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The map label for this gene is 50843393

Identifier: 50843393

GI number: 50843393

Start: 2104691

End: 2106514

Strand: Direct

Name: 50843393

Synonym: PPA1944

Alternate gene names: NA

Gene position: 2104691-2106514 (Clockwise)

Preceding gene: 161621790

Following gene: 50843395

Centisome position: 82.21

GC content: 61.02

Gene sequence:

>1824_bases
GTGAGAGGCGCCTCCTCCCCCATCCTCCTCGATGCCTGGGCAGCTCGAAGTTGCCCGGTCAAAACCCAGAATGCCTTCGA
CCCACAACTGTCCGAGTCCGTTGGAGATCCCCGCGACGACGAGCTGTTTGCGGGCGCGCAAGCCCATGTAACGGCGGTCT
GTGACGCCTTGGCTGCTGTACCTGACGCCGTCGACGTGCGATCTGACACGGCCAGTCCGGCTAGTCGTCGAGCCGCAACT
CACCGAGCTATCAATGCCGGGGCACCCGTCATCGTCTGTCCAGAACTGCCATCGTGTCCCCAGGGGCATCGCTCTGGTTC
TCCCGATGCCCTCGCGCTGGCAGGAACCCGCGCCGATGGGGGCCCAGGATACTTACCAATTATCGTCAAGGACTATCTAG
TTTTAGAGAGCCACCACACCTTGGCCGAATTCACGTGGGTGTCTCCGCTCACCGACCCGGATCCTCGTCATGCCCGAATG
TCACTCGACCAGACGTTTCGTGCCAGCCGGGAGCAGGCTCTTATCCAGGCCGTCCATCATTGGCGCTTGCTCGACGACCT
CGGCCTAGTTGCCAGGCCTGACCAGTGCCCAAAACAGCGTCGTCTGGTCGGGCTGATTGGCCATGATGAGGTCGGTATCT
TGAATGACGCTCTGGCAGTCTCTTGGCTGGACCTAGATCACAAGTTCATCCGTACGTTTTCACGGTCGGCGGCTTCGGGA
TGGCGTCGACACAGTGTGCTCGACCGTTACGACCACGAGCACACTTTCCGGGTTTCGGTCGCCGAGCACGCTCTGGCTGA
AGGCGAGCCGATGGTCGCCCCGATTGTGGTACGAGAGTGCGAGTCGTGCCAGTGGTGGACTGTCTGTGAGCCGCGTCTTG
ACGACGATGACCTATCCCTGCGCATCTCGAAGGCTCCGCTAGACGTCCGGGAGATCTCGACACTGCGTCGTCTCGGAGTA
GCGACAGTTGACGATCTGGCCGACGCGAATCTCGACGAGTTGTTGCCGGTTTACCTGTCTGAGGTGCAGCACCGCCCCCG
TCCGGAGCAGAGATTGCGAGCTGCAGCTAGGCGGGCCCGGCTCATCCGCGAGGGTGCGTTGCTAGAGCGTAACGACGACG
ACCCGATTGATGTAGCCTGCTCGCGTCTGGAAATCGACTTCGACATCGAGACTTCCCCTGATGGCTGCGTCTACTTGTGG
GGGTTCGAGGTTAGCGACCCGGAGCATCTGCTCGATTCGACGACGGGCAGTCAGCCCTACTATATGGCATTCAGCGAGTT
CACCGATATGGACGATGCGGCCGAGCACAAGCTGGCTTCCCGTGCAATTCAGTGGCTTGAGGGAATCGTCGCCGCCCATC
CGGAGACGATCATCGTCCACTATTCCGACTACGAGATCGTCCATCTGCGTCACTTTGGCCATGTCTGCAAGGACGAGTTG
ACACGCGCCGCAGTCCACCGCCTCCTCGACTCGGGCTGTTTTGTGGACCTCTTCACCACGATCAGGACCCATTTCTTTGG
CGTTAATGGAATTGGGCTCAAGGTTGTCGCCACCGCCGGGGCGGGATTCTCCTGGCGCGATCCGGATCCGGGCGGCCTCA
ATTCCCAGACCTGGTGGGATCTGGCTGTCCACGACCCAGATCCGGAGGTTCGCGAGGCGTCCAGGGCTCGAGTGTTGGAG
TACAACGAGGATGATGTGCGGGCCACTCTGGCCGTTCGCCATTGGCTTCGCGATAAGTACTCCCGCGAGGCCTTAATCCC
CACCGGGACCCAGGACGACCTAACCGACAAGGGCGCCGACGAACAGACCGATCGAGCACACTAA

Upstream 100 bases:

>100_bases
TTTGCGGTGGTGTGGTGGCTCTGCACCGTGGCTGGAAGGGTAGCGTCAGCCCGCGTTCCGGCGACCACCACGGCGACCCC
GGGGAAGGAGATGGCCTGAG

Downstream 100 bases:

>100_bases
CTCAGCCAGTCCGGTGTTCTTCAATGCCGGCACCAGCGCCATTCCAGTGGTCTTAGCGACCATCGCCCGTATTGGAGAGA
TGAGTAGGACAATCGCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Nuclease; Nuclease-Like Protein; Nuclease RecB Family

Number of amino acids: Translated: 607; Mature: 607

Protein sequence:

>607_residues
MRGASSPILLDAWAARSCPVKTQNAFDPQLSESVGDPRDDELFAGAQAHVTAVCDALAAVPDAVDVRSDTASPASRRAAT
HRAINAGAPVIVCPELPSCPQGHRSGSPDALALAGTRADGGPGYLPIIVKDYLVLESHHTLAEFTWVSPLTDPDPRHARM
SLDQTFRASREQALIQAVHHWRLLDDLGLVARPDQCPKQRRLVGLIGHDEVGILNDALAVSWLDLDHKFIRTFSRSAASG
WRRHSVLDRYDHEHTFRVSVAEHALAEGEPMVAPIVVRECESCQWWTVCEPRLDDDDLSLRISKAPLDVREISTLRRLGV
ATVDDLADANLDELLPVYLSEVQHRPRPEQRLRAAARRARLIREGALLERNDDDPIDVACSRLEIDFDIETSPDGCVYLW
GFEVSDPEHLLDSTTGSQPYYMAFSEFTDMDDAAEHKLASRAIQWLEGIVAAHPETIIVHYSDYEIVHLRHFGHVCKDEL
TRAAVHRLLDSGCFVDLFTTIRTHFFGVNGIGLKVVATAGAGFSWRDPDPGGLNSQTWWDLAVHDPDPEVREASRARVLE
YNEDDVRATLAVRHWLRDKYSREALIPTGTQDDLTDKGADEQTDRAH

Sequences:

>Translated_607_residues
MRGASSPILLDAWAARSCPVKTQNAFDPQLSESVGDPRDDELFAGAQAHVTAVCDALAAVPDAVDVRSDTASPASRRAAT
HRAINAGAPVIVCPELPSCPQGHRSGSPDALALAGTRADGGPGYLPIIVKDYLVLESHHTLAEFTWVSPLTDPDPRHARM
SLDQTFRASREQALIQAVHHWRLLDDLGLVARPDQCPKQRRLVGLIGHDEVGILNDALAVSWLDLDHKFIRTFSRSAASG
WRRHSVLDRYDHEHTFRVSVAEHALAEGEPMVAPIVVRECESCQWWTVCEPRLDDDDLSLRISKAPLDVREISTLRRLGV
ATVDDLADANLDELLPVYLSEVQHRPRPEQRLRAAARRARLIREGALLERNDDDPIDVACSRLEIDFDIETSPDGCVYLW
GFEVSDPEHLLDSTTGSQPYYMAFSEFTDMDDAAEHKLASRAIQWLEGIVAAHPETIIVHYSDYEIVHLRHFGHVCKDEL
TRAAVHRLLDSGCFVDLFTTIRTHFFGVNGIGLKVVATAGAGFSWRDPDPGGLNSQTWWDLAVHDPDPEVREASRARVLE
YNEDDVRATLAVRHWLRDKYSREALIPTGTQDDLTDKGADEQTDRAH
>Mature_607_residues
MRGASSPILLDAWAARSCPVKTQNAFDPQLSESVGDPRDDELFAGAQAHVTAVCDALAAVPDAVDVRSDTASPASRRAAT
HRAINAGAPVIVCPELPSCPQGHRSGSPDALALAGTRADGGPGYLPIIVKDYLVLESHHTLAEFTWVSPLTDPDPRHARM
SLDQTFRASREQALIQAVHHWRLLDDLGLVARPDQCPKQRRLVGLIGHDEVGILNDALAVSWLDLDHKFIRTFSRSAASG
WRRHSVLDRYDHEHTFRVSVAEHALAEGEPMVAPIVVRECESCQWWTVCEPRLDDDDLSLRISKAPLDVREISTLRRLGV
ATVDDLADANLDELLPVYLSEVQHRPRPEQRLRAAARRARLIREGALLERNDDDPIDVACSRLEIDFDIETSPDGCVYLW
GFEVSDPEHLLDSTTGSQPYYMAFSEFTDMDDAAEHKLASRAIQWLEGIVAAHPETIIVHYSDYEIVHLRHFGHVCKDEL
TRAAVHRLLDSGCFVDLFTTIRTHFFGVNGIGLKVVATAGAGFSWRDPDPGGLNSQTWWDLAVHDPDPEVREASRARVLE
YNEDDVRATLAVRHWLRDKYSREALIPTGTQDDLTDKGADEQTDRAH

Specific function: Unknown

COG id: COG2251

COG function: function code R; Predicted nuclease (RecB family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67490; Mature: 67490

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00387 PPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGASSPILLDAWAARSCPVKTQNAFDPQLSESVGDPRDDELFAGAQAHVTAVCDALAAV
CCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHC
PDAVDVRSDTASPASRRAATHRAINAGAPVIVCPELPSCPQGHRSGSPDALALAGTRADG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCC
GPGYLPIIVKDYLVLESHHTLAEFTWVSPLTDPDPRHARMSLDQTFRASREQALIQAVHH
CCCEEHHHHEEEEHEECCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WRLLDDLGLVARPDQCPKQRRLVGLIGHDEVGILNDALAVSWLDLDHKFIRTFSRSAASG
HHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHEEEEECCCHHHHHHHHHHHHHH
WRRHSVLDRYDHEHTFRVSVAEHALAEGEPMVAPIVVRECESCQWWTVCEPRLDDDDLSL
HHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCEEHHHHHHCCCCCEEEEECCCCCCCCCEE
RISKAPLDVREISTLRRLGVATVDDLADANLDELLPVYLSEVQHRPRPEQRLRAAARRAR
EEECCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LIREGALLERNDDDPIDVACSRLEIDFDIETSPDGCVYLWGFEVSDPEHLLDSTTGSQPY
HHHHCCCCCCCCCCCHHHEEEEEEEEEEECCCCCCEEEEEEECCCCHHHHHHCCCCCCCE
YMAFSEFTDMDDAAEHKLASRAIQWLEGIVAAHPETIIVHYSDYEIVHLRHFGHVCKDEL
EEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHHHHHHHHH
TRAAVHRLLDSGCFVDLFTTIRTHFFGVNGIGLKVVATAGAGFSWRDPDPGGLNSQTWWD
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEE
LAVHDPDPEVREASRARVLEYNEDDVRATLAVRHWLRDKYSREALIPTGTQDDLTDKGAD
EEEECCCHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
EQTDRAH
CCCCCCC
>Mature Secondary Structure
MRGASSPILLDAWAARSCPVKTQNAFDPQLSESVGDPRDDELFAGAQAHVTAVCDALAAV
CCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHC
PDAVDVRSDTASPASRRAATHRAINAGAPVIVCPELPSCPQGHRSGSPDALALAGTRADG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCC
GPGYLPIIVKDYLVLESHHTLAEFTWVSPLTDPDPRHARMSLDQTFRASREQALIQAVHH
CCCEEHHHHEEEEHEECCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WRLLDDLGLVARPDQCPKQRRLVGLIGHDEVGILNDALAVSWLDLDHKFIRTFSRSAASG
HHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHEEEEECCCHHHHHHHHHHHHHH
WRRHSVLDRYDHEHTFRVSVAEHALAEGEPMVAPIVVRECESCQWWTVCEPRLDDDDLSL
HHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCEEHHHHHHCCCCCEEEEECCCCCCCCCEE
RISKAPLDVREISTLRRLGVATVDDLADANLDELLPVYLSEVQHRPRPEQRLRAAARRAR
EEECCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LIREGALLERNDDDPIDVACSRLEIDFDIETSPDGCVYLWGFEVSDPEHLLDSTTGSQPY
HHHHCCCCCCCCCCCHHHEEEEEEEEEEECCCCCCEEEEEEECCCCHHHHHHCCCCCCCE
YMAFSEFTDMDDAAEHKLASRAIQWLEGIVAAHPETIIVHYSDYEIVHLRHFGHVCKDEL
EEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHHHHHHHHH
TRAAVHRLLDSGCFVDLFTTIRTHFFGVNGIGLKVVATAGAGFSWRDPDPGGLNSQTWWD
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEE
LAVHDPDPEVREASRARVLEYNEDDVRATLAVRHWLRDKYSREALIPTGTQDDLTDKGAD
EEEECCCHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
EQTDRAH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA