| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843322
Identifier: 50843322
GI number: 50843322
Start: 2021552
End: 2021881
Strand: Reverse
Name: 50843322
Synonym: PPA1868
Alternate gene names: NA
Gene position: 2021881-2021552 (Counterclockwise)
Preceding gene: 50843323
Following gene: 50843321
Centisome position: 78.97
GC content: 59.09
Gene sequence:
>330_bases ATGACTGAACACAGGGAGACGAGGGTTGCGCTGCGGCGCCATCCACTTCTGCGACGCCCAATAGTGTGGTTCTGGGCGCT CGTCACCTGTTATTGGGCGTTGGTGTGGCGAACGCCTGTGTGGGATATCGATGATTTGTATTTCGCCACCCGATCTGGCA CTCCCGGCGGGCGTATTGACTGGGCGGATTTTGCGCGGCTCACCGTCTACGATCTGGTAGAGCGCAATGGTCGTTTCTCG GACATGATGGTGCAGCTCGCCATGGCGATGGGGGGATGGATTCGCGTTCCCCTCATACTCTCGTCTGTGTCGGCGTCGCT GGCACTATAG
Upstream 100 bases:
>100_bases CGCGGGTGTCCCCGCCGCTGTTCGAGGCGATGGAGATTCTGGGCAAGGAGTCGACTCTTCGTCGTATGCAAAGGTTCGAG GCTGAGATAGACCAGAAGTA
Downstream 100 bases:
>100_bases CTCATGGTGCGAGCCCTCATTCGAGATCTACGGGCAGTAGTATCTCCCGGTGCCGACCTTTTAGCAGGCGTCGGTGCATT TCTCGCACCAATGGCCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MTEHRETRVALRRHPLLRRPIVWFWALVTCYWALVWRTPVWDIDDLYFATRSGTPGGRIDWADFARLTVYDLVERNGRFS DMMVQLAMAMGGWIRVPLILSSVSASLAL
Sequences:
>Translated_109_residues MTEHRETRVALRRHPLLRRPIVWFWALVTCYWALVWRTPVWDIDDLYFATRSGTPGGRIDWADFARLTVYDLVERNGRFS DMMVQLAMAMGGWIRVPLILSSVSASLAL >Mature_108_residues TEHRETRVALRRHPLLRRPIVWFWALVTCYWALVWRTPVWDIDDLYFATRSGTPGGRIDWADFARLTVYDLVERNGRFSD MMVQLAMAMGGWIRVPLILSSVSASLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12696; Mature: 12565
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEHRETRVALRRHPLLRRPIVWFWALVTCYWALVWRTPVWDIDDLYFATRSGTPGGRID CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCC WADFARLTVYDLVERNGRFSDMMVQLAMAMGGWIRVPLILSSVSASLAL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEHRETRVALRRHPLLRRPIVWFWALVTCYWALVWRTPVWDIDDLYFATRSGTPGGRID CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCC WADFARLTVYDLVERNGRFSDMMVQLAMAMGGWIRVPLILSSVSASLAL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA