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The map label for this gene is 50843402

Identifier: 50843402

GI number: 50843402

Start: 2113770

End: 2115272

Strand: Direct

Name: 50843402

Synonym: PPA1953

Alternate gene names: NA

Gene position: 2113770-2115272 (Clockwise)

Preceding gene: 50843401

Following gene: 50843406

Centisome position: 82.56

GC content: 60.08

Gene sequence:

>1503_bases
ATGGAACTCCCCTCGTGGCTCGGTATCCCTACCCTCGCATTCGGATTGGGGAGCCGAACCCCCCAGCAGGGTCTAGTCCT
TGCTGGGGGAGGGTCCAGAGCCTCCTTCCAGATGGGTGCGCTGCGGCACCTTTATGACGTCGTCGGGATTACCCCCACCT
CGATGGTGGCCACTTCGGCCGGGTCAATTGTGGCCTGTACCCTGGCTCAATGGACCGATCCAGCCAAGCAATCGGCGGCA
CTGCGTCAGCTAGAGGCGATGTGGCTCGAGATGACCGATCAGTCCGACATGTTCACGCCGCGGGCATGGTTTTCTCGGTT
GCTCGAAATAGGCCCGGAATGGATGTCGTTGCTCAACCGGGAAGCCGCTAAAACAAAGAGCCAACGTCCCTGGCTGAGCT
TGCCATTTCATCGCGGCCCGGAGCAGACGAAAGTCCCTGACCCCGCAGAACCTGTTGCCGGCCGTGACGACGACCGCCTC
ACCGGTCAGGCAAGGACCTTGGAAATCGCCACTCGTGACGACCCCATTACAGGTGGTTCCTGGACCCCAGGTGTCATCTT
GCAGTTGCTATCAGCCCTGTCCCGATTAAGTCGCGACGGCGGTGATATTTCGACGATCGTGCGAGGGGCTGAGACCTCGG
CGTCAACCTATCGTGCCGGACCTATCTTGGCGAAACTGCTCGATCGTGGCTTCTTCAAATCCGAATTATTGGCAACCTCA
GGAATGTCGGTACGCATTGCCACAGTCGCCCTAGAATCCGGAGAGTTGCGATACATGACCGAGTCAGGAGTGCTCGTCGA
CCGTGACAACAACCCCATCGGCTCCTCAACCTTCGATGTCTCTCGCGGGGTACTCGCCTCCTGCTCCATTCCCGGGGTCT
TCCGTCCCGTTGACCTCGACGGAGAGCACTACGTCGACGGTGGTCTGCGGGAAAATGTGCCCGCCGAGATGGCAATCGGG
CACCTTGGTGTGACGAACCCTTACATCATCACGTGTTCGCCGCAGGGGACCGCACGAGAGTCCGATTTTGGCTCTCGCAA
CATGCTTGATCTAGTAATGAGAACGGTGTCGATCCTGACTGACGAGACCGAGCGAGACGAGGTAGCCTATGCCCTCAACG
CTGGCGCCGTCGTCATCGGTCCCGAGATTTCAGTACACGACTCGATGACGGTCGACCCTGGATTGCTGCGTATCAACCGC
GATTACGGCTGGATGTGCTCGGCAGAGAAGCACATCACGCCGGGCCCCGACGAGCACGAACTCATCAAGGATGCGGTACG
CACTCGAGTGCGCGGTTGGCAACTCGAACAGGCCTGGCTCAAAGAAGAAGCCTCCCGCGAGGACATGGACGAGATGCAAC
ACCTCAAGGACCACTTGCGTGACATCGCGGCCCGGCTGCCACGCGATCTAGCTCCTGACGGGGTTGAGACGTGGGGGCGG
GTTCTCGAAGGACATGGCCACCCGCAGGCACCCGAGGATGTCGTCATCCCCTGGCAGGTGTAA

Upstream 100 bases:

>100_bases
ACTGGGAGCAAGAGCACCTGGCCAGCACCATCAAGGCCATCCAAGAGACCGTCGAGGCGGCTTCCTGAGCGCGCTTCGAC
GAAGCTCGTAGGATTGAGCT

Downstream 100 bases:

>100_bases
AAGCCCCAGGAACGTCCGGATACGACACGACGGCGGCGAACGTCACGTTCACCGCCGTCGCAGCATTTCGTCGATGTTTC
AGATGAGCTCGTTGAGGTCG

Product: patatin-like phospholipase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MELPSWLGIPTLAFGLGSRTPQQGLVLAGGGSRASFQMGALRHLYDVVGITPTSMVATSAGSIVACTLAQWTDPAKQSAA
LRQLEAMWLEMTDQSDMFTPRAWFSRLLEIGPEWMSLLNREAAKTKSQRPWLSLPFHRGPEQTKVPDPAEPVAGRDDDRL
TGQARTLEIATRDDPITGGSWTPGVILQLLSALSRLSRDGGDISTIVRGAETSASTYRAGPILAKLLDRGFFKSELLATS
GMSVRIATVALESGELRYMTESGVLVDRDNNPIGSSTFDVSRGVLASCSIPGVFRPVDLDGEHYVDGGLRENVPAEMAIG
HLGVTNPYIITCSPQGTARESDFGSRNMLDLVMRTVSILTDETERDEVAYALNAGAVVIGPEISVHDSMTVDPGLLRINR
DYGWMCSAEKHITPGPDEHELIKDAVRTRVRGWQLEQAWLKEEASREDMDEMQHLKDHLRDIAARLPRDLAPDGVETWGR
VLEGHGHPQAPEDVVIPWQV

Sequences:

>Translated_500_residues
MELPSWLGIPTLAFGLGSRTPQQGLVLAGGGSRASFQMGALRHLYDVVGITPTSMVATSAGSIVACTLAQWTDPAKQSAA
LRQLEAMWLEMTDQSDMFTPRAWFSRLLEIGPEWMSLLNREAAKTKSQRPWLSLPFHRGPEQTKVPDPAEPVAGRDDDRL
TGQARTLEIATRDDPITGGSWTPGVILQLLSALSRLSRDGGDISTIVRGAETSASTYRAGPILAKLLDRGFFKSELLATS
GMSVRIATVALESGELRYMTESGVLVDRDNNPIGSSTFDVSRGVLASCSIPGVFRPVDLDGEHYVDGGLRENVPAEMAIG
HLGVTNPYIITCSPQGTARESDFGSRNMLDLVMRTVSILTDETERDEVAYALNAGAVVIGPEISVHDSMTVDPGLLRINR
DYGWMCSAEKHITPGPDEHELIKDAVRTRVRGWQLEQAWLKEEASREDMDEMQHLKDHLRDIAARLPRDLAPDGVETWGR
VLEGHGHPQAPEDVVIPWQV
>Mature_500_residues
MELPSWLGIPTLAFGLGSRTPQQGLVLAGGGSRASFQMGALRHLYDVVGITPTSMVATSAGSIVACTLAQWTDPAKQSAA
LRQLEAMWLEMTDQSDMFTPRAWFSRLLEIGPEWMSLLNREAAKTKSQRPWLSLPFHRGPEQTKVPDPAEPVAGRDDDRL
TGQARTLEIATRDDPITGGSWTPGVILQLLSALSRLSRDGGDISTIVRGAETSASTYRAGPILAKLLDRGFFKSELLATS
GMSVRIATVALESGELRYMTESGVLVDRDNNPIGSSTFDVSRGVLASCSIPGVFRPVDLDGEHYVDGGLRENVPAEMAIG
HLGVTNPYIITCSPQGTARESDFGSRNMLDLVMRTVSILTDETERDEVAYALNAGAVVIGPEISVHDSMTVDPGLLRINR
DYGWMCSAEKHITPGPDEHELIKDAVRTRVRGWQLEQAWLKEEASREDMDEMQHLKDHLRDIAARLPRDLAPDGVETWGR
VLEGHGHPQAPEDVVIPWQV

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54621; Mature: 54621

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELPSWLGIPTLAFGLGSRTPQQGLVLAGGGSRASFQMGALRHLYDVVGITPTSMVATSA
CCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC
GSIVACTLAQWTDPAKQSAALRQLEAMWLEMTDQSDMFTPRAWFSRLLEIGPEWMSLLNR
CCEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
EAAKTKSQRPWLSLPFHRGPEQTKVPDPAEPVAGRDDDRLTGQARTLEIATRDDPITGGS
HHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
WTPGVILQLLSALSRLSRDGGDISTIVRGAETSASTYRAGPILAKLLDRGFFKSELLATS
CCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCC
GMSVRIATVALESGELRYMTESGVLVDRDNNPIGSSTFDVSRGVLASCSIPGVFRPVDLD
CCEEEEEEEEECCCCEEEEECCCEEEECCCCCCCCCCHHHCCCCEEECCCCCCEEECCCC
GEHYVDGGLRENVPAEMAIGHLGVTNPYIITCSPQGTARESDFGSRNMLDLVMRTVSILT
CCCEECCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC
DETERDEVAYALNAGAVVIGPEISVHDSMTVDPGLLRINRDYGWMCSAEKHITPGPDEHE
CCCCCCCEEEEECCCEEEECCCEEECCCCCCCCCEEEEECCCCCEECCCCCCCCCCCHHH
LIKDAVRTRVRGWQLEQAWLKEEASREDMDEMQHLKDHLRDIAARLPRDLAPDGVETWGR
HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
VLEGHGHPQAPEDVVIPWQV
HHHCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MELPSWLGIPTLAFGLGSRTPQQGLVLAGGGSRASFQMGALRHLYDVVGITPTSMVATSA
CCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC
GSIVACTLAQWTDPAKQSAALRQLEAMWLEMTDQSDMFTPRAWFSRLLEIGPEWMSLLNR
CCEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
EAAKTKSQRPWLSLPFHRGPEQTKVPDPAEPVAGRDDDRLTGQARTLEIATRDDPITGGS
HHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
WTPGVILQLLSALSRLSRDGGDISTIVRGAETSASTYRAGPILAKLLDRGFFKSELLATS
CCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCC
GMSVRIATVALESGELRYMTESGVLVDRDNNPIGSSTFDVSRGVLASCSIPGVFRPVDLD
CCEEEEEEEEECCCCEEEEECCCEEEECCCCCCCCCCHHHCCCCEEECCCCCCEEECCCC
GEHYVDGGLRENVPAEMAIGHLGVTNPYIITCSPQGTARESDFGSRNMLDLVMRTVSILT
CCCEECCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC
DETERDEVAYALNAGAVVIGPEISVHDSMTVDPGLLRINRDYGWMCSAEKHITPGPDEHE
CCCCCCCEEEEECCCEEEECCCEEECCCCCCCCCEEEEECCCCCEECCCCCCCCCCCHHH
LIKDAVRTRVRGWQLEQAWLKEEASREDMDEMQHLKDHLRDIAARLPRDLAPDGVETWGR
HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
VLEGHGHPQAPEDVVIPWQV
HHHCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA