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The map label for this gene is ydhO [C]

Identifier: 50843410

GI number: 50843410

Start: 2125018

End: 2126265

Strand: Direct

Name: ydhO [C]

Synonym: PPA1962

Alternate gene names: 50843410

Gene position: 2125018-2126265 (Clockwise)

Preceding gene: 50843409

Following gene: 50843423

Centisome position: 83.0

GC content: 64.1

Gene sequence:

>1248_bases
TTGGGTCGGTGGACGGATCCGGGGAAGAGCCAGGAGTGCCCCATAGGGAGGCGGGTCCACACGCCGGAAGGAGTCAGTTC
CATGGGTGTTGTGCGCCCGCTCCGGGCCGGGGTCGCAACCCTGGCCACCGCTGGTCTCGCCATCGGCGGCAGTCAATTCT
TTGCCCCCCCAGCCCAAGCCACCAACAGTTCAGTAAAGGCCCGAGTGTCCGCTCGCACCGCCGTTAACATCAGGGCCCAG
GCGGGCATACACGGAAAGATCGTAGGCGTACTCGAGAGGGGCCAGCAGCTCAATCAGACCGGCGTCCCCGTCAATGGCTG
GGTCCCGGTCGCCTACCGTGGCCACACTGCCTTCATCGACCACCACTACCTGTCGTCAGTCGCCTGGCGCCCATCTCCCT
CCAGCCCCTCCGCCTCCAGCTCTCCAGTCGGAATTGCCCAGGCAACCACGTACGTCTATGTTCGCGCTGGGCACTCTATG
CAGGCCGCCAAGGTGGGTGTGCTCTCCCCCGGTGAGAAAGTCGGCGTAACCGGACGCTCCGCACAGGGCTTTAGCGAAGT
TGTCTACAACGGCGTTCACCGGTGGGTTGGTTCCCGCTATCTGAGCCCCACCGCCGCCAAGCCCTCCCCGAAACCGGCGC
CGGCTCCCAAGCCATCCAAGACCGTCTACACGACAGCTAACCTCAACCTACGAAACGGCGCCTCCATGAGCGCTGCGGTG
TACACCTCAGTCTCACGTGGCACCGCCCTGGCAACCACCGGGCGGACTACCTCCGGATGGACCCAGATCACCCATCGGGG
ACGCACCTTGTGGGCCTCCAGCAAGTACCTCACCACTACTACTCCGCCCACACCGGCACCCAGGCCCGCCCCCGATCCCT
CGGTGTCGCCTCGTGGCGCTCGGGCCGCCATTGTCAACTACGCCACGGCTCAAGTGGGCAAAGCCTACATTTGGGGAGGC
GAGGGCCCCGACGGCTTCGACTGCTCGGGCCTAGTGTTGAAGGCCTACCAGCAGGCGGGAATTAACCTGCCCCATTACTC
GGGGTCACAAATCGAGCGCGGTCATCGCATTTCCCTAGACCAAATTCAGCCCGGGGATCTTTTCGCCGCCTCGGGTGGCG
GTCACGTCGGCATTTACGTCGGCAACGGGTACATGGTGGAGGCAGCCAATCCTCGTGCCGGGGTGCGTCTGAGCCCCATC
CGTTCCTCGATGTACCCAGTTCGCATCAATTCAAACCTCCTCAACTGA

Upstream 100 bases:

>100_bases
TCGGCGTGTCGACTTGCAGGCGACGAAAAACTCTTCGGAGCAAGTAGACGAAACCCGTTTTGACAACTTGAATTGCCCTT
GTCACGCGAGGTGTTCCTGG

Downstream 100 bases:

>100_bases
ACCAGCGTGACGCCGGCAATCCCTATCGGTTGCCGGCGTCTGCGGTGCCACCAAGGTAGGCACGCTGGTAAGCGCTCGTC
TGCCCAGAAGGCCAGCATCC

Product: putative cell wall-associated hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MGRWTDPGKSQECPIGRRVHTPEGVSSMGVVRPLRAGVATLATAGLAIGGSQFFAPPAQATNSSVKARVSARTAVNIRAQ
AGIHGKIVGVLERGQQLNQTGVPVNGWVPVAYRGHTAFIDHHYLSSVAWRPSPSSPSASSSPVGIAQATTYVYVRAGHSM
QAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAV
YTSVSRGTALATTGRTTSGWTQITHRGRTLWASSKYLTTTTPPTPAPRPAPDPSVSPRGARAAIVNYATAQVGKAYIWGG
EGPDGFDCSGLVLKAYQQAGINLPHYSGSQIERGHRISLDQIQPGDLFAASGGGHVGIYVGNGYMVEAANPRAGVRLSPI
RSSMYPVRINSNLLN

Sequences:

>Translated_415_residues
MGRWTDPGKSQECPIGRRVHTPEGVSSMGVVRPLRAGVATLATAGLAIGGSQFFAPPAQATNSSVKARVSARTAVNIRAQ
AGIHGKIVGVLERGQQLNQTGVPVNGWVPVAYRGHTAFIDHHYLSSVAWRPSPSSPSASSSPVGIAQATTYVYVRAGHSM
QAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAV
YTSVSRGTALATTGRTTSGWTQITHRGRTLWASSKYLTTTTPPTPAPRPAPDPSVSPRGARAAIVNYATAQVGKAYIWGG
EGPDGFDCSGLVLKAYQQAGINLPHYSGSQIERGHRISLDQIQPGDLFAASGGGHVGIYVGNGYMVEAANPRAGVRLSPI
RSSMYPVRINSNLLN
>Mature_414_residues
GRWTDPGKSQECPIGRRVHTPEGVSSMGVVRPLRAGVATLATAGLAIGGSQFFAPPAQATNSSVKARVSARTAVNIRAQA
GIHGKIVGVLERGQQLNQTGVPVNGWVPVAYRGHTAFIDHHYLSSVAWRPSPSSPSASSSPVGIAQATTYVYVRAGHSMQ
AAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVY
TSVSRGTALATTGRTTSGWTQITHRGRTLWASSKYLTTTTPPTPAPRPAPDPSVSPRGARAAIVNYATAQVGKAYIWGGE
GPDGFDCSGLVLKAYQQAGINLPHYSGSQIERGHRISLDQIQPGDLFAASGGGHVGIYVGNGYMVEAANPRAGVRLSPIR
SSMYPVRINSNLLN

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 43394; Mature: 43263

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRWTDPGKSQECPIGRRVHTPEGVSSMGVVRPLRAGVATLATAGLAIGGSQFFAPPAQA
CCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHH
TNSSVKARVSARTAVNIRAQAGIHGKIVGVLERGQQLNQTGVPVNGWVPVAYRGHTAFID
CCCCEEEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEE
HHYLSSVAWRPSPSSPSASSSPVGIAQATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRS
HHHHHHEECCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCEECCCCCC
AQGFSEVVYNGVHRWVGSRYLSPTAAKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEE
YTSVSRGTALATTGRTTSGWTQITHRGRTLWASSKYLTTTTPPTPAPRPAPDPSVSPRGA
EEECCCCEEEEECCCCCCCHHHHHHCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC
RAAIVNYATAQVGKAYIWGGEGPDGFDCSGLVLKAYQQAGINLPHYSGSQIERGHRISLD
EEEEEEHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEC
QIQPGDLFAASGGGHVGIYVGNGYMVEAANPRAGVRLSPIRSSMYPVRINSNLLN
CCCCCCEEEECCCCEEEEEECCCEEEEECCCCCCCEECCHHCCEEEEEECCCCCC
>Mature Secondary Structure 
GRWTDPGKSQECPIGRRVHTPEGVSSMGVVRPLRAGVATLATAGLAIGGSQFFAPPAQA
CCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHH
TNSSVKARVSARTAVNIRAQAGIHGKIVGVLERGQQLNQTGVPVNGWVPVAYRGHTAFID
CCCCEEEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEE
HHYLSSVAWRPSPSSPSASSSPVGIAQATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRS
HHHHHHEECCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCEECCCCCC
AQGFSEVVYNGVHRWVGSRYLSPTAAKPSPKPAPAPKPSKTVYTTANLNLRNGASMSAAV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEE
YTSVSRGTALATTGRTTSGWTQITHRGRTLWASSKYLTTTTPPTPAPRPAPDPSVSPRGA
EEECCCCEEEEECCCCCCCHHHHHHCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC
RAAIVNYATAQVGKAYIWGGEGPDGFDCSGLVLKAYQQAGINLPHYSGSQIERGHRISLD
EEEEEEHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEC
QIQPGDLFAASGGGHVGIYVGNGYMVEAANPRAGVRLSPIRSSMYPVRINSNLLN
CCCCCCEEEECCCCEEEEEECCCEEEEECCCCCCCEECCHHCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]