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The map label for this gene is ygaJ [H]

Identifier: 50843166

GI number: 50843166

Start: 1858427

End: 1859101

Strand: Reverse

Name: ygaJ [H]

Synonym: PPA1704

Alternate gene names: 50843166

Gene position: 1859101-1858427 (Counterclockwise)

Preceding gene: 50843167

Following gene: 50843164

Centisome position: 72.61

GC content: 62.07

Gene sequence:

>675_bases
ATGTCGAACCGCGGTGAGCCTACCGCTCTCGACCGTCACATCCTTGACCTGTCTGGAAAGTCTTCCCCCCTGGTGTGCTT
CGCCCCCACCGCAGCTGCTGACGATCCGGTCTACGTCAACCGTTTTCTGGCCGCCTATTCGGCCCTCGGGGTGCGCAACA
TGGTGTTGACACTGTGGCAGGGAGCAGCGGAGTCGGTGGAGCGTCTCTCTCAAGCGGACATCGTTGTCTCTGGTGGTGGA
TCAGCCGCCAACCTTATGGCGCTGTGGAAGATGCACGGGGTCGACCACGTGATTCGGCGCATGATCGCAGCTGACAGCGA
CGTCGTCCTCGCCGGTGTCTCTGCTGGTGCAGCGTGCTGGTTCTCCGGGTGTCTAACCGACGCTTTCGGGGATCTGCGAG
CTTGGCGTGGCGGTATGGGTCTGTTGGACGGTTCTTTCTGTCCTCACTTCGACGGTGAGTCCGAGCGAGCGCCTATCTAC
GCCCAAGCGGTCGCCAACGGGGTGCTTCCTGGCGGATACGCGGTCGACGATGGGGCGGCGGTGCATTTTGTCGACGGAAT
GTTCGCTGGGGCGGTCGCTGAGCATGAAAGGGCCGAGGTATCAAGGTTCTCTGCCTCTGATGAGCCGACATCGTCGGGAG
TTCTGCGCGAGGAACTCGACGTCACCGTGCTGTGA

Upstream 100 bases:

>100_bases
GAACCAGGTGAGTTCCGCTACGGCGTCCTGAGCGTTCCCACCATCTAGACTGCTGACTATGACGACCCACATCTTGGCCC
TTGGTGGTGGCGGTTTTTCG

Downstream 100 bases:

>100_bases
CCGATTCCTCGCAGTAGTCGTTCAGGTACTCGCCGTATCCGTTGTCCGTCAGGTCCGTGAAGAGGTCGACGACCCGACGT
GCCCCGGGGACATCGTTAAG

Product: peptidase S51 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSNRGEPTALDRHILDLSGKSSPLVCFAPTAAADDPVYVNRFLAAYSALGVRNMVLTLWQGAAESVERLSQADIVVSGGG
SAANLMALWKMHGVDHVIRRMIAADSDVVLAGVSAGAACWFSGCLTDAFGDLRAWRGGMGLLDGSFCPHFDGESERAPIY
AQAVANGVLPGGYAVDDGAAVHFVDGMFAGAVAEHERAEVSRFSASDEPTSSGVLREELDVTVL

Sequences:

>Translated_224_residues
MSNRGEPTALDRHILDLSGKSSPLVCFAPTAAADDPVYVNRFLAAYSALGVRNMVLTLWQGAAESVERLSQADIVVSGGG
SAANLMALWKMHGVDHVIRRMIAADSDVVLAGVSAGAACWFSGCLTDAFGDLRAWRGGMGLLDGSFCPHFDGESERAPIY
AQAVANGVLPGGYAVDDGAAVHFVDGMFAGAVAEHERAEVSRFSASDEPTSSGVLREELDVTVL
>Mature_223_residues
SNRGEPTALDRHILDLSGKSSPLVCFAPTAAADDPVYVNRFLAAYSALGVRNMVLTLWQGAAESVERLSQADIVVSGGGS
AANLMALWKMHGVDHVIRRMIAADSDVVLAGVSAGAACWFSGCLTDAFGDLRAWRGGMGLLDGSFCPHFDGESERAPIYA
QAVANGVLPGGYAVDDGAAVHFVDGMFAGAVAEHERAEVSRFSASDEPTSSGVLREELDVTVL

Specific function: Unknown

COG id: COG3340

COG function: function code E; Peptidase E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: NA

Molecular weight: Translated: 23446; Mature: 23314

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRGEPTALDRHILDLSGKSSPLVCFAPTAAADDPVYVNRFLAAYSALGVRNMVLTLWQ
CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GAAESVERLSQADIVVSGGGSAANLMALWKMHGVDHVIRRMIAADSDVVLAGVSAGAACW
HHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEECCCCHHHH
FSGCLTDAFGDLRAWRGGMGLLDGSFCPHFDGESERAPIYAQAVANGVLPGGYAVDDGAA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCE
VHFVDGMFAGAVAEHERAEVSRFSASDEPTSSGVLREELDVTVL
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEECC
>Mature Secondary Structure 
SNRGEPTALDRHILDLSGKSSPLVCFAPTAAADDPVYVNRFLAAYSALGVRNMVLTLWQ
CCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GAAESVERLSQADIVVSGGGSAANLMALWKMHGVDHVIRRMIAADSDVVLAGVSAGAACW
HHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEECCCCHHHH
FSGCLTDAFGDLRAWRGGMGLLDGSFCPHFDGESERAPIYAQAVANGVLPGGYAVDDGAA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCE
VHFVDGMFAGAVAEHERAEVSRFSASDEPTSSGVLREELDVTVL
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]