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The map label for this gene is 50843117

Identifier: 50843117

GI number: 50843117

Start: 1805699

End: 1807291

Strand: Reverse

Name: 50843117

Synonym: PPA1651

Alternate gene names: NA

Gene position: 1807291-1805699 (Counterclockwise)

Preceding gene: 50843118

Following gene: 50843116

Centisome position: 70.59

GC content: 61.27

Gene sequence:

>1593_bases
ATGTTTGCTGAACGACTGAGCCCCTTCCCAGTCCGGGTCCTCTTGATGGTGATCCCACAGTGGCGGATTGTGGCCGCATC
TCGGCTTCACCCTGGTGACGCCCCGCTTATGATTGCTGACCGTGGTGTAGTCATCGACTGTTGCGCACGTGCGGCCGAGG
AAGGTGTGATTCCCGGCCTGCGGGTGCGAGCGGCCCAGTTACGCTGTCCCGAGGGCGTTGTGGTGCCTTACGATTCTGCC
TCTGAGGAGGTCCTCTTTGACGAGGTGGTCCGTGAGATCGAAAAGTCCGTGGCCCCTTCAGTCCACGTAGTGCGACCAGG
TGTGGCTGCGGTAGCAGCTCGCGGTGTAGCTCGTTTCTATGGCGATGAGGTTGCTGCTGCTGAGCGTATGGTCAATGTCT
TGACCCATATTGGATATTCCCACGTGGGGGTATCGGTAGCTGACGGTCTATTCGCTGCCGAGGTGGCGGCTACCGACAAT
AGCGGTGAGGGGAAACGGGCCCCCGTCTTTCTCGCCTCAGGAACATCTCGAGCTTTCTTGGCTCCCTACGACGTCTCGGT
GTTGGCTCGCACAGGACGGGCCGATGGGGAATTGGTGCGAACTTTGCGCCAACTCGGTCTGACGACAATGGGCGCCTTCG
CTGATCTAGATCGTCAACACGTCGTGCAGCGGTTTGCTGGTGCCGGTCAGCGTGCTCATGACTGGGCCCGGGGGATGGAC
GTCACAATGTTGTCGTCTCGACGTCCCCAGGATGACGACGCTATGGAGGTCGTCTTTGATGACCCGGAGCCTTCTGGTGC
TCAGGTTGTTGCCAAGGTACGTCCGGTGGTGGAGGAATTTATGACACGTCTGGCAGAGACCGGGCGGGTGTGCTCCCAGG
TCCGCATTTTGTTGCGAGCTACTACCGGTTTCTCCGAGCACACCTGGCGTCAGCCTTGGCAGTTCAGCGGTGACGATCTG
CTAGCGCGATTGTCGCGTCAACTTAGTGACCTTCCGCGTGGTACCGACGAGTTTGGTGCTGACGAGTTCTGTCAATCAGG
CGTACAGGCGGTGCGCATCGTTCCCACCATCCATCGCGCGGGGGAAGCTGCTGAAGGGCTGTTTGGTGCCAGGCCCACTG
AGCACCTCGTCCACGTCATCTCTCAGTTGCAGGAGAGGCTGGGCCCTGAGGGGGTCTTGGTGGGGGAGGTCGCCGGTGGC
CGGATGCTCAAGGATCGACGCCGACTCGTCCCCTTTGGGACGGTTGTTGAAAATGCTCGCCCGGTGGATCGTCCCTGGCC
CGGTCACTTAGATGGCCCGGCCCCCGGGATCGTGTACTCCCGCCCCCTGCCGGCCCGGTTAGAGACGACGGATGGTATGC
CTCTAACGACCTCCTCGGATTTGCCCACTATTACTCCTGGGTGGTTCCACGACGGCACGTCGCGGCGGCGTGTTATCGCG
TGGGCAGGGCCATGGCCGGTACACCAGAGGTGGTGGAGTACCCCGACCGTTTCAGTGGAAAGGGTGCAACTGATCACCGA
GGATCAACAGGCCTGGGTGTTGGCAGGGTCGGCTGACCGCTGGTGGATCGAGGCTCGATACGACGAGGCGTGA

Upstream 100 bases:

>100_bases
GCCCAAGAACTTGAGGTAACGGTGGTCAGGCACCACCACAATCGTTCAGTGAGGTTAGTTCGCACTGGTGCTGGGGTGCA
CTCTGCCAAGGAGAGGGCGG

Downstream 100 bases:

>100_bases
TTGCGGTGAGCTATCACAATCCGCCAATTCCTTGGCGTGAACTAGAAGGACGTATTTCTGGGAGACCTGCTCCCCATGGT
CACCAGGAGAGCCACGCTGA

Product: DNA repair nucleotidyltransferase/DNA polymerase

Products: NA

Alternate protein names: DNA Polymerase Involved In DNA Repair; DNA-Repair Protein; DNA Polymerase; DNA Repair Polymerase; UMUC Domain Protein DNA-Repair Protein; DNA Repair Nucleotidyltransferase/DNA Polymerase; UMUC Domain-Containing Protein DNA-Repair Protein

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MFAERLSPFPVRVLLMVIPQWRIVAASRLHPGDAPLMIADRGVVIDCCARAAEEGVIPGLRVRAAQLRCPEGVVVPYDSA
SEEVLFDEVVREIEKSVAPSVHVVRPGVAAVAARGVARFYGDEVAAAERMVNVLTHIGYSHVGVSVADGLFAAEVAATDN
SGEGKRAPVFLASGTSRAFLAPYDVSVLARTGRADGELVRTLRQLGLTTMGAFADLDRQHVVQRFAGAGQRAHDWARGMD
VTMLSSRRPQDDDAMEVVFDDPEPSGAQVVAKVRPVVEEFMTRLAETGRVCSQVRILLRATTGFSEHTWRQPWQFSGDDL
LARLSRQLSDLPRGTDEFGADEFCQSGVQAVRIVPTIHRAGEAAEGLFGARPTEHLVHVISQLQERLGPEGVLVGEVAGG
RMLKDRRRLVPFGTVVENARPVDRPWPGHLDGPAPGIVYSRPLPARLETTDGMPLTTSSDLPTITPGWFHDGTSRRRVIA
WAGPWPVHQRWWSTPTVSVERVQLITEDQQAWVLAGSADRWWIEARYDEA

Sequences:

>Translated_530_residues
MFAERLSPFPVRVLLMVIPQWRIVAASRLHPGDAPLMIADRGVVIDCCARAAEEGVIPGLRVRAAQLRCPEGVVVPYDSA
SEEVLFDEVVREIEKSVAPSVHVVRPGVAAVAARGVARFYGDEVAAAERMVNVLTHIGYSHVGVSVADGLFAAEVAATDN
SGEGKRAPVFLASGTSRAFLAPYDVSVLARTGRADGELVRTLRQLGLTTMGAFADLDRQHVVQRFAGAGQRAHDWARGMD
VTMLSSRRPQDDDAMEVVFDDPEPSGAQVVAKVRPVVEEFMTRLAETGRVCSQVRILLRATTGFSEHTWRQPWQFSGDDL
LARLSRQLSDLPRGTDEFGADEFCQSGVQAVRIVPTIHRAGEAAEGLFGARPTEHLVHVISQLQERLGPEGVLVGEVAGG
RMLKDRRRLVPFGTVVENARPVDRPWPGHLDGPAPGIVYSRPLPARLETTDGMPLTTSSDLPTITPGWFHDGTSRRRVIA
WAGPWPVHQRWWSTPTVSVERVQLITEDQQAWVLAGSADRWWIEARYDEA
>Mature_530_residues
MFAERLSPFPVRVLLMVIPQWRIVAASRLHPGDAPLMIADRGVVIDCCARAAEEGVIPGLRVRAAQLRCPEGVVVPYDSA
SEEVLFDEVVREIEKSVAPSVHVVRPGVAAVAARGVARFYGDEVAAAERMVNVLTHIGYSHVGVSVADGLFAAEVAATDN
SGEGKRAPVFLASGTSRAFLAPYDVSVLARTGRADGELVRTLRQLGLTTMGAFADLDRQHVVQRFAGAGQRAHDWARGMD
VTMLSSRRPQDDDAMEVVFDDPEPSGAQVVAKVRPVVEEFMTRLAETGRVCSQVRILLRATTGFSEHTWRQPWQFSGDDL
LARLSRQLSDLPRGTDEFGADEFCQSGVQAVRIVPTIHRAGEAAEGLFGARPTEHLVHVISQLQERLGPEGVLVGEVAGG
RMLKDRRRLVPFGTVVENARPVDRPWPGHLDGPAPGIVYSRPLPARLETTDGMPLTTSSDLPTITPGWFHDGTSRRRVIA
WAGPWPVHQRWWSTPTVSVERVQLITEDQQAWVLAGSADRWWIEARYDEA

Specific function: Unknown

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58031; Mature: 58031

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAERLSPFPVRVLLMVIPQWRIVAASRLHPGDAPLMIADRGVVIDCCARAAEEGVIPGL
CCCCCCCCCHHHHHHHHCCCHHEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCC
RVRAAQLRCPEGVVVPYDSASEEVLFDEVVREIEKSVAPSVHVVRPGVAAVAARGVARFY
CEEHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH
GDEVAAAERMVNVLTHIGYSHVGVSVADGLFAAEVAATDNSGEGKRAPVFLASGTSRAFL
HHHHHHHHHHHHHHHHCCHHHCCHHHHCCHHEEHEEECCCCCCCCCCCEEEECCCCCEEE
APYDVSVLARTGRADGELVRTLRQLGLTTMGAFADLDRQHVVQRFAGAGQRAHDWARGMD
CCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHCCCC
VTMLSSRRPQDDDAMEVVFDDPEPSGAQVVAKVRPVVEEFMTRLAETGRVCSQVRILLRA
EEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTGFSEHTWRQPWQFSGDDLLARLSRQLSDLPRGTDEFGADEFCQSGVQAVRIVPTIHRA
CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHEEEEHHHHHHC
GEAAEGLFGARPTEHLVHVISQLQERLGPEGVLVGEVAGGRMLKDRRRLVPFGTVVENAR
CCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCHHHHHCCCC
PVDRPWPGHLDGPAPGIVYSRPLPARLETTDGMPLTTSSDLPTITPGWFHDGTSRRRVIA
CCCCCCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
WAGPWPVHQRWWSTPTVSVERVQLITEDQQAWVLAGSADRWWIEARYDEA
ECCCCCHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCC
>Mature Secondary Structure
MFAERLSPFPVRVLLMVIPQWRIVAASRLHPGDAPLMIADRGVVIDCCARAAEEGVIPGL
CCCCCCCCCHHHHHHHHCCCHHEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCC
RVRAAQLRCPEGVVVPYDSASEEVLFDEVVREIEKSVAPSVHVVRPGVAAVAARGVARFY
CEEHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH
GDEVAAAERMVNVLTHIGYSHVGVSVADGLFAAEVAATDNSGEGKRAPVFLASGTSRAFL
HHHHHHHHHHHHHHHHCCHHHCCHHHHCCHHEEHEEECCCCCCCCCCCEEEECCCCCEEE
APYDVSVLARTGRADGELVRTLRQLGLTTMGAFADLDRQHVVQRFAGAGQRAHDWARGMD
CCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHCCCC
VTMLSSRRPQDDDAMEVVFDDPEPSGAQVVAKVRPVVEEFMTRLAETGRVCSQVRILLRA
EEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTGFSEHTWRQPWQFSGDDLLARLSRQLSDLPRGTDEFGADEFCQSGVQAVRIVPTIHRA
CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHEEEEHHHHHHC
GEAAEGLFGARPTEHLVHVISQLQERLGPEGVLVGEVAGGRMLKDRRRLVPFGTVVENAR
CCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCHHHHHCCCC
PVDRPWPGHLDGPAPGIVYSRPLPARLETTDGMPLTTSSDLPTITPGWFHDGTSRRRVIA
CCCCCCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
WAGPWPVHQRWWSTPTVSVERVQLITEDQQAWVLAGSADRWWIEARYDEA
ECCCCCHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA