Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50843450

Identifier: 50843450

GI number: 50843450

Start: 2177147

End: 2177683

Strand: Direct

Name: 50843450

Synonym: PPA2004

Alternate gene names: NA

Gene position: 2177147-2177683 (Clockwise)

Preceding gene: 50843449

Following gene: 50843456

Centisome position: 85.04

GC content: 59.59

Gene sequence:

>537_bases
ATGCGATCCCCCCGCGCTGCCAGTCTGGCTGCCGCGCTGGTGATGTCACTGTCTGCTGGGGTCGTCGGCGTCGCGAACGC
AGAACCAACGGCTTCGCCCGAACCAAGACAGTCTTCGCCCGCTGTCGCTTCTCCAGCCACCCTGCCAATCTCGAATACCG
GTGCTCACCTAGACCGTCGCTGCATGAAGGGAACCGTTATCTGCGCCTCCAAGAAGCAGCGCAAGCTCTGGATGGTGCAC
AACGGGCGCATCCTCATCACCCTTGACGCCCGCTTCGGTCGGGCCAGTGAGCCCACTGCCGAGGGCGTCCATACCATCTA
CTGGAAAGATAAGAACCACGTCTCCAGTGTCTACGGCTCCCCGATGCCATACTCGATGTTCTTTTACAGGGGCCAGGCCA
TTCATTACTCTTCGGACTTCTCCCGTCGTGGCTGGAATGGGGCCTCCCATGGCTGCATCAACATCCGCAATATGTCTGGT
CTGAAGTGGCTGTGGAACCGCACTCCAACTGGCCGCAAGGTCATCGTATTCAAGTGA

Upstream 100 bases:

>100_bases
TGCCACCGCGGGCCCGGGGGGAGAGAGCAGAAACCAGGTCAAAAAATGCGAGCTACCAGGCGTAGCATTTTCATGTCCAC
GTCCCGAAAGGTTGTGATCA

Downstream 100 bases:

>100_bases
TGTGACGACGCATGGCCCGGCTCCCATCAGGGAAGCGGACCATCTCGTCTCCTAGGCCACGACCGACAATGTCACAGGGG
GGACTCGTAGCCCCTAGACA

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG Family Protein; Secreted Protein; ErfK/YbiS/YcfS/YnhG Superfamily Protein

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRSPRAASLAAALVMSLSAGVVGVANAEPTASPEPRQSSPAVASPATLPISNTGAHLDRRCMKGTVICASKKQRKLWMVH
NGRILITLDARFGRASEPTAEGVHTIYWKDKNHVSSVYGSPMPYSMFFYRGQAIHYSSDFSRRGWNGASHGCINIRNMSG
LKWLWNRTPTGRKVIVFK

Sequences:

>Translated_178_residues
MRSPRAASLAAALVMSLSAGVVGVANAEPTASPEPRQSSPAVASPATLPISNTGAHLDRRCMKGTVICASKKQRKLWMVH
NGRILITLDARFGRASEPTAEGVHTIYWKDKNHVSSVYGSPMPYSMFFYRGQAIHYSSDFSRRGWNGASHGCINIRNMSG
LKWLWNRTPTGRKVIVFK
>Mature_178_residues
MRSPRAASLAAALVMSLSAGVVGVANAEPTASPEPRQSSPAVASPATLPISNTGAHLDRRCMKGTVICASKKQRKLWMVH
NGRILITLDARFGRASEPTAEGVHTIYWKDKNHVSSVYGSPMPYSMFFYRGQAIHYSSDFSRRGWNGASHGCINIRNMSG
LKWLWNRTPTGRKVIVFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19531; Mature: 19531

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPRAASLAAALVMSLSAGVVGVANAEPTASPEPRQSSPAVASPATLPISNTGAHLDRR
CCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHH
CMKGTVICASKKQRKLWMVHNGRILITLDARFGRASEPTAEGVHTIYWKDKNHVSSVYGS
HHCCEEEEECCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHCCC
PMPYSMFFYRGQAIHYSSDFSRRGWNGASHGCINIRNMSGLKWLWNRTPTGRKVIVFK
CCCEEEEEEECCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCEEEEEC
>Mature Secondary Structure
MRSPRAASLAAALVMSLSAGVVGVANAEPTASPEPRQSSPAVASPATLPISNTGAHLDRR
CCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHH
CMKGTVICASKKQRKLWMVHNGRILITLDARFGRASEPTAEGVHTIYWKDKNHVSSVYGS
HHCCEEEEECCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHCCC
PMPYSMFFYRGQAIHYSSDFSRRGWNGASHGCINIRNMSGLKWLWNRTPTGRKVIVFK
CCCEEEEEEECCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA