Click here to switch to the map view.

The map label for this gene is 50843149

Identifier: 50843149

GI number: 50843149

Start: 1839154

End: 1840185

Strand: Reverse

Name: 50843149

Synonym: PPA1687

Alternate gene names: NA

Gene position: 1840185-1839154 (Counterclockwise)

Preceding gene: 50843150

Following gene: 50843148

Centisome position: 71.87

GC content: 57.85

Gene sequence:

>1032_bases
ATGAGCCAAGCGCACGCTGCCCAGCGGCCGAACGGGGCCAAGGAGCCAGCCAACCCGACGCAGGGAGGCCGCAAAGCGAT
CATCGCAGCTGCCTCCGCCAACCTTGCGATCGCGGTAACGAAGGCCATTGCATGGGCACTTACTGGGGCCTCGTCGATGC
TCGCCGAGGCTATCCATTCGGTGGCTGATACCGCCAACCAGGTCGTTCTCATGATGGGTGGCAAGGAGTCCCACAAGGAA
GCTGACGAGGACCACCCCTTCGGCTATGAGACGGCGCGGTACTTGTCTGGTTTCATTGTCGCTATCGTCATCTTCACCCT
TGGTGGTCTGTTTGCCCTGTATGAGGCCTATCACAAGATCGGCGCGACTCTTGGTGGTCATCCCGATGAGCTCCTCGATT
CCCAGTGGTGGTGGGTGCCGCTGGCAGTCGTCATGATTTCTCTTTGCGCAGAGGGAGCTAGTCTGCGTACCGCTCTCAAG
GAGAGTAGCCAGGACCGCGAAGGCATGACGATTTTGCAGTACATCCGGAAGGCTAAGGCCCCGGAGCTTCCGGTCGTCAT
GTTGGAGGACTCTGCTGCCGTTCTTGGTTTGATTTTTGCTTTCTTGGGTGTTGGCCTCACCCTGCTCACCCATAACCCGA
TTTTCGACGGCATTGGCTCGGCTTGTATCGGTATTTTGCTGGTCGTTGTCGCAGGGGTGCTTTCGCGCGAGATGAAATCT
CTGTTGGAGGGGGAATCAGCTGCCCCGGAGTCACGTAAGGCCGTCTATGACGCCTTGATACATTCTGACGGAGTTGACTC
GGTAATCTATATGAAGACGGTTCACCTGGGTCCTGAGACGATCTTGTTGGCCGCCAAGATCGCGGTTGATCCGACGGATT
CCGCCTTCGAGGTCGCGCGCATTATCGATAACGCCGAGGCGTCGGTCCGCGCCGCTGAGCCGTTGGTTGGTCCGCTATTC
CTTGAGCCCGATATCCGTTATGGGGATAAGCGCATTAAAGACGGGGAGGAAAGACCGGAGGATCAGTCATGA

Upstream 100 bases:

>100_bases
AGCAGTCCTCGCCGATGAGCCGCTATGTCGCCTTGCTACTCCAGGGAAGTTTCGCCGCTGTCTACGTGGCTCTCGGACTG
GATCGTCTGAAAGAGATGAC

Downstream 100 bases:

>100_bases
GCAAGCAGATTTTGGTTCTCAACGGCCCGAATTTAGGTCGGCTTGGTCGACGGGAGCCACAGATTTATGGGACGACCACC
CATGACGATTTAGCGGCCCG

Product: cation transport protein

Products: NA

Alternate protein names: Cation Efflux Family Protein; Cation Transporter; Cation Efflux Protein; Integral Membrane Protein; Membrane Transporter; Co/Zn/Cd Cation Transporter; Cation Diffusion Facilitator Family Protein; Cation Efflux System Protein; CDF Family Transporter; Cation-Efflux Pump; Cation Transporter Permease Component; Cation Efflux Transporter; CDF Family Heavy Metal/H(+) Antiporter; Zinc/Cadmium/Cations Transporter; CDF Family Cation Efflux Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; Cation Transporter Protein; Cation Efflux System

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSQAHAAQRPNGAKEPANPTQGGRKAIIAAASANLAIAVTKAIAWALTGASSMLAEAIHSVADTANQVVLMMGGKESHKE
ADEDHPFGYETARYLSGFIVAIVIFTLGGLFALYEAYHKIGATLGGHPDELLDSQWWWVPLAVVMISLCAEGASLRTALK
ESSQDREGMTILQYIRKAKAPELPVVMLEDSAAVLGLIFAFLGVGLTLLTHNPIFDGIGSACIGILLVVVAGVLSREMKS
LLEGESAAPESRKAVYDALIHSDGVDSVIYMKTVHLGPETILLAAKIAVDPTDSAFEVARIIDNAEASVRAAEPLVGPLF
LEPDIRYGDKRIKDGEERPEDQS

Sequences:

>Translated_343_residues
MSQAHAAQRPNGAKEPANPTQGGRKAIIAAASANLAIAVTKAIAWALTGASSMLAEAIHSVADTANQVVLMMGGKESHKE
ADEDHPFGYETARYLSGFIVAIVIFTLGGLFALYEAYHKIGATLGGHPDELLDSQWWWVPLAVVMISLCAEGASLRTALK
ESSQDREGMTILQYIRKAKAPELPVVMLEDSAAVLGLIFAFLGVGLTLLTHNPIFDGIGSACIGILLVVVAGVLSREMKS
LLEGESAAPESRKAVYDALIHSDGVDSVIYMKTVHLGPETILLAAKIAVDPTDSAFEVARIIDNAEASVRAAEPLVGPLF
LEPDIRYGDKRIKDGEERPEDQS
>Mature_342_residues
SQAHAAQRPNGAKEPANPTQGGRKAIIAAASANLAIAVTKAIAWALTGASSMLAEAIHSVADTANQVVLMMGGKESHKEA
DEDHPFGYETARYLSGFIVAIVIFTLGGLFALYEAYHKIGATLGGHPDELLDSQWWWVPLAVVMISLCAEGASLRTALKE
SSQDREGMTILQYIRKAKAPELPVVMLEDSAAVLGLIFAFLGVGLTLLTHNPIFDGIGSACIGILLVVVAGVLSREMKSL
LEGESAAPESRKAVYDALIHSDGVDSVIYMKTVHLGPETILLAAKIAVDPTDSAFEVARIIDNAEASVRAAEPLVGPLFL
EPDIRYGDKRIKDGEERPEDQS

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI57164948, Length=272, Percent_Identity=33.4558823529412, Blast_Score=145, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI115534117, Length=278, Percent_Identity=32.3741007194245, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24653143, Length=252, Percent_Identity=34.9206349206349, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24653141, Length=252, Percent_Identity=34.9206349206349, Blast_Score=132, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36481; Mature: 36350

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAHAAQRPNGAKEPANPTQGGRKAIIAAASANLAIAVTKAIAWALTGASSMLAEAIHS
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
VADTANQVVLMMGGKESHKEADEDHPFGYETARYLSGFIVAIVIFTLGGLFALYEAYHKI
HHHCCCCEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GATLGGHPDELLDSQWWWVPLAVVMISLCAEGASLRTALKESSQDREGMTILQYIRKAKA
HHHCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCC
PELPVVMLEDSAAVLGLIFAFLGVGLTLLTHNPIFDGIGSACIGILLVVVAGVLSREMKS
CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEGESAAPESRKAVYDALIHSDGVDSVIYMKTVHLGPETILLAAKIAVDPTDSAFEVAR
HHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHEEEEEEEEECCCCHHHHHHH
IIDNAEASVRAAEPLVGPLFLEPDIRYGDKRIKDGEERPEDQS
HHHCCHHHHHHHCCCCCCEEECCCCCCCCHHCCCCCCCCCCCC
>Mature Secondary Structure 
SQAHAAQRPNGAKEPANPTQGGRKAIIAAASANLAIAVTKAIAWALTGASSMLAEAIHS
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
VADTANQVVLMMGGKESHKEADEDHPFGYETARYLSGFIVAIVIFTLGGLFALYEAYHKI
HHHCCCCEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GATLGGHPDELLDSQWWWVPLAVVMISLCAEGASLRTALKESSQDREGMTILQYIRKAKA
HHHCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCC
PELPVVMLEDSAAVLGLIFAFLGVGLTLLTHNPIFDGIGSACIGILLVVVAGVLSREMKS
CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEGESAAPESRKAVYDALIHSDGVDSVIYMKTVHLGPETILLAAKIAVDPTDSAFEVAR
HHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHEEEEEEEEECCCCHHHHHHH
IIDNAEASVRAAEPLVGPLFLEPDIRYGDKRIKDGEERPEDQS
HHHCCHHHHHHHCCCCCCEEECCCCCCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA