPTPAAYAAGQVTEHGGTLATLGLGDSVPQGG TCTGCTTFIERVGTDMARKAGVKAAVHNESVSGYKTADLLTQLESNNAKALLATSDLAIVTIGANDFDLDTMVGQCAHSD TSCIADDVNGVTDRVRTILERVKAAMKTPRATVVVTGYWDVGLDGKAGRENGPDYVKVTDMITEAFNANVKKIAHEVGAV YVDFRTPFRGADGTRDDTALLTDDGDHPSEQGHKVLAEAVEAALS
Sequences:
>Translated_285_residues MGIAIGLRPYTHAFGSVFQNRYRSSAASAPGPATSAFSAVSSTVTPLQAPTPAAYAAGQVTEHGGTLATLGLGDSVPQGG TCTGCTTFIERVGTDMARKAGVKAAVHNESVSGYKTADLLTQLESNNAKALLATSDLAIVTIGANDFDLDTMVGQCAHSD TSCIADDVNGVTDRVRTILERVKAAMKTPRATVVVTGYWDVGLDGKAGRENGPDYVKVTDMITEAFNANVKKIAHEVGAV YVDFRTPFRGADGTRDDTALLTDDGDHPSEQGHKVLAEAVEAALS >Mature_284_residues GIAIGLRPYTHAFGSVFQNRYRSSAASAPGPATSAFSAVSSTVTPLQAPTPAAYAAGQVTEHGGTLATLGLGDSVPQGGT CTGCTTFIERVGTDMARKAGVKAAVHNESVSGYKTADLLTQLESNNAKALLATSDLAIVTIGANDFDLDTMVGQCAHSDT SCIADDVNGVTDRVRTILERVKAAMKTPRATVVVTGYWDVGLDGKAGRENGPDYVKVTDMITEAFNANVKKIAHEVGAVY VDFRTPFRGADGTRDDTALLTDDGDHPSEQGHKVLAEAVEAALS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29623; Mature: 29492
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIAIGLRPYTHAFGSVFQNRYRSSAASAPGPATSAFSAVSSTVTPLQAPTPAAYAAGQV CCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCE TEHGGTLATLGLGDSVPQGGTCTGCTTFIERVGTDMARKAGVKAAVHNESVSGYKTADLL ECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCEEEECCCCCCCHHHHHHH TQLESNNAKALLATSDLAIVTIGANDFDLDTMVGQCAHSDTSCIADDVNGVTDRVRTILE HHHHCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RVKAAMKTPRATVVVTGYWDVGLDGKAGRENGPDYVKVTDMITEAFNANVKKIAHEVGAV HHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHCEE YVDFRTPFRGADGTRDDTALLTDDGDHPSEQGHKVLAEAVEAALS EEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure GIAIGLRPYTHAFGSVFQNRYRSSAASAPGPATSAFSAVSSTVTPLQAPTPAAYAAGQV CEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCE TEHGGTLATLGLGDSVPQGGTCTGCTTFIERVGTDMARKAGVKAAVHNESVSGYKTADLL ECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCEEEECCCCCCCHHHHHHH TQLESNNAKALLATSDLAIVTIGANDFDLDTMVGQCAHSDTSCIADDVNGVTDRVRTILE HHHHCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RVKAAMKTPRATVVVTGYWDVGLDGKAGRENGPDYVKVTDMITEAFNANVKKIAHEVGAV HHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHCEE YVDFRTPFRGADGTRDDTALLTDDGDHPSEQGHKVLAEAVEAALS EEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA