| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843204
Identifier: 50843204
GI number: 50843204
Start: 1903638
End: 1904603
Strand: Reverse
Name: 50843204
Synonym: PPA1744
Alternate gene names: NA
Gene position: 1904603-1903638 (Counterclockwise)
Preceding gene: 50843207
Following gene: 50843203
Centisome position: 74.39
GC content: 60.46
Gene sequence:
>966_bases ATGACGGCGCTCGGTCGGCAAGCGCTTGCGGTGACCGCCAGATGGCTTCGCGACGGACTCTGTAGCGGCAAGAGGGGCCG CTCAAACAGCCTGGTAGTGCCCTGGTTTTCCTGCCAGACGATGATCACTCCATGGCAATTAGAAGGATACCGGGTGCACA GGCTGCCGGTCGGCCACAACTTCCAGCTCGACGCGGACGCTCTTGCTAATGCCCTTGCCGCCTGCCGACGCCAAGGTGAA CACCCAGCGGTGTTGACCTGCGAGACCTTCGGAATTCAGCCGAGTTCGAAGCTCATCGAGGTGCTCAAGCAGGCCCGTCG TGACGGTGTGCCAGTTATCGTCGATCGTACTCATTCTTTTCTCGCGCCGTCCCGGACCCCTGCTGACATTGAGGTGGTCA GTACTCGCAAGCTTCTTCCCCTGACCGAGGTCGCATGGGTGCAAGCAGACGAAGACCTTTCGGAACTCGTTGGAACGCGA GACAACAAAGACGTGTTTCTGACGAGCGCCCGGCGTCGGTTTTTGAAGGATCGAGGCCTCGACACCTTCGAAGAGGCTGA AAACCTGGCTGACGACTGCTGGGTTCCAGTTCCTCCTGACGATGACGCCCGAGCTGAATTTGAAGGGTTTAACCTTGCTG AGTTCTCTCGCCGGGTGGACCAGACCCGCGCTGCCCTCCTGAGCGGCTTGGAGGTGGCCCAGATCGTCAATCCGAGTGCC CGCTGCGCGATGGTGCTTTCACACCCGGCCGCCGATGAGTTGGCAGATCGGCTGCGTAACGTCGGCGTGGTTGGGCCATT GCACTGGGATCGGCCGCAGCATTTAGACGTCGACTGGCCCGACGACCTCGTCAGTCTGCCTCCGGTGATGAACGAGACCA CGATTGATCGGGTTATTGACGTGGCCACGATGGTGGTCGAGGGAGCGCGGTTCTCGTGGAAAGATAGGGACCTGTTGAGG CCGTGA
Upstream 100 bases:
>100_bases GACACCGGTCTACCGATGGCAGTCGGAGGCTGGGAGAGTAGCTGGTTAACAGCGCGAAAATTGCTGGTGAATGTGTGGTG ATGGTGTGACAGTGACGACG
Downstream 100 bases:
>100_bases CACAAGGAGGATCCATGACCGCCCAGAAACTCGACGGCAAGGCCACTGCCGCCGCGATCAAGTCCGAACTGGCCGAACGC GTAGCAGCTCTGCGCGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTALGRQALAVTARWLRDGLCSGKRGRSNSLVVPWFSCQTMITPWQLEGYRVHRLPVGHNFQLDADALANALAACRRQGE HPAVLTCETFGIQPSSKLIEVLKQARRDGVPVIVDRTHSFLAPSRTPADIEVVSTRKLLPLTEVAWVQADEDLSELVGTR DNKDVFLTSARRRFLKDRGLDTFEEAENLADDCWVPVPPDDDARAEFEGFNLAEFSRRVDQTRAALLSGLEVAQIVNPSA RCAMVLSHPAADELADRLRNVGVVGPLHWDRPQHLDVDWPDDLVSLPPVMNETTIDRVIDVATMVVEGARFSWKDRDLLR P
Sequences:
>Translated_321_residues MTALGRQALAVTARWLRDGLCSGKRGRSNSLVVPWFSCQTMITPWQLEGYRVHRLPVGHNFQLDADALANALAACRRQGE HPAVLTCETFGIQPSSKLIEVLKQARRDGVPVIVDRTHSFLAPSRTPADIEVVSTRKLLPLTEVAWVQADEDLSELVGTR DNKDVFLTSARRRFLKDRGLDTFEEAENLADDCWVPVPPDDDARAEFEGFNLAEFSRRVDQTRAALLSGLEVAQIVNPSA RCAMVLSHPAADELADRLRNVGVVGPLHWDRPQHLDVDWPDDLVSLPPVMNETTIDRVIDVATMVVEGARFSWKDRDLLR P >Mature_320_residues TALGRQALAVTARWLRDGLCSGKRGRSNSLVVPWFSCQTMITPWQLEGYRVHRLPVGHNFQLDADALANALAACRRQGEH PAVLTCETFGIQPSSKLIEVLKQARRDGVPVIVDRTHSFLAPSRTPADIEVVSTRKLLPLTEVAWVQADEDLSELVGTRD NKDVFLTSARRRFLKDRGLDTFEEAENLADDCWVPVPPDDDARAEFEGFNLAEFSRRVDQTRAALLSGLEVAQIVNPSAR CAMVLSHPAADELADRLRNVGVVGPLHWDRPQHLDVDWPDDLVSLPPVMNETTIDRVIDVATMVVEGARFSWKDRDLLRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35842; Mature: 35711
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALGRQALAVTARWLRDGLCSGKRGRSNSLVVPWFSCQTMITPWQLEGYRVHRLPVGHN CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEECCCEEECCEEEEEECCCCC FQLDADALANALAACRRQGEHPAVLTCETFGIQPSSKLIEVLKQARRDGVPVIVDRTHSF CEECHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCHH LAPSRTPADIEVVSTRKLLPLTEVAWVQADEDLSELVGTRDNKDVFLTSARRRFLKDRGL CCCCCCCCCEEEECCCCCCCHHHHHHEECCHHHHHHHCCCCCCCEEEHHHHHHHHHHCCC DTFEEAENLADDCWVPVPPDDDARAEFEGFNLAEFSRRVDQTRAALLSGLEVAQIVNPSA CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCH RCAMVLSHPAADELADRLRNVGVVGPLHWDRPQHLDVDWPDDLVSLPPVMNETTIDRVID HEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHH VATMVVEGARFSWKDRDLLRP HHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TALGRQALAVTARWLRDGLCSGKRGRSNSLVVPWFSCQTMITPWQLEGYRVHRLPVGHN CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEECCCEEECCEEEEEECCCCC FQLDADALANALAACRRQGEHPAVLTCETFGIQPSSKLIEVLKQARRDGVPVIVDRTHSF CEECHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCHH LAPSRTPADIEVVSTRKLLPLTEVAWVQADEDLSELVGTRDNKDVFLTSARRRFLKDRGL CCCCCCCCCEEEECCCCCCCHHHHHHEECCHHHHHHHCCCCCCCEEEHHHHHHHHHHCCC DTFEEAENLADDCWVPVPPDDDARAEFEGFNLAEFSRRVDQTRAALLSGLEVAQIVNPSA CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCH RCAMVLSHPAADELADRLRNVGVVGPLHWDRPQHLDVDWPDDLVSLPPVMNETTIDRVID HEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHH VATMVVEGARFSWKDRDLLRP HHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA