| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843321
Identifier: 50843321
GI number: 50843321
Start: 2020202
End: 2021434
Strand: Reverse
Name: 50843321
Synonym: PPA1867
Alternate gene names: NA
Gene position: 2021434-2020202 (Counterclockwise)
Preceding gene: 50843322
Following gene: 50843319
Centisome position: 78.95
GC content: 60.5
Gene sequence:
>1233_bases ATGGGTGGGGACACGATCATGTTCATTGCCGCGAACATCGGCTATATGTGGGGTCTAGCGCTCGGTATCGTCTCTATCCT TCTGCTGTGGTCCCAGCGGGGGCCGAATGTCGACCACGGCTGGGTTTTGTGGATAGCGGTGGTGCTGTCATGTGTAGCAA GCATTCACCATGAATTGAATGCGCCGGGAATCGTCGGGGCAATTGTTGCCATGGCTCTCATCACACCTGCTGGGAAATGG ACTACTCGGTGGGCGGTGGCTCTGATCGTGGCGGCTGTGGGAAATGCCGCGAGAATGGGAATGCCGGGTTTGTGGGCACG TCGTCACCGAGTGGGAGACCCATACCCGTACCCGAAATCAACCGGGGAGGTTCCCAAACGAGTGTCATTCATCGTCGACT CCGTCAGTCATTCGCTCAGCAATTACCCGGTCGTGTTCTTTGCGATCATGCTGTCAGTCATCGCTATGTGTCTGGTAGTC ATGAAGCGCGGATTCCACCGTCGCGCTATCGGTATCCTGCTCACCCTGTTCTGTGTGGCGTCTGTCGGGCTGGCCGCGGC CAGCCTGCGAATTATTACGGTACTCGCGCAACGAAAGCTCGTGGGAGATATTCGACTGTACTTCTCGGCCACCGGAGTGC TGAGCGGGGTGTGCTTCGGCATCGTGATGGTGATCCTTGTAGTGCTCACAGTGATGGTTGCTCGCTTACCGGGATGCGGC ATGGTGGGGGTGTCGACGGGCGCGGCGTTTGGTTATGATGCGCTGCCGTTGATTCAAGGTTCTCCAGGGGGACGAACGTC CTTCCTCGGCCTCGTGGTTTTTACCGTGAGCGCGCTGATATGGGCATGGGCTGCAGTCGGGCTGATGCGGGGTAGCACAG CCCAGGGCGACAGCTGTGTTCCAGCCTCGGAATCTGGCGCGCGAGTTATGGCGGCATCGGAGACGCAACTCGCGACGGTC CTGGCCATGGTTACTACCGCGTCATGTCTGGGTACCGGCCCATTGGGAGCGTGGGAGATGCTCGAGGGAGCAACACTCAA CGGTAGCGTCTGGCGACCGGTCAACGCCCAGGTAGACGCGGCACGCCGTGGGGAGCGCGACACAGTCGTCGTCCCGAAGG CGCTGCCCGCCCCAGACTGGTTGCCCGACTATGCGGGCCGCCGTGGATCCACCGAGGCCCGCCTTCATCAGTATTACGAC CTCCCGAAGAACGTCACCGTGGTGCGTCGCTGA
Upstream 100 bases:
>100_bases CATTCGAGATCTACGGGCAGTAGTATCTCCCGGTGCCGACCTTTTAGCAGGCGTCGGTGCATTTCTCGCACCAATGGCCG TGATTGGGTTCGAGCCACAT
Downstream 100 bases:
>100_bases GAGCACCGTCAAGGACTTCGCGGAGGGACGTGACGAGAATCCGAATGTGCTCGTCAGTGTGACGTGCCGTGAGACAAATA CGCAGGATGGCGTCGCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MGGDTIMFIAANIGYMWGLALGIVSILLLWSQRGPNVDHGWVLWIAVVLSCVASIHHELNAPGIVGAIVAMALITPAGKW TTRWAVALIVAAVGNAARMGMPGLWARRHRVGDPYPYPKSTGEVPKRVSFIVDSVSHSLSNYPVVFFAIMLSVIAMCLVV MKRGFHRRAIGILLTLFCVASVGLAAASLRIITVLAQRKLVGDIRLYFSATGVLSGVCFGIVMVILVVLTVMVARLPGCG MVGVSTGAAFGYDALPLIQGSPGGRTSFLGLVVFTVSALIWAWAAVGLMRGSTAQGDSCVPASESGARVMAASETQLATV LAMVTTASCLGTGPLGAWEMLEGATLNGSVWRPVNAQVDAARRGERDTVVVPKALPAPDWLPDYAGRRGSTEARLHQYYD LPKNVTVVRR
Sequences:
>Translated_410_residues MGGDTIMFIAANIGYMWGLALGIVSILLLWSQRGPNVDHGWVLWIAVVLSCVASIHHELNAPGIVGAIVAMALITPAGKW TTRWAVALIVAAVGNAARMGMPGLWARRHRVGDPYPYPKSTGEVPKRVSFIVDSVSHSLSNYPVVFFAIMLSVIAMCLVV MKRGFHRRAIGILLTLFCVASVGLAAASLRIITVLAQRKLVGDIRLYFSATGVLSGVCFGIVMVILVVLTVMVARLPGCG MVGVSTGAAFGYDALPLIQGSPGGRTSFLGLVVFTVSALIWAWAAVGLMRGSTAQGDSCVPASESGARVMAASETQLATV LAMVTTASCLGTGPLGAWEMLEGATLNGSVWRPVNAQVDAARRGERDTVVVPKALPAPDWLPDYAGRRGSTEARLHQYYD LPKNVTVVRR >Mature_409_residues GGDTIMFIAANIGYMWGLALGIVSILLLWSQRGPNVDHGWVLWIAVVLSCVASIHHELNAPGIVGAIVAMALITPAGKWT TRWAVALIVAAVGNAARMGMPGLWARRHRVGDPYPYPKSTGEVPKRVSFIVDSVSHSLSNYPVVFFAIMLSVIAMCLVVM KRGFHRRAIGILLTLFCVASVGLAAASLRIITVLAQRKLVGDIRLYFSATGVLSGVCFGIVMVILVVLTVMVARLPGCGM VGVSTGAAFGYDALPLIQGSPGGRTSFLGLVVFTVSALIWAWAAVGLMRGSTAQGDSCVPASESGARVMAASETQLATVL AMVTTASCLGTGPLGAWEMLEGATLNGSVWRPVNAQVDAARRGERDTVVVPKALPAPDWLPDYAGRRGSTEARLHQYYDL PKNVTVVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43410; Mature: 43279
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGDTIMFIAANIGYMWGLALGIVSILLLWSQRGPNVDHGWVLWIAVVLSCVASIHHELN CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC APGIVGAIVAMALITPAGKWTTRWAVALIVAAVGNAARMGMPGLWARRHRVGDPYPYPKS CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHCCCCCCCCCCC TGEVPKRVSFIVDSVSHSLSNYPVVFFAIMLSVIAMCLVVMKRGFHRRAIGILLTLFCVA CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SVGLAAASLRIITVLAQRKLVGDIRLYFSATGVLSGVCFGIVMVILVVLTVMVARLPGCG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MVGVSTGAAFGYDALPLIQGSPGGRTSFLGLVVFTVSALIWAWAAVGLMRGSTAQGDSCV EEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PASESGARVMAASETQLATVLAMVTTASCLGTGPLGAWEMLEGATLNGSVWRPVNAQVDA CCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEECCCCCCHHH ARRGERDTVVVPKALPAPDWLPDYAGRRGSTEARLHQYYDLPKNVTVVRR HHCCCCCEEEECCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCEEEECC >Mature Secondary Structure GGDTIMFIAANIGYMWGLALGIVSILLLWSQRGPNVDHGWVLWIAVVLSCVASIHHELN CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC APGIVGAIVAMALITPAGKWTTRWAVALIVAAVGNAARMGMPGLWARRHRVGDPYPYPKS CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHCCCCCCCCCCC TGEVPKRVSFIVDSVSHSLSNYPVVFFAIMLSVIAMCLVVMKRGFHRRAIGILLTLFCVA CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SVGLAAASLRIITVLAQRKLVGDIRLYFSATGVLSGVCFGIVMVILVVLTVMVARLPGCG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MVGVSTGAAFGYDALPLIQGSPGGRTSFLGLVVFTVSALIWAWAAVGLMRGSTAQGDSCV EEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PASESGARVMAASETQLATVLAMVTTASCLGTGPLGAWEMLEGATLNGSVWRPVNAQVDA CCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEECCCCCCHHH ARRGERDTVVVPKALPAPDWLPDYAGRRGSTEARLHQYYDLPKNVTVVRR HHCCCCCEEEECCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA