Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

Click here to switch to the map view.

The map label for this gene is 50843150

Identifier: 50843150

GI number: 50843150

Start: 1840182

End: 1841201

Strand: Reverse

Name: 50843150

Synonym: PPA1688

Alternate gene names: NA

Gene position: 1841201-1840182 (Counterclockwise)

Preceding gene: 50843151

Following gene: 50843149

Centisome position: 71.91

GC content: 64.02

Gene sequence:

>1020_bases
GTGACTTTCGACGATTCGCGTCTCGACGCGCCTCTTGACGCACTCGCCGAGCGGGTGCTGCGTCAGTTGGCTAGCACGGG
AGCGCGCATTCGTCGTGACTCTGCGGATCTCGGCGAGGTACGTCGAACGGTCGGTGAGTGGGGACAGCCCCGGGGGGTAC
TCGTTGTCGGCCCCGAGGCTCGTTTAGTGCGGTCTGTCCTTGAGCCGATATGTCCCGTCCCGCTAGTCGCGTGGCCTTTC
CTGCGGCTGCCAGCGTGGGTTGGCCCCCTTGATCTTGTCGTCGCCCTCGATAGCGATGGACGGTGTGCGGCCCAGGTAGC
TGAGGCCCGACGTCGAGGTAGTGCCATCATCTTGGCGTCCAGTGGCGAGACCGAGGCTTGGCAAGCTGCCGGTAGCCACG
GCACTGCCCGTATTCAGATGGCCTCCGAGGATGCTATGTCGGCCGCTGTCGCGGCTCTGTCGGTGCTGAGCGACCTGGGT
CTTGGACCAGTTGTCGATCCCGGGCAGGTTGCTCGGGTTGCGGATATGGTTGCCGAGTCGGCTTCGCCCCACCATGACCT
CGCCGTCAACGAGGCTAAGGATCTCGCGTGTGCGTTAGCCGATGCAGAGCCCCTCTTGTGGGGTGGTTCTGTCCTTGCGG
CGCGGGCATCGCGACGCCTCGCACAATGGATGAGGCGAGCCACGGGTCGTATCGCCTTGTCCGCCGACTCCGCAGCGCTG
CGTCCTGTCATTGATTCTGCTCCTAGGAGGGATCCCTTCGCTGATCCTGACCTTGACGGTGAGACGCGTCGCCCTGTCCT
TGTCGTCATGGATGACGCCGAGACTGAGCACGCCGCTGCCCGCCGCGACCTTGAGCAGCTGTGCGCCGCCCATGATGTGA
CGGTGCGCAGCGTCACCTTGCCGCTCGGCATTGATGAGCAGTCCTCGCCGATGAGCCGCTATGTCGCCTTGCTACTCCAG
GGAAGTTTCGCCGCTGTCTACGTGGCTCTCGGACTGGATCGTCTGAAAGAGATGACATGA

Upstream 100 bases:

>100_bases
TTCGCCTTGACGCGGCGCGTAAGCGAGAAACTGGTCAGGGGGTCACTGCCGAGGACACCGAAGCTTTTGAGCCCACTCAT
CGTCATGAGATGAGGCCGCA

Downstream 100 bases:

>100_bases
GCCAAGCGCACGCTGCCCAGCGGCCGAACGGGGCCAAGGAGCCAGCCAACCCGACGCAGGGAGGCCGCAAAGCGATCATC
GCAGCTGCCTCCGCCAACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MTFDDSRLDAPLDALAERVLRQLASTGARIRRDSADLGEVRRTVGEWGQPRGVLVVGPEARLVRSVLEPICPVPLVAWPF
LRLPAWVGPLDLVVALDSDGRCAAQVAEARRRGSAIILASSGETEAWQAAGSHGTARIQMASEDAMSAAVAALSVLSDLG
LGPVVDPGQVARVADMVAESASPHHDLAVNEAKDLACALADAEPLLWGGSVLAARASRRLAQWMRRATGRIALSADSAAL
RPVIDSAPRRDPFADPDLDGETRRPVLVVMDDAETEHAAARRDLEQLCAAHDVTVRSVTLPLGIDEQSSPMSRYVALLLQ
GSFAAVYVALGLDRLKEMT

Sequences:

>Translated_339_residues
MTFDDSRLDAPLDALAERVLRQLASTGARIRRDSADLGEVRRTVGEWGQPRGVLVVGPEARLVRSVLEPICPVPLVAWPF
LRLPAWVGPLDLVVALDSDGRCAAQVAEARRRGSAIILASSGETEAWQAAGSHGTARIQMASEDAMSAAVAALSVLSDLG
LGPVVDPGQVARVADMVAESASPHHDLAVNEAKDLACALADAEPLLWGGSVLAARASRRLAQWMRRATGRIALSADSAAL
RPVIDSAPRRDPFADPDLDGETRRPVLVVMDDAETEHAAARRDLEQLCAAHDVTVRSVTLPLGIDEQSSPMSRYVALLLQ
GSFAAVYVALGLDRLKEMT
>Mature_338_residues
TFDDSRLDAPLDALAERVLRQLASTGARIRRDSADLGEVRRTVGEWGQPRGVLVVGPEARLVRSVLEPICPVPLVAWPFL
RLPAWVGPLDLVVALDSDGRCAAQVAEARRRGSAIILASSGETEAWQAAGSHGTARIQMASEDAMSAAVAALSVLSDLGL
GPVVDPGQVARVADMVAESASPHHDLAVNEAKDLACALADAEPLLWGGSVLAARASRRLAQWMRRATGRIALSADSAALR
PVIDSAPRRDPFADPDLDGETRRPVLVVMDDAETEHAAARRDLEQLCAAHDVTVRSVTLPLGIDEQSSPMSRYVALLLQG
SFAAVYVALGLDRLKEMT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36061; Mature: 35930

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFDDSRLDAPLDALAERVLRQLASTGARIRRDSADLGEVRRTVGEWGQPRGVLVVGPEA
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCHH
RLVRSVLEPICPVPLVAWPFLRLPAWVGPLDLVVALDSDGRCAAQVAEARRRGSAIILAS
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEC
SGETEAWQAAGSHGTARIQMASEDAMSAAVAALSVLSDLGLGPVVDPGQVARVADMVAES
CCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
ASPHHDLAVNEAKDLACALADAEPLLWGGSVLAARASRRLAQWMRRATGRIALSADSAAL
CCCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH
RPVIDSAPRRDPFADPDLDGETRRPVLVVMDDAETEHAAARRDLEQLCAAHDVTVRSVTL
HHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
PLGIDEQSSPMSRYVALLLQGSFAAVYVALGLDRLKEMT
ECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFDDSRLDAPLDALAERVLRQLASTGARIRRDSADLGEVRRTVGEWGQPRGVLVVGPEA
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCHH
RLVRSVLEPICPVPLVAWPFLRLPAWVGPLDLVVALDSDGRCAAQVAEARRRGSAIILAS
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEC
SGETEAWQAAGSHGTARIQMASEDAMSAAVAALSVLSDLGLGPVVDPGQVARVADMVAES
CCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
ASPHHDLAVNEAKDLACALADAEPLLWGGSVLAARASRRLAQWMRRATGRIALSADSAAL
CCCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH
RPVIDSAPRRDPFADPDLDGETRRPVLVVMDDAETEHAAARRDLEQLCAAHDVTVRSVTL
HHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
PLGIDEQSSPMSRYVALLLQGSFAAVYVALGLDRLKEMT
ECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA