Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50843280

Identifier: 50843280

GI number: 50843280

Start: 1992150

End: 1992782

Strand: Reverse

Name: 50843280

Synonym: PPA1823

Alternate gene names: NA

Gene position: 1992782-1992150 (Counterclockwise)

Preceding gene: 50843281

Following gene: 50843273

Centisome position: 77.83

GC content: 63.67

Gene sequence:

>633_bases
ATGAGGAAGATCCCACTCGTGCTGGCCGGCGTGGCGGCTGCCGTCACCCCCGTCGTCCTGGCGGCTCCCGGCCCTGAGCC
GGCCATGCCTGACGGCCCCGCTGGCCGACCTGTGCGCACCGTCGACGACGCCGTTGCTGCGTGCCGGGCGTCCGGGAAGG
CGGGTTGGGAGCTTGTCGACGAAGCAACCCAACTCGTGCACCGGATGTACACCCACTACTCGTGTTGGCACCTCTGGCTC
AGCCCCGAGACCTCGCTAGCGGCTGGGCACGGCCATTCAGGTCAGTACAACATTGTGCTGGGAAAGATACTCGAGCAGTT
GGGGTTCCAGGTGCGTCCAGTCCACGCAGCACGGGTCCGTCTGGATCACCATCCGTGGTATCACACCGGACACAGCTGGC
TCCGGGTGATACACCAGGGAAAAGAGCTCGACGTCTGCGCGTCACGACCAGGTAACACCGCTGGTAACGTCGCCTTCGTC
CCCGTCACCGAGGTACTCGATCGCACCAGGCTCAATAGCATTGATACCACCCTCGCCCTGGCTCCGATCGTTGTTGCTAG
TGTCTGGAAATCCTGGCTGACGGGATCGGGCATCCAGAGTTGGATGTACCGCCCATTTGGGCTGTCAGCCTGA

Upstream 100 bases:

>100_bases
ACGCCAAGCTCTACTGGAAACAGCGCCTCGTGAACCGTCGCAACGCGCGGCGGGACACCCAAGACCCCCTCGCCCCAACC
GACGACTCCCAGGAGCAGTG

Downstream 100 bases:

>100_bases
GCGCCGGGCCCAGGGTCAGGCATGTGACAACTCTCCAGTTGCCGTTTTCGTCAGGGGCCGGTTCATGGTCTCAGGTGCCA
GCGTCTGGCCGGTCACAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MRKIPLVLAGVAAAVTPVVLAAPGPEPAMPDGPAGRPVRTVDDAVAACRASGKAGWELVDEATQLVHRMYTHYSCWHLWL
SPETSLAAGHGHSGQYNIVLGKILEQLGFQVRPVHAARVRLDHHPWYHTGHSWLRVIHQGKELDVCASRPGNTAGNVAFV
PVTEVLDRTRLNSIDTTLALAPIVVASVWKSWLTGSGIQSWMYRPFGLSA

Sequences:

>Translated_210_residues
MRKIPLVLAGVAAAVTPVVLAAPGPEPAMPDGPAGRPVRTVDDAVAACRASGKAGWELVDEATQLVHRMYTHYSCWHLWL
SPETSLAAGHGHSGQYNIVLGKILEQLGFQVRPVHAARVRLDHHPWYHTGHSWLRVIHQGKELDVCASRPGNTAGNVAFV
PVTEVLDRTRLNSIDTTLALAPIVVASVWKSWLTGSGIQSWMYRPFGLSA
>Mature_210_residues
MRKIPLVLAGVAAAVTPVVLAAPGPEPAMPDGPAGRPVRTVDDAVAACRASGKAGWELVDEATQLVHRMYTHYSCWHLWL
SPETSLAAGHGHSGQYNIVLGKILEQLGFQVRPVHAARVRLDHHPWYHTGHSWLRVIHQGKELDVCASRPGNTAGNVAFV
PVTEVLDRTRLNSIDTTLALAPIVVASVWKSWLTGSGIQSWMYRPFGLSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22770; Mature: 22770

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIPLVLAGVAAAVTPVVLAAPGPEPAMPDGPAGRPVRTVDDAVAACRASGKAGWELVD
CCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
EATQLVHRMYTHYSCWHLWLSPETSLAAGHGHSGQYNIVLGKILEQLGFQVRPVHAARVR
HHHHHHHHHHHHHHEEEEEECCCCCEECCCCCCCEEEHHHHHHHHHHCCEECCCHHHEEE
LDHHPWYHTGHSWLRVIHQGKELDVCASRPGNTAGNVAFVPVTEVLDRTRLNSIDTTLAL
ECCCCCEECHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHH
APIVVASVWKSWLTGSGIQSWMYRPFGLSA
HHHHHHHHHHHHHCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MRKIPLVLAGVAAAVTPVVLAAPGPEPAMPDGPAGRPVRTVDDAVAACRASGKAGWELVD
CCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
EATQLVHRMYTHYSCWHLWLSPETSLAAGHGHSGQYNIVLGKILEQLGFQVRPVHAARVR
HHHHHHHHHHHHHHEEEEEECCCCCEECCCCCCCEEEHHHHHHHHHHCCEECCCHHHEEE
LDHHPWYHTGHSWLRVIHQGKELDVCASRPGNTAGNVAFVPVTEVLDRTRLNSIDTTLAL
ECCCCCEECHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHH
APIVVASVWKSWLTGSGIQSWMYRPFGLSA
HHHHHHHHHHHHHCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA