| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843448
Identifier: 50843448
GI number: 50843448
Start: 2174186
End: 2174713
Strand: Reverse
Name: 50843448
Synonym: PPA2002
Alternate gene names: NA
Gene position: 2174713-2174186 (Counterclockwise)
Preceding gene: 50843451
Following gene: 50843447
Centisome position: 84.94
GC content: 60.61
Gene sequence:
>528_bases ATGGCTGAGGAGCAAAACACCGATCTGACCACTGAGATCGAGGGACAGGATCACGGCGTGCGGTTGCCGCCCGACCCGGC CATTCGCAAACTTGCTAAGCGTGGACGTGGGGAGTTCATGACGGTCGTCAAGGAGCACCCTTCCTCATCCCTGTGCTGGG CCCTCCTGGCTGAAGGGTCGCTGTTGAGCGATACAGATGCCGCTGATGTCGCCGCGTACGCCTATGCCCGTACGGGTCGT GACCTTGGCCTTGAGCAGCTCCGGGACGCTGGGTGGGACGGCGAAGGGCCAGTGGATTGGGGCTATCTGCCTAACCAAGG TGTGTTTCGTTGCCTCCATGCGTTGGCCATGGCGGCCGAGCGGCTTGGATTTGGGGATGAGTCCGACGATGCCGACACCC TTTTGCGGGAGTTGAGCAACGAGGCCTGGCAGGCATTGCGTGGAGATGATGTGCCGTCTGATAATGCTGTAGACGTCGAC GTGGATGAAGAGCTCGCTGATGAGCAGGAGTCCGATCATCAGGAGTGA
Upstream 100 bases:
>100_bases GGTGATAATCCTCTCCTTGGCTGAAACAAGTTTATTGTCGTAGGGCTTTATTGGCGGCCCGAATAAGCGCCGCGGCGCAT TTCGCCCTAGGCTTGGGATC
Downstream 100 bases:
>100_bases TGGGGTTATCGTCACGTAGACGTCGGCAGGTTGACAACATGATTCTGGTGATTCATCCTTGAGATAGGACATCCAAGGTC CAATGTAATGCGACGGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MAEEQNTDLTTEIEGQDHGVRLPPDPAIRKLAKRGRGEFMTVVKEHPSSSLCWALLAEGSLLSDTDAADVAAYAYARTGR DLGLEQLRDAGWDGEGPVDWGYLPNQGVFRCLHALAMAAERLGFGDESDDADTLLRELSNEAWQALRGDDVPSDNAVDVD VDEELADEQESDHQE
Sequences:
>Translated_175_residues MAEEQNTDLTTEIEGQDHGVRLPPDPAIRKLAKRGRGEFMTVVKEHPSSSLCWALLAEGSLLSDTDAADVAAYAYARTGR DLGLEQLRDAGWDGEGPVDWGYLPNQGVFRCLHALAMAAERLGFGDESDDADTLLRELSNEAWQALRGDDVPSDNAVDVD VDEELADEQESDHQE >Mature_174_residues AEEQNTDLTTEIEGQDHGVRLPPDPAIRKLAKRGRGEFMTVVKEHPSSSLCWALLAEGSLLSDTDAADVAAYAYARTGRD LGLEQLRDAGWDGEGPVDWGYLPNQGVFRCLHALAMAAERLGFGDESDDADTLLRELSNEAWQALRGDDVPSDNAVDVDV DEELADEQESDHQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19155; Mature: 19024
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEQNTDLTTEIEGQDHGVRLPPDPAIRKLAKRGRGEFMTVVKEHPSSSLCWALLAEGS CCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHCCC LLSDTDAADVAAYAYARTGRDLGLEQLRDAGWDGEGPVDWGYLPNQGVFRCLHALAMAAE CCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RLGFGDESDDADTLLRELSNEAWQALRGDDVPSDNAVDVDVDEELADEQESDHQE HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHCCCCC >Mature Secondary Structure AEEQNTDLTTEIEGQDHGVRLPPDPAIRKLAKRGRGEFMTVVKEHPSSSLCWALLAEGS CCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHCCC LLSDTDAADVAAYAYARTGRDLGLEQLRDAGWDGEGPVDWGYLPNQGVFRCLHALAMAAE CCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RLGFGDESDDADTLLRELSNEAWQALRGDDVPSDNAVDVDVDEELADEQESDHQE HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA