Click here to switch to the map view.

The map label for this gene is 50843118

Identifier: 50843118

GI number: 50843118

Start: 1807281

End: 1807877

Strand: Reverse

Name: 50843118

Synonym: PPA1652

Alternate gene names: NA

Gene position: 1807877-1807281 (Counterclockwise)

Preceding gene: 50843123

Following gene: 50843117

Centisome position: 70.61

GC content: 61.47

Gene sequence:

>597_bases
ATGATCGACGTCGACGCATTGGTGAGCCGTGGTGTCGATGGGTTAGAGGTGCCTAACGGCCATGCTATTCACCCGTTGCT
TCAGCCGCTCTTTCCTGGTGGGCTTATGCCTGCGGTGTACCGATTAGACGGGGCGTCTTCGGTTGGGCTGGGATTGCTCA
CCCACGGCTGGTGTGGGGTGGTAGGCCTGCCCGAGTTGAGCGTCGAGGCGGCGCGGCAGTGGGGAGTCGAGCTGTCCCGG
TTGGTGCTCGTGCCAGATCCAGGGAACTGGCTCGAGACGGTAGCTACCCTCATTGAGGGGCTCGATGTTGTCCTCGCTGT
AGCTCCGCCACCGCTGCCGATGACAGCGGGAAGACGATTAACGGCTCGGTTGCGTTCCCGAGGTTCAACTCTGGTAGTGC
TGGGGCCGTGGCCCAAACCGGCTGCTCGAATCGATGTACGCACGATCGGTTGGCGGGGCCTCGGGCAGGGGTATGGCTGT
CTATCAGCCCAAGAACTTGAGGTAACGGTGGTCAGGCACCACCACAATCGTTCAGTGAGGTTAGTTCGCACTGGTGCTGG
GGTGCACTCTGCCAAGGAGAGGGCGGATGTTTGCTGA

Upstream 100 bases:

>100_bases
CTGTTGTTCTGGAGACCCATCGGTAAAGCTGTCGGGCACGCGTGTCACGGTGATTCTCGTCAGTTTTCGGAAGGTTGCTG
GATGTCGGACAGGGGGTGCG

Downstream 100 bases:

>100_bases
ACGACTGAGCCCCTTCCCAGTCCGGGTCCTCTTGATGGTGATCCCACAGTGGCGGATTGTGGCCGCATCTCGGCTTCACC
CTGGTGACGCCCCGCTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MIDVDALVSRGVDGLEVPNGHAIHPLLQPLFPGGLMPAVYRLDGASSVGLGLLTHGWCGVVGLPELSVEAARQWGVELSR
LVLVPDPGNWLETVATLIEGLDVVLAVAPPPLPMTAGRRLTARLRSRGSTLVVLGPWPKPAARIDVRTIGWRGLGQGYGC
LSAQELEVTVVRHHHNRSVRLVRTGAGVHSAKERADVC

Sequences:

>Translated_198_residues
MIDVDALVSRGVDGLEVPNGHAIHPLLQPLFPGGLMPAVYRLDGASSVGLGLLTHGWCGVVGLPELSVEAARQWGVELSR
LVLVPDPGNWLETVATLIEGLDVVLAVAPPPLPMTAGRRLTARLRSRGSTLVVLGPWPKPAARIDVRTIGWRGLGQGYGC
LSAQELEVTVVRHHHNRSVRLVRTGAGVHSAKERADVC
>Mature_198_residues
MIDVDALVSRGVDGLEVPNGHAIHPLLQPLFPGGLMPAVYRLDGASSVGLGLLTHGWCGVVGLPELSVEAARQWGVELSR
LVLVPDPGNWLETVATLIEGLDVVLAVAPPPLPMTAGRRLTARLRSRGSTLVVLGPWPKPAARIDVRTIGWRGLGQGYGC
LSAQELEVTVVRHHHNRSVRLVRTGAGVHSAKERADVC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21062; Mature: 21062

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDVDALVSRGVDGLEVPNGHAIHPLLQPLFPGGLMPAVYRLDGASSVGLGLLTHGWCGV
CCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHEEECCCCCCCHHHHHCCCCCC
VGLPELSVEAARQWGVELSRLVLVPDPGNWLETVATLIEGLDVVLAVAPPPLPMTAGRRL
CCCCCHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHH
TARLRSRGSTLVVLGPWPKPAARIDVRTIGWRGLGQGYGCLSAQELEVTVVRHHHNRSVR
HHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEE
LVRTGAGVHSAKERADVC
EEEECCCCCHHHHHCCCC
>Mature Secondary Structure
MIDVDALVSRGVDGLEVPNGHAIHPLLQPLFPGGLMPAVYRLDGASSVGLGLLTHGWCGV
CCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHEEECCCCCCCHHHHHCCCCCC
VGLPELSVEAARQWGVELSRLVLVPDPGNWLETVATLIEGLDVVLAVAPPPLPMTAGRRL
CCCCCHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHH
TARLRSRGSTLVVLGPWPKPAARIDVRTIGWRGLGQGYGCLSAQELEVTVVRHHHNRSVR
HHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEE
LVRTGAGVHSAKERADVC
EEEECCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA