| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843352
Identifier: 50843352
GI number: 50843352
Start: 2060119
End: 2061699
Strand: Reverse
Name: 50843352
Synonym: PPA1900
Alternate gene names: NA
Gene position: 2061699-2060119 (Counterclockwise)
Preceding gene: 50843353
Following gene: 50843351
Centisome position: 80.53
GC content: 60.59
Gene sequence:
>1581_bases GTGAAGCAGCCGGTTGGGCGGCGGCGACGGATCAGATGGCTTGCCTATGTGCGCGCCTGGAGGTCCTGGTCGGTCCTGGA AGGGCTGGTCGGGACGATTCTCATCACGGCCGGATCACTGACCCCGGCCTATCTGCCACTGAACTCGCCATGGTGGTCTC GACTAAACGAGGCTGGTTTACGCGGATCAACGTGGCGTATCGTCGGGACCTTGCTTGTCCTCGTCGGCGTTGGTTTGCTG GTCGATTCCTGGCTGCGCCTGCGGCCTGGTCGCGAGCCGCGTGACCTTACTGCGGAACCGCTGCCGAAGCATGCGCGTCG ATGCTTTAAACACCTTCCAGGTATTCGTGCTGGACTACACCCGTGGGCTGTACTCGGCGTGTGGGGTCTGCCTTTCCTAC TCGCTCCACCCATCTTCAGCCACGACGCCTACTCCTATGCTGCCCAGGGCTGGCTGCTGGAAAACGGCATCAGCCCCTAT GAGGGGTATCCCGGGTTGCTACCTGGGGCCTTCGCCGACCAAGTTGCCCAGGAATGGCGTTATACCAAGACCCCCTACGG TCCTTTAGCCCTCGTCGTCCAACATGGGATCGTCCACCTCACTGGGGACAATCCCTACTGGTCGTCGGTCTTTATGCGTG TTCCGGCTCTCTTAGGCGTTATCGCTATAGGGTTGTTGTTGTCCCGGGTGGCGCGTCGAGTCGGACGAGACCCGCACTTT GCAGCCTGGTTCTCCACCCTCAACCCCATCCTCGTGGTGGACTTCATCGGGGGAGCACATAATGACGCCCTCATGATGGG GCTGGTTGTTATCGGGTTGTGGATTGCTTGCATGACGAGCTGGTCATGGGCGATTGGCGCGGTACTTGTCGGGGGCGCGG CGGCCGTCAAACAGCCGGCATTTATGGTCGCAGTTGCTCTGCCGCTGATCCGTCATCCTATGGCGTCGTGGCATCCGCGC CACCTTTTCCCGGCTTTGGGGCGAACGGTAGGGTCCCTCACTATCTCGGTGGCTGTTTTTTCGGGTATTTCGTGGGCATC GGGTTTAGGGTTTGGCTGGTACCACGCCGTCAACGTTCCCGGTATGGTGTTGACGGTGTCGCCCTTCACTCTGGTCGGCA TGGGTGTGCGAATGGTGCTTGGTTCCTTTGGCGCACATCAAGCAGCGGCAGCTGTCATTCCGATTTCTCAGGCCATTGGC ATGCTCGTCGGTGTGTTTCTGTTGGTGGTCATGGCCGTCCGGTTGCTACCGCGCAAGCCGCTGTCTTTCCTGGCGCTGGG ATTTCTTGCCGTGGCATTATGTGCCCCAGCACTGCATTCCTGGTATGTGCTGTGGGGGGCGCTGCTACTGCCCCTGATCG ACGAAGCTGCCCGCTTCGTTCGCCCTGCGGTGTGGACCACCGTCATCATGTTGTCCTTCAATGCGGTCAACCTGTCCTGG CGCAATAGTGCCGCAGCTCTTGGTGTTGCGCTGGTCCTGGTGCTGGCGGCCCGCCTGGTGTGGCACGAACACAGCCTGGG ACAAGGGTGGACGCACAAAGACGTTCACGTTCCGCACCCCACAAGGTCCATTGACTGTTAG
Upstream 100 bases:
>100_bases AGTCCTGCCCGTTTGACGCCCTGTCCTGGAGTGACAAGCGTGTTTCGGAATCGTTGTCGCGCACCGATTTGGTCAGCGCG TGGGGATTGGACGGTGATCG
Downstream 100 bases:
>100_bases AGCGCCCGGTATGCAGCGGATAGTTCGATGGCGGTAGCCGTGGTTGTTGGGAGCGGAAAGTGACGACGCGAGTTCTTGAC GTGGCAGGCTGGGGATATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha(1-_6) Mannopyranosyltransferase; Alpha Mannopyranosyltransferase; Mannosyltransferase MptB; Mannosyltransferase MptA; Mannopyranosyltransferase; Carotene Biosynthesis Associated Membrane Protein; Abc Transporter Integral Membrane Protein; Transmembrane Protein; Integral-Membrane Protein; Acyltransferase
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MKQPVGRRRRIRWLAYVRAWRSWSVLEGLVGTILITAGSLTPAYLPLNSPWWSRLNEAGLRGSTWRIVGTLLVLVGVGLL VDSWLRLRPGREPRDLTAEPLPKHARRCFKHLPGIRAGLHPWAVLGVWGLPFLLAPPIFSHDAYSYAAQGWLLENGISPY EGYPGLLPGAFADQVAQEWRYTKTPYGPLALVVQHGIVHLTGDNPYWSSVFMRVPALLGVIAIGLLLSRVARRVGRDPHF AAWFSTLNPILVVDFIGGAHNDALMMGLVVIGLWIACMTSWSWAIGAVLVGGAAAVKQPAFMVAVALPLIRHPMASWHPR HLFPALGRTVGSLTISVAVFSGISWASGLGFGWYHAVNVPGMVLTVSPFTLVGMGVRMVLGSFGAHQAAAAVIPISQAIG MLVGVFLLVVMAVRLLPRKPLSFLALGFLAVALCAPALHSWYVLWGALLLPLIDEAARFVRPAVWTTVIMLSFNAVNLSW RNSAAALGVALVLVLAARLVWHEHSLGQGWTHKDVHVPHPTRSIDC
Sequences:
>Translated_526_residues MKQPVGRRRRIRWLAYVRAWRSWSVLEGLVGTILITAGSLTPAYLPLNSPWWSRLNEAGLRGSTWRIVGTLLVLVGVGLL VDSWLRLRPGREPRDLTAEPLPKHARRCFKHLPGIRAGLHPWAVLGVWGLPFLLAPPIFSHDAYSYAAQGWLLENGISPY EGYPGLLPGAFADQVAQEWRYTKTPYGPLALVVQHGIVHLTGDNPYWSSVFMRVPALLGVIAIGLLLSRVARRVGRDPHF AAWFSTLNPILVVDFIGGAHNDALMMGLVVIGLWIACMTSWSWAIGAVLVGGAAAVKQPAFMVAVALPLIRHPMASWHPR HLFPALGRTVGSLTISVAVFSGISWASGLGFGWYHAVNVPGMVLTVSPFTLVGMGVRMVLGSFGAHQAAAAVIPISQAIG MLVGVFLLVVMAVRLLPRKPLSFLALGFLAVALCAPALHSWYVLWGALLLPLIDEAARFVRPAVWTTVIMLSFNAVNLSW RNSAAALGVALVLVLAARLVWHEHSLGQGWTHKDVHVPHPTRSIDC >Mature_526_residues MKQPVGRRRRIRWLAYVRAWRSWSVLEGLVGTILITAGSLTPAYLPLNSPWWSRLNEAGLRGSTWRIVGTLLVLVGVGLL VDSWLRLRPGREPRDLTAEPLPKHARRCFKHLPGIRAGLHPWAVLGVWGLPFLLAPPIFSHDAYSYAAQGWLLENGISPY EGYPGLLPGAFADQVAQEWRYTKTPYGPLALVVQHGIVHLTGDNPYWSSVFMRVPALLGVIAIGLLLSRVARRVGRDPHF AAWFSTLNPILVVDFIGGAHNDALMMGLVVIGLWIACMTSWSWAIGAVLVGGAAAVKQPAFMVAVALPLIRHPMASWHPR HLFPALGRTVGSLTISVAVFSGISWASGLGFGWYHAVNVPGMVLTVSPFTLVGMGVRMVLGSFGAHQAAAAVIPISQAIG MLVGVFLLVVMAVRLLPRKPLSFLALGFLAVALCAPALHSWYVLWGALLLPLIDEAARFVRPAVWTTVIMLSFNAVNLSW RNSAAALGVALVLVLAARLVWHEHSLGQGWTHKDVHVPHPTRSIDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57261; Mature: 57261
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQPVGRRRRIRWLAYVRAWRSWSVLEGLVGTILITAGSLTPAYLPLNSPWWSRLNEAGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCC RGSTWRIVGTLLVLVGVGLLVDSWLRLRPGREPRDLTAEPLPKHARRCFKHLPGIRAGLH CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC PWAVLGVWGLPFLLAPPIFSHDAYSYAAQGWLLENGISPYEGYPGLLPGAFADQVAQEWR HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHC YTKTPYGPLALVVQHGIVHLTGDNPYWSSVFMRVPALLGVIAIGLLLSRVARRVGRDPHF CCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AAWFSTLNPILVVDFIGGAHNDALMMGLVVIGLWIACMTSWSWAIGAVLVGGAAAVKQPA HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHH FMVAVALPLIRHPMASWHPRHLFPALGRTVGSLTISVAVFSGISWASGLGFGWYHAVNVP HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHCCCC GMVLTVSPFTLVGMGVRMVLGSFGAHQAAAAVIPISQAIGMLVGVFLLVVMAVRLLPRKP CEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LSFLALGFLAVALCAPALHSWYVLWGALLLPLIDEAARFVRPAVWTTVIMLSFNAVNLSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC RNSAAALGVALVLVLAARLVWHEHSLGQGWTHKDVHVPHPTRSIDC CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQPVGRRRRIRWLAYVRAWRSWSVLEGLVGTILITAGSLTPAYLPLNSPWWSRLNEAGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCC RGSTWRIVGTLLVLVGVGLLVDSWLRLRPGREPRDLTAEPLPKHARRCFKHLPGIRAGLH CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC PWAVLGVWGLPFLLAPPIFSHDAYSYAAQGWLLENGISPYEGYPGLLPGAFADQVAQEWR HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHC YTKTPYGPLALVVQHGIVHLTGDNPYWSSVFMRVPALLGVIAIGLLLSRVARRVGRDPHF CCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AAWFSTLNPILVVDFIGGAHNDALMMGLVVIGLWIACMTSWSWAIGAVLVGGAAAVKQPA HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHH FMVAVALPLIRHPMASWHPRHLFPALGRTVGSLTISVAVFSGISWASGLGFGWYHAVNVP HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHCCCC GMVLTVSPFTLVGMGVRMVLGSFGAHQAAAAVIPISQAIGMLVGVFLLVVMAVRLLPRKP CEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LSFLALGFLAVALCAPALHSWYVLWGALLLPLIDEAARFVRPAVWTTVIMLSFNAVNLSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC RNSAAALGVALVLVLAARLVWHEHSLGQGWTHKDVHVPHPTRSIDC CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA